| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788253
Identifier: 91788253
GI number: 91788253
Start: 2478020
End: 2478841
Strand: Direct
Name: 91788253
Synonym: Bpro_2386
Alternate gene names: NA
Gene position: 2478020-2478841 (Clockwise)
Preceding gene: 91788252
Following gene: 91788254
Centisome position: 47.65
GC content: 69.71
Gene sequence:
>822_bases ATGCTTTCTCCGATTCCTGTGGCCCGCGCCGTGCCGGACCTCGCCCACGTGTGGCGCGCGGGCGAGCTGGGCAGCGCGAG CCTGCAGACCGTGGACACGGGCTATGCGGCGCTCAACCATGTGTTGCCCGGCGGCGGTTGGCCGCAGGGTGCGCTGGTGG AAGTGCTGCAGCCGCAGGCCGGGCTGCACGAATGGGGTTTGGTCGTGCCGGCCCTGGCTTGCGTGCAGGCGGCGGCGCCT GATTTGTTGACGGTGCTGGTGGGCGCGCCCTGGCTGCCCTTTGGCCCGGCCTTGGGCGCGCGCCAGTTGAATATGCAGCG CCTGCTCAGCATTCACGGCAAGCCTGGTGACGCGCCGTCGCTGCTGTGGGCCACGCGCGAAGCCTTGCAGTGCGCCGACG TGCACAGCGTGCTGGCCTGGCTGCCCGATGCGCGCAGCGCGCATGTGCGCCGCCTGCAGATTGCGGCCCATGCGCACAAC AAGCTGCTGTTTGTCTTCAGGCCACTGCGGGCGCAGCATGAGTCGTCGCCCGCGCCGCTGCGTTTGCTGATTGAAGGCGC GGTGAACGAGGCGGGCAAGCTGCTGGTCAGTGTGCTCAAACGCCGCGGCCCGCCTCTGGCCGCGCCAGTGCTGCTCGATA CCCGGCCGGCCCGGCTGGCGGCGCTGTTGGCCGCCAGCCGCGAAAGAGCGCGGCGCCAGCGGGAAGAAGCCGGTATTCCG GCGCCCATGCTGCAGCCTTCGCTGGTGTCGCCTCCTGTCACTTCACCTCAGGGCCCCATCCATGCGCTGCTGGATCGCAT TGCACATCTCGACCACCACTGA
Upstream 100 bases:
>100_bases AGCTGGGTGAAGGGGTAATTGCGCAGGGCGTGAGTCAGGCAATATACTGTACATAAATACAGTATTTAACTGGATTTTCA CCCCCTGATTGAGCCCACCC
Downstream 100 bases:
>100_bases GCCGGGCCTAGCCGCCCGCCCGGTGCTGGACGACGCAGTGGCGCAGCGGTTGGTACTGGACGCCGCTGCCATGCAGCGGG CGGTGGCCAGCATGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLSPIPVARAVPDLAHVWRAGELGSASLQTVDTGYAALNHVLPGGGWPQGALVEVLQPQAGLHEWGLVVPALACVQAAAP DLLTVLVGAPWLPFGPALGARQLNMQRLLSIHGKPGDAPSLLWATREALQCADVHSVLAWLPDARSAHVRRLQIAAHAHN KLLFVFRPLRAQHESSPAPLRLLIEGAVNEAGKLLVSVLKRRGPPLAAPVLLDTRPARLAALLAASRERARRQREEAGIP APMLQPSLVSPPVTSPQGPIHALLDRIAHLDHH
Sequences:
>Translated_273_residues MLSPIPVARAVPDLAHVWRAGELGSASLQTVDTGYAALNHVLPGGGWPQGALVEVLQPQAGLHEWGLVVPALACVQAAAP DLLTVLVGAPWLPFGPALGARQLNMQRLLSIHGKPGDAPSLLWATREALQCADVHSVLAWLPDARSAHVRRLQIAAHAHN KLLFVFRPLRAQHESSPAPLRLLIEGAVNEAGKLLVSVLKRRGPPLAAPVLLDTRPARLAALLAASRERARRQREEAGIP APMLQPSLVSPPVTSPQGPIHALLDRIAHLDHH >Mature_273_residues MLSPIPVARAVPDLAHVWRAGELGSASLQTVDTGYAALNHVLPGGGWPQGALVEVLQPQAGLHEWGLVVPALACVQAAAP DLLTVLVGAPWLPFGPALGARQLNMQRLLSIHGKPGDAPSLLWATREALQCADVHSVLAWLPDARSAHVRRLQIAAHAHN KLLFVFRPLRAQHESSPAPLRLLIEGAVNEAGKLLVSVLKRRGPPLAAPVLLDTRPARLAALLAASRERARRQREEAGIP APMLQPSLVSPPVTSPQGPIHALLDRIAHLDHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29115; Mature: 29115
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPIPVARAVPDLAHVWRAGELGSASLQTVDTGYAALNHVLPGGGWPQGALVEVLQPQA CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC GLHEWGLVVPALACVQAAAPDLLTVLVGAPWLPFGPALGARQLNMQRLLSIHGKPGDAPS CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH LLWATREALQCADVHSVLAWLPDARSAHVRRLQIAAHAHNKLLFVFRPLRAQHESSPAPL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCE RLLIEGAVNEAGKLLVSVLKRRGPPLAAPVLLDTRPARLAALLAASRERARRQREEAGIP EEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC APMLQPSLVSPPVTSPQGPIHALLDRIAHLDHH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLSPIPVARAVPDLAHVWRAGELGSASLQTVDTGYAALNHVLPGGGWPQGALVEVLQPQA CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC GLHEWGLVVPALACVQAAAPDLLTVLVGAPWLPFGPALGARQLNMQRLLSIHGKPGDAPS CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH LLWATREALQCADVHSVLAWLPDARSAHVRRLQIAAHAHNKLLFVFRPLRAQHESSPAPL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCE RLLIEGAVNEAGKLLVSVLKRRGPPLAAPVLLDTRPARLAALLAASRERARRQREEAGIP EEHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC APMLQPSLVSPPVTSPQGPIHALLDRIAHLDHH CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA