| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788249
Identifier: 91788249
GI number: 91788249
Start: 2474942
End: 2475454
Strand: Reverse
Name: 91788249
Synonym: Bpro_2382
Alternate gene names: NA
Gene position: 2475454-2474942 (Counterclockwise)
Preceding gene: 91788250
Following gene: 91788248
Centisome position: 47.6
GC content: 62.77
Gene sequence:
>513_bases ATGAACCTGACAAGAGGCTGGGCATGGAGGCCGGATGTCTTTGACGCATTCGCAGCGCTGCGCTCCCAACTTACCGACAA CTCTTCCCTTGGCAAGCGGGAACTGGCGGTGCTCGTATGCGCTACCGCCGCTGCGCTTGGTGACTCGTACTGCGCGCTTG CGTGGGGCAAGAAGCTTGCCGAGGCCTCGGACCCCGTGTCCGCAGCAGCCGTGCTGCAAGGCAGGGCCACAGCCGAACTC ACTTTGCGAGACCAGGCGCTGTCGGTATGGGCGCGAAAGGTCGTGACCCAGCCGAATGGAACGACCACTGAGGATGTAGC CAGACTTCGCGCTGCCGGCTTCACTGACCGGGAGATCGCCGAGGCCACCTTTTTCATAGCGTTCAGGCTTGCCTTTTCCG TCGTCAACGATGCGCTCGGAGCAGAACCGGATTGGCAGCTGGCGGCCGCGGCACCACCCGAGGTAACCGCCGCGGTCACA TTCGGACGCCCAACCGCTCTAAAAGGTACATAG
Upstream 100 bases:
>100_bases CACCATCAAGCAAGGTCACAACATGCTTATCCCTCCGCCCCCAGAATCCGAAGCGACCTCACGCGTCTACCAGTCGAGCC TTGACAGTCAGGGATTCGTG
Downstream 100 bases:
>100_bases TCGTGCCCGTCAGCCCACAGTTGCGCCGCACCCGGGGTGCCTGACCCGGGCCCATCCAGCAGCCACCTGAGGCATCGTCC TACAGAAGCAGTTTCCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MNLTRGWAWRPDVFDAFAALRSQLTDNSSLGKRELAVLVCATAAALGDSYCALAWGKKLAEASDPVSAAAVLQGRATAEL TLRDQALSVWARKVVTQPNGTTTEDVARLRAAGFTDREIAEATFFIAFRLAFSVVNDALGAEPDWQLAAAAPPEVTAAVT FGRPTALKGT
Sequences:
>Translated_170_residues MNLTRGWAWRPDVFDAFAALRSQLTDNSSLGKRELAVLVCATAAALGDSYCALAWGKKLAEASDPVSAAAVLQGRATAEL TLRDQALSVWARKVVTQPNGTTTEDVARLRAAGFTDREIAEATFFIAFRLAFSVVNDALGAEPDWQLAAAAPPEVTAAVT FGRPTALKGT >Mature_170_residues MNLTRGWAWRPDVFDAFAALRSQLTDNSSLGKRELAVLVCATAAALGDSYCALAWGKKLAEASDPVSAAAVLQGRATAEL TLRDQALSVWARKVVTQPNGTTTEDVARLRAAGFTDREIAEATFFIAFRLAFSVVNDALGAEPDWQLAAAAPPEVTAAVT FGRPTALKGT
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17997; Mature: 17997
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTRGWAWRPDVFDAFAALRSQLTDNSSLGKRELAVLVCATAAALGDSYCALAWGKKLA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EASDPVSAAAVLQGRATAELTLRDQALSVWARKVVTQPNGTTTEDVARLRAAGFTDREIA HCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHH EATFFIAFRLAFSVVNDALGAEPDWQLAAAAPPEVTAAVTFGRPTALKGT HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MNLTRGWAWRPDVFDAFAALRSQLTDNSSLGKRELAVLVCATAAALGDSYCALAWGKKLA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EASDPVSAAAVLQGRATAELTLRDQALSVWARKVVTQPNGTTTEDVARLRAAGFTDREIA HCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHH EATFFIAFRLAFSVVNDALGAEPDWQLAAAAPPEVTAAVTFGRPTALKGT HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA