| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788180
Identifier: 91788180
GI number: 91788180
Start: 2406326
End: 2406928
Strand: Reverse
Name: 91788180
Synonym: Bpro_2311
Alternate gene names: NA
Gene position: 2406928-2406326 (Counterclockwise)
Preceding gene: 91788181
Following gene: 91788177
Centisome position: 46.28
GC content: 62.02
Gene sequence:
>603_bases ATGAATTCCAGCACCCTGAAACCCGCTTTTTCCGTCTGCGTTTACTGCGGCTCCCGGCCCGGAAATACCCCTGAATTTGC CGTGGTGGCACGTGAAGTCGGCAGCTGGATAGGCAGGCACGGCGGCCAACTGGTCTATGGTGGTGGCCGCAATGGGCTGA TGGGCATCATGGCAGACGCTGCACTGGCCGCGGGCGGGCGCGTGCTGGGCGTGATTCCCAAGGCGCTGGTGGAAAAGGAA TGGGCCCACAGCGGTTGCACGGAGCTGCACATAGTGGACACCATGCATGAGCGCAAGCGCATCATGGCCGAGCATGCCGA TGCATTTTTGGCGTTGCCGGGGGGCATCGGCACGCTGGAGGAGTTTTTCGAGGTCTGGACCTGGCGCCAGCTCGGCTACC ACGACAAACCCGTGGGCCTGCTCAACATGGCAGGCCATTACAACAGCCTGCTGGCGTTTCTGGACTCTGCCGTCAAAAGC GGCTTCATGAGTGACTGGCAGATGGAACTGATCTGCACCGGCAGCGACGCGCAGGCGCTGCTCCGGCAACTGGTGCAAGC GGCGGGTATGACGGCCACCACCGCACGGCTAGACCAGATTTAA
Upstream 100 bases:
>100_bases TTTCCAAGCGCGCCAAGGACATGGGCAGCGCGGCCGTGCTGCTCAGCCTGCTGCTTTGCGCGGGCACCTGGGCGCTGGCC CTGCTTCAGCGATTTGCAGC
Downstream 100 bases:
>100_bases AGCTGCCGGGCAAAACGCCGCAGTCACCGAACGCAGCGAGCAGCGAAGAGCCGCCTCGAGCAAGTCTTACCCCTCGAGGG GCAGCGAAGCACACAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADAALAAGGRVLGVIPKALVEKE WAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLEEFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKS GFMSDWQMELICTGSDAQALLRQLVQAAGMTATTARLDQI
Sequences:
>Translated_200_residues MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADAALAAGGRVLGVIPKALVEKE WAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLEEFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKS GFMSDWQMELICTGSDAQALLRQLVQAAGMTATTARLDQI >Mature_200_residues MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADAALAAGGRVLGVIPKALVEKE WAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLEEFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKS GFMSDWQMELICTGSDAQALLRQLVQAAGMTATTARLDQI
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=200, Percent_Identity=40.5, Blast_Score=138, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 21550; Mature: 21550
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADA CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH ALAAGGRVLGVIPKALVEKEWAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLE HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEEECCCCCCHHH EFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKSGFMSDWQMELICTGSDAQAL HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH LRQLVQAAGMTATTARLDQI HHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADA CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH ALAAGGRVLGVIPKALVEKEWAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLE HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEEECCCCCCHHH EFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKSGFMSDWQMELICTGSDAQAL HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH LRQLVQAAGMTATTARLDQI HHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]