| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788182
Identifier: 91788182
GI number: 91788182
Start: 2407408
End: 2407932
Strand: Reverse
Name: 91788182
Synonym: Bpro_2313
Alternate gene names: NA
Gene position: 2407932-2407408 (Counterclockwise)
Preceding gene: 91788183
Following gene: 91788181
Centisome position: 46.3
GC content: 60.38
Gene sequence:
>525_bases ATGGCCTGCTGGCTATATGAAGGCCTGCTGATGTTCGGGGTGGTCTTCATTGCCGGCTATCTGTTCGGCACGCTGAGCCA GACGCGCAATGCGCTGGACAATCGCCATGCCTTGCAGGCCTTTGTTTTTGTCATTTTCGGCATTTACTTCGTCTGGTTTT GGGCCAAAGGCCAGACGCTTGCCATGAAGACCTGGAATATCCGTGTGGTCGATGTGAACGGCGCTCCCATCACCCAGCGA CGCGCCCTGCTGCGCTATCTGCTGAGCTGGCTGTGGTTCCTGCCGCCGCTCGGCGCGAGTTGGCTGCTGGGCCTCTCGGG TGCGGAAGGGGGCGTATTGACGCTGGGCTGGGTTGCCATCTGGGCGATTTTGGCGCGCTTTCATCCGGAGCGGCAATTCT GGCACGACGCCTGGGCCGGCACGAGGCTGGTGACCTGGGTGGCGCCCGAAAAACAAAAACGTGAAGAGAAGCACGAAGGC AAGCGCAAGCCAAAAGACCGGCCTGTAGCTTCCGACCCGTCCTAA
Upstream 100 bases:
>100_bases TGCCACAGCCATTTTGAGGCAACTACTTTGCGCTATAAAATTGATAGTATCCAACACTCCGGCTAACACGCCGACGCCTA TACCATCACTTCCCAGACGC
Downstream 100 bases:
>100_bases CATCAACATGCCACAAAGCTGCGACACAATGCACCCATGTCCCAACCAGTCCAGTTTTCAGCTTCCGCAGCGACCAGCTC CAGCCCTCACGTGACCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: RDD Domain Containing Protein; RDD Family Protein; Transmembrane Protein; RDD Family; RDD Domain Protein
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MACWLYEGLLMFGVVFIAGYLFGTLSQTRNALDNRHALQAFVFVIFGIYFVWFWAKGQTLAMKTWNIRVVDVNGAPITQR RALLRYLLSWLWFLPPLGASWLLGLSGAEGGVLTLGWVAIWAILARFHPERQFWHDAWAGTRLVTWVAPEKQKREEKHEG KRKPKDRPVASDPS
Sequences:
>Translated_174_residues MACWLYEGLLMFGVVFIAGYLFGTLSQTRNALDNRHALQAFVFVIFGIYFVWFWAKGQTLAMKTWNIRVVDVNGAPITQR RALLRYLLSWLWFLPPLGASWLLGLSGAEGGVLTLGWVAIWAILARFHPERQFWHDAWAGTRLVTWVAPEKQKREEKHEG KRKPKDRPVASDPS >Mature_173_residues ACWLYEGLLMFGVVFIAGYLFGTLSQTRNALDNRHALQAFVFVIFGIYFVWFWAKGQTLAMKTWNIRVVDVNGAPITQRR ALLRYLLSWLWFLPPLGASWLLGLSGAEGGVLTLGWVAIWAILARFHPERQFWHDAWAGTRLVTWVAPEKQKREEKHEGK RKPKDRPVASDPS
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19988; Mature: 19856
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACWLYEGLLMFGVVFIAGYLFGTLSQTRNALDNRHALQAFVFVIFGIYFVWFWAKGQTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE AMKTWNIRVVDVNGAPITQRRALLRYLLSWLWFLPPLGASWLLGLSGAEGGVLTLGWVAI EEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCEEHHHHHHH WAILARFHPERQFWHDAWAGTRLVTWVAPEKQKREEKHEGKRKPKDRPVASDPS HHHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ACWLYEGLLMFGVVFIAGYLFGTLSQTRNALDNRHALQAFVFVIFGIYFVWFWAKGQTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE AMKTWNIRVVDVNGAPITQRRALLRYLLSWLWFLPPLGASWLLGLSGAEGGVLTLGWVAI EEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCEEHHHHHHH WAILARFHPERQFWHDAWAGTRLVTWVAPEKQKREEKHEGKRKPKDRPVASDPS HHHHHHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA