Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788180

Identifier: 91788180

GI number: 91788180

Start: 2406326

End: 2406928

Strand: Reverse

Name: 91788180

Synonym: Bpro_2311

Alternate gene names: NA

Gene position: 2406928-2406326 (Counterclockwise)

Preceding gene: 91788181

Following gene: 91788177

Centisome position: 46.28

GC content: 62.02

Gene sequence:

>603_bases
ATGAATTCCAGCACCCTGAAACCCGCTTTTTCCGTCTGCGTTTACTGCGGCTCCCGGCCCGGAAATACCCCTGAATTTGC
CGTGGTGGCACGTGAAGTCGGCAGCTGGATAGGCAGGCACGGCGGCCAACTGGTCTATGGTGGTGGCCGCAATGGGCTGA
TGGGCATCATGGCAGACGCTGCACTGGCCGCGGGCGGGCGCGTGCTGGGCGTGATTCCCAAGGCGCTGGTGGAAAAGGAA
TGGGCCCACAGCGGTTGCACGGAGCTGCACATAGTGGACACCATGCATGAGCGCAAGCGCATCATGGCCGAGCATGCCGA
TGCATTTTTGGCGTTGCCGGGGGGCATCGGCACGCTGGAGGAGTTTTTCGAGGTCTGGACCTGGCGCCAGCTCGGCTACC
ACGACAAACCCGTGGGCCTGCTCAACATGGCAGGCCATTACAACAGCCTGCTGGCGTTTCTGGACTCTGCCGTCAAAAGC
GGCTTCATGAGTGACTGGCAGATGGAACTGATCTGCACCGGCAGCGACGCGCAGGCGCTGCTCCGGCAACTGGTGCAAGC
GGCGGGTATGACGGCCACCACCGCACGGCTAGACCAGATTTAA

Upstream 100 bases:

>100_bases
TTTCCAAGCGCGCCAAGGACATGGGCAGCGCGGCCGTGCTGCTCAGCCTGCTGCTTTGCGCGGGCACCTGGGCGCTGGCC
CTGCTTCAGCGATTTGCAGC

Downstream 100 bases:

>100_bases
AGCTGCCGGGCAAAACGCCGCAGTCACCGAACGCAGCGAGCAGCGAAGAGCCGCCTCGAGCAAGTCTTACCCCTCGAGGG
GCAGCGAAGCACACAAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADAALAAGGRVLGVIPKALVEKE
WAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLEEFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKS
GFMSDWQMELICTGSDAQALLRQLVQAAGMTATTARLDQI

Sequences:

>Translated_200_residues
MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADAALAAGGRVLGVIPKALVEKE
WAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLEEFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKS
GFMSDWQMELICTGSDAQALLRQLVQAAGMTATTARLDQI
>Mature_200_residues
MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADAALAAGGRVLGVIPKALVEKE
WAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLEEFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKS
GFMSDWQMELICTGSDAQALLRQLVQAAGMTATTARLDQI

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=200, Percent_Identity=40.5, Blast_Score=138, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21550; Mature: 21550

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADA
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
ALAAGGRVLGVIPKALVEKEWAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLE
HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEEECCCCCCHHH
EFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKSGFMSDWQMELICTGSDAQAL
HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH
LRQLVQAAGMTATTARLDQI
HHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MNSSTLKPAFSVCVYCGSRPGNTPEFAVVAREVGSWIGRHGGQLVYGGGRNGLMGIMADA
CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
ALAAGGRVLGVIPKALVEKEWAHSGCTELHIVDTMHERKRIMAEHADAFLALPGGIGTLE
HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCEEEECCCCCCHHH
EFFEVWTWRQLGYHDKPVGLLNMAGHYNSLLAFLDSAVKSGFMSDWQMELICTGSDAQAL
HHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHH
LRQLVQAAGMTATTARLDQI
HHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]