| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is fabI [H]
Identifier: 91788284
GI number: 91788284
Start: 2517450
End: 2518247
Strand: Reverse
Name: fabI [H]
Synonym: Bpro_2419
Alternate gene names: 91788284
Gene position: 2518247-2517450 (Counterclockwise)
Preceding gene: 91788297
Following gene: 91788281
Centisome position: 48.43
GC content: 62.03
Gene sequence:
>798_bases ATGGGTTTTCTTACCGGCAAAAAACTGTTGATCACGGGCGTGTTGTCCAACCGGTCCATTGCCTACGGCATAGCCAAGGC GTGCCACGCACAAGGCGCCGAACTGGCCTTCAGCTATGTCGGGGAGCGCTTCAAGGACCGCATCACGGAGTTTGCCGCCG ATTTTGGCTCCAAACTCATCTTTGACTGCGACGTCGGCGACGACGCCCAAATCGAGAAGCTGTTTGCCGACCTGGCCAAG ACCTGGCCGACGTTTGACGGCTTTGTTCACAGCATTGGCTACGCACCGCGCGAAGCCATTGCCGGCGATTTCCTCGACGG CCTCACCCGCGAGGGCTTCAAGATTGCCCACGACATCAGCGCCTACAGCTTTCCGGCCATGGCCAAGGCGGCGCTGCCCT ACCTCAACAACAAGTCGGCGCTGCTGACCCTGACCTACCTGGGCGCGGTACGTACCGTGCCCAACTACAACACCATGGGG CTGGCCAAGGCCAGCCTGGAGGCCTCGGTGCGCTACCTGGCCGAATCGCTGGGCCCCAAGGGCATGCGCGTCAACGGCAT CAGCGCCGGCCCGATCAAGACCCTGGCCGCCAGCGGCATCAAGGGCTTCGGCAAGATTCTGAGCGTCGTCGCCGAAGCCT CACCCATTCGCCGCAACGTAACGATTGAAGACGTCGGCAATGTCGCTGCGTTCTTGCTGAGTGACCTGGCTGGTGGCGTG AGCGCCGAAATCACCTACGTGGATGGTGGTTTCAGCCACGTGGTGGGCGGCATCGCCGAGCCAACCGAAGCAGGCTGA
Upstream 100 bases:
>100_bases CACGTCGGCAACGGTTGGCGGCCAGCAGGTAAGCCAGCTGCCCCATTCAATGCAACCAACCGCTATCGGCCGATCCACTC GTACACACTGGAGCACAAGC
Downstream 100 bases:
>100_bases ACGCCACGACGGCGGGCTTGGCAGCCCGACTTGCTATCATTTTGATGGCAAACGGTGCCCACGCATGTAAAGCTGAGGGC CAAATCTACTTGTCCTTGAC
Product: enoyl-[acyl-carrier-protein] reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAADFGSKLIFDCDVGDDAQIEKLFADLAK TWPTFDGFVHSIGYAPREAIAGDFLDGLTREGFKIAHDISAYSFPAMAKAALPYLNNKSALLTLTYLGAVRTVPNYNTMG LAKASLEASVRYLAESLGPKGMRVNGISAGPIKTLAASGIKGFGKILSVVAEASPIRRNVTIEDVGNVAAFLLSDLAGGV SAEITYVDGGFSHVVGGIAEPTEAG
Sequences:
>Translated_265_residues MGFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAADFGSKLIFDCDVGDDAQIEKLFADLAK TWPTFDGFVHSIGYAPREAIAGDFLDGLTREGFKIAHDISAYSFPAMAKAALPYLNNKSALLTLTYLGAVRTVPNYNTMG LAKASLEASVRYLAESLGPKGMRVNGISAGPIKTLAASGIKGFGKILSVVAEASPIRRNVTIEDVGNVAAFLLSDLAGGV SAEITYVDGGFSHVVGGIAEPTEAG >Mature_264_residues GFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAADFGSKLIFDCDVGDDAQIEKLFADLAKT WPTFDGFVHSIGYAPREAIAGDFLDGLTREGFKIAHDISAYSFPAMAKAALPYLNNKSALLTLTYLGAVRTVPNYNTMGL AKASLEASVRYLAESLGPKGMRVNGISAGPIKTLAASGIKGFGKILSVVAEASPIRRNVTIEDVGNVAAFLLSDLAGGVS AEITYVDGGFSHVVGGIAEPTEAG
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=64.2857142857143, Blast_Score=344, Evalue=3e-96, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=26.6409266409266, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 27853; Mature: 27722
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAADFGSKLI CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE FDCDVGDDAQIEKLFADLAKTWPTFDGFVHSIGYAPREAIAGDFLDGLTREGFKIAHDIS EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH AYSFPAMAKAALPYLNNKSALLTLTYLGAVRTVPNYNTMGLAKASLEASVRYLAESLGPK HHCCHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GMRVNGISAGPIKTLAASGIKGFGKILSVVAEASPIRRNVTIEDVGNVAAFLLSDLAGGV CEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCC SAEITYVDGGFSHVVGGIAEPTEAG EEEEEEECCCHHHHHCCCCCCCCCC >Mature Secondary Structure GFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAADFGSKLI CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE FDCDVGDDAQIEKLFADLAKTWPTFDGFVHSIGYAPREAIAGDFLDGLTREGFKIAHDIS EECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHH AYSFPAMAKAALPYLNNKSALLTLTYLGAVRTVPNYNTMGLAKASLEASVRYLAESLGPK HHCCHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC GMRVNGISAGPIKTLAASGIKGFGKILSVVAEASPIRRNVTIEDVGNVAAFLLSDLAGGV CEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHCCCC SAEITYVDGGFSHVVGGIAEPTEAG EEEEEEECCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]