| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788262
Identifier: 91788262
GI number: 91788262
Start: 2490355
End: 2491962
Strand: Reverse
Name: 91788262
Synonym: Bpro_2396
Alternate gene names: NA
Gene position: 2491962-2490355 (Counterclockwise)
Preceding gene: 161936269
Following gene: 91788261
Centisome position: 47.92
GC content: 63.99
Gene sequence:
>1608_bases ATGAAGCGGCATATCCGTGACAGCTATTACATCGTCGGCGAAGGAACGGTGCATTGCGATCCTAAAGGGAAACCCGTCAC CGACCCCAAGCCCGGCGACGTGCCCGAGATGCGCAAGTTCCGCTTTTCGCGCATGGGGCCCAAGGGCGCGGTCGTTAACC GGACGATTGTCGAAGGACTCGCACAAGCCATGACCGCCGAAGATGGCGGCGACTCGGCTGGTCCCGCCATCCCGGCGGGC TTCACCTATCTGGGGCAGTTCATCGACCACGACCTGACCATGGACAAGACCGCCGCCGCCTTGGGCGAAAACGTCACCAT CAACCAGTTGCTGCAGGGCCGCTCGCCGGCGCTGGATCTGGACTGCATGTACGGGCGAGGCCCCGATGACGCGGACGACG CCAGGTTCTATAGCGACGGCATCCGCATCAAGATGGGAACCACCGCGCCCACGCCATTTCCGGACGGCGGAACCAATGTT CCGCGCGACGGGTTCGATCTGCCGCGCGTGGGACAGGGGTCGACCAAACTGGCGCGCCGCGCCGCGCTGATCCCCGATCA CCGCAACGATGAAAACCTGGTCGTCGCGCAAACCCACCTGGCCATGATCCGCTTTCACAACCGCGTGGTGAACCACATTG CGCCGACCACGCCGAGCGCCGACCTGTTCAAGCGCGCGCGCGAGCTGGTCGTCAAGCACTACCAATGGATGATCAAGACC GATTTTCTGCCGCGAATCGTGGACCCGGCCATCGTGCAGGACGTGTTCACCAATGGCCGCAAGTTCTTCGAAAAGGATGC GACGCCCGAGCATATGCCGACGATGCCGATCGAGTTCTCGGTGGCCGCCTACCGGCTCGGCCACAGCATGATCCGTGGCG CGTACCAGTGGAACCGCGTTTTCAAGTCGGGCGGGCCGGGGCCGATTGCCTCGCTGGAACTGCTGTTCACCTTCTCTGGC ACAAGCGGCATCCTGTCGCCCGATGGCAACCTGAACGACCGCGAATCGGGCAGCTTCGAAAGGTTGCCGACCAACTGGAT CGCTGATTTCCGTCGCCTGTACAACTTCAACGAGGTGGGCCGTGCCGATCTCACGCCGCCCGAAGGCGCGCCCAACGTCA CCAAGAAGATCGACACCCAGCTGGTGGATCCGCTCAAGACGTTGCCGTTCGGTTCGCTCGGCGGCTCGGCCGCGACACCC GCGATCGAGCTGAACCTGGCGTTTCGTAACCTGCAGCGCGCCAATATGGTCGAGCTGGCCAGCGGCCAGCAGATGGCCGC GCTCCTGGAGGTGGCGCCGCTAACCTCGGCGCAGCTGAGCAAGGGCTTGCCGGTGGCCCTCAAGGACGCCGCCACCAACA CCCCGTTGTGGTACTACATCCTGCGCGAGGCCGAGCTAAACAATGGCCGCCTGACCGGTGTCGGCGGCAGGATCGCGGCC GAAACCTTCCATCGAGCCATGGAGGGCAGCGAGCACTCAATCGTGCGCGACCCCGCTTTCCGGCCCACGGCGCTGGTTAC AAACCCGGGCGACCGGTTCAACATGACGGACTTGCTGCTTTTCGCCTTTGAAGGCCGGGCAGACCTGCTCAATCCCCTTG GCGACTGA
Upstream 100 bases:
>100_bases CTTACCAGGAATTGCGCACCCCCTCATCCATTCGGATGATGACAGATAACGTGCTGCGGCTTACCTTTGCGCCTCATGGG TTAACACCAGGAGGAACATC
Downstream 100 bases:
>100_bases GCTGCGACTGAACTGCCTTACCCTCGACCAGTGCCTGCGCGCGCCGCGCAGGCACCGCGTTGCCATCGCCCCGAGGCGTT GCCATGCTACTGACTTTTGG
Product: heme peroxidase
Products: NA
Alternate protein names: Animal Heme Peroxidase; Peroxidase Family Protein; Myeloperoxidase Thyroid Peroxidase-Like Protein; Animal Haem Peroxidase Superfamily; Ovoperoxidase; Peroxidase
Number of amino acids: Translated: 535; Mature: 535
Protein sequence:
>535_residues MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGLAQAMTAEDGGDSAGPAIPAG FTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDLDCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNV PRDGFDLPRVGQGSTKLARRAALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRVFKSGGPGPIASLELLFTFSG TSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVGRADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATP AIELNLAFRNLQRANMVELASGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD
Sequences:
>Translated_535_residues MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGLAQAMTAEDGGDSAGPAIPAG FTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDLDCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNV PRDGFDLPRVGQGSTKLARRAALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRVFKSGGPGPIASLELLFTFSG TSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVGRADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATP AIELNLAFRNLQRANMVELASGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD >Mature_535_residues MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGLAQAMTAEDGGDSAGPAIPAG FTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDLDCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNV PRDGFDLPRVGQGSTKLARRAALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRVFKSGGPGPIASLELLFTFSG TSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVGRADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATP AIELNLAFRNLQRANMVELASGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58566; Mature: 58566
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50292 PEROXIDASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGL CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH AQAMTAEDGGDSAGPAIPAGFTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDL HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCCEEE DCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNVPRDGFDLPRVGQGSTKLARR EEECCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRV CCHHHHHCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH FKSGGPGPIASLELLFTFSGTSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVG HHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATPAIELNLAFRNLQRANMVELA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHHC SGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA CCHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCEEECCCCHHHH ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD HHHHHHHCCCCCCEECCCCCCCEEEEECCCCCCCHHHEEEEEECCCHHHHHCCCC >Mature Secondary Structure MKRHIRDSYYIVGEGTVHCDPKGKPVTDPKPGDVPEMRKFRFSRMGPKGAVVNRTIVEGL CCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH AQAMTAEDGGDSAGPAIPAGFTYLGQFIDHDLTMDKTAAALGENVTINQLLQGRSPALDL HHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCCCCEEE DCMYGRGPDDADDARFYSDGIRIKMGTTAPTPFPDGGTNVPRDGFDLPRVGQGSTKLARR EEECCCCCCCCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH AALIPDHRNDENLVVAQTHLAMIRFHNRVVNHIAPTTPSADLFKRARELVVKHYQWMIKT HHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH DFLPRIVDPAIVQDVFTNGRKFFEKDATPEHMPTMPIEFSVAAYRLGHSMIRGAYQWNRV CCHHHHHCHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHH FKSGGPGPIASLELLFTFSGTSGILSPDGNLNDRESGSFERLPTNWIADFRRLYNFNEVG HHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RADLTPPEGAPNVTKKIDTQLVDPLKTLPFGSLGGSAATPAIELNLAFRNLQRANMVELA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCHHHHC SGQQMAALLEVAPLTSAQLSKGLPVALKDAATNTPLWYYILREAELNNGRLTGVGGRIAA CCHHHHHHHHHCCCCHHHHHCCCCEEEECCCCCCCEEEEEEEEEECCCCEEECCCCHHHH ETFHRAMEGSEHSIVRDPAFRPTALVTNPGDRFNMTDLLLFAFEGRADLLNPLGD HHHHHHHCCCCCCEECCCCCCCEEEEECCCCCCCHHHEEEEEECCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA