| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788183
Identifier: 91788183
GI number: 91788183
Start: 2408077
End: 2408856
Strand: Reverse
Name: 91788183
Synonym: Bpro_2314
Alternate gene names: NA
Gene position: 2408856-2408077 (Counterclockwise)
Preceding gene: 91788184
Following gene: 91788182
Centisome position: 46.32
GC content: 62.82
Gene sequence:
>780_bases ATGATCGCGCAAGCAGTCTTACACGGCCAACAGCCCTTCAACCCTCCTCCCTATTTGACACGCCAAGCGCCGGGTGGCCG GGCTTTGGGGCTGCAGTTGCTGTCGCTTGGGTTGCTGGTAAGCGGCCTGATGGCCTTGACCCCCTTCTGTTTTGCCCAAA CAGCCCAGCCAGCAGCCCCCGCCAGCGCACTTGTAACCGGCAAGCCATCCGTGGCGCCGCCCCAAGTCAAGCCAGCCACC ATTTCTCGCCCTATTTGGACAGAGCTCACGCCCATGCAGCAGCATGCACTCAAGCCGCTGGCTTCAAGCTGGAACACCAT CAATGACGGGCAAAAGCGCAAATGGCTGGAAATCTCCAAAAATTACCCCTCGCTGCCTCCCGAAGGCCAAGCCACCATGC ACAGCCGCATGAATGAATGGGTCATGCTGAGCCCCCAGCAGCGGGCTCAAGCGCGGCTCAACTTTGGCAAAACCAGGGAG CTGTCCGGGCAATTGACGCCGGAGGAGAAAAAAGCCAAGTGGGAGACCTACCAGGCCCTGAGCGCTGAGGAAAAACAGAA GCTGGCCGCCAAGGCCAGTCCCAAGCCCACCGGTGCCGCCACGGCCGTCAAACCGGTGGCACGACAGAAACTCGCCGCCG TTCCGCCCCATCCCAACAAGCCAGTGACCAAGCCTGCGCCTAAAATCATGCCTCCACCACCGACGGCGGCCGGCAACCCG TTGGCACCGCGCCCGGTTGAAGCCGCCGACGGCCGGCCCGGTACCGCACCCCAGCGCTGA
Upstream 100 bases:
>100_bases CTCTGCTGACCGATGAACTACCACCCGACGCATTCGCCGATCCCGGGTTCGTCCAGTTTCTCAAGGCTACGCGCTAAGCC CCGACTTCCCCATTGCTAAA
Downstream 100 bases:
>100_bases CAACCAGCCAGTGCGCAGACTGGCCAAGGTTATTTAACAATCGATGCCACAGCCATTTTGAGGCAACTACTTTGCGCTAT AAAATTGATAGTATCCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MIAQAVLHGQQPFNPPPYLTRQAPGGRALGLQLLSLGLLVSGLMALTPFCFAQTAQPAAPASALVTGKPSVAPPQVKPAT ISRPIWTELTPMQQHALKPLASSWNTINDGQKRKWLEISKNYPSLPPEGQATMHSRMNEWVMLSPQQRAQARLNFGKTRE LSGQLTPEEKKAKWETYQALSAEEKQKLAAKASPKPTGAATAVKPVARQKLAAVPPHPNKPVTKPAPKIMPPPPTAAGNP LAPRPVEAADGRPGTAPQR
Sequences:
>Translated_259_residues MIAQAVLHGQQPFNPPPYLTRQAPGGRALGLQLLSLGLLVSGLMALTPFCFAQTAQPAAPASALVTGKPSVAPPQVKPAT ISRPIWTELTPMQQHALKPLASSWNTINDGQKRKWLEISKNYPSLPPEGQATMHSRMNEWVMLSPQQRAQARLNFGKTRE LSGQLTPEEKKAKWETYQALSAEEKQKLAAKASPKPTGAATAVKPVARQKLAAVPPHPNKPVTKPAPKIMPPPPTAAGNP LAPRPVEAADGRPGTAPQR >Mature_259_residues MIAQAVLHGQQPFNPPPYLTRQAPGGRALGLQLLSLGLLVSGLMALTPFCFAQTAQPAAPASALVTGKPSVAPPQVKPAT ISRPIWTELTPMQQHALKPLASSWNTINDGQKRKWLEISKNYPSLPPEGQATMHSRMNEWVMLSPQQRAQARLNFGKTRE LSGQLTPEEKKAKWETYQALSAEEKQKLAAKASPKPTGAATAVKPVARQKLAAVPPHPNKPVTKPAPKIMPPPPTAAGNP LAPRPVEAADGRPGTAPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27745; Mature: 27745
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAQAVLHGQQPFNPPPYLTRQAPGGRALGLQLLSLGLLVSGLMALTPFCFAQTAQPAAP CCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASALVTGKPSVAPPQVKPATISRPIWTELTPMQQHALKPLASSWNTINDGQKRKWLEISK CCEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC NYPSLPPEGQATMHSRMNEWVMLSPQQRAQARLNFGKTRELSGQLTPEEKKAKWETYQAL CCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH SAEEKQKLAAKASPKPTGAATAVKPVARQKLAAVPPHPNKPVTKPAPKIMPPPPTAAGNP HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC LAPRPVEAADGRPGTAPQR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIAQAVLHGQQPFNPPPYLTRQAPGGRALGLQLLSLGLLVSGLMALTPFCFAQTAQPAAP CCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ASALVTGKPSVAPPQVKPATISRPIWTELTPMQQHALKPLASSWNTINDGQKRKWLEISK CCEEEECCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC NYPSLPPEGQATMHSRMNEWVMLSPQQRAQARLNFGKTRELSGQLTPEEKKAKWETYQAL CCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH SAEEKQKLAAKASPKPTGAATAVKPVARQKLAAVPPHPNKPVTKPAPKIMPPPPTAAGNP HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC LAPRPVEAADGRPGTAPQR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA