| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788177
Identifier: 91788177
GI number: 91788177
Start: 2402624
End: 2403979
Strand: Reverse
Name: 91788177
Synonym: Bpro_2308
Alternate gene names: NA
Gene position: 2403979-2402624 (Counterclockwise)
Preceding gene: 91788180
Following gene: 91788176
Centisome position: 46.23
GC content: 60.1
Gene sequence:
>1356_bases GTGCCTGAAAACAATTATGTCATCCGCGTGCTGGATTCACCGCTGGAGATCGACGGTAGCGAGTGGAATTCCCTGCTGAT GACGCAAAGTCCGGACGGTGGCATCAACCCCTTCATGCGCCATGAATATCTGGTGGCCATGCATGAGAGCGGCTGCGCCA CACCCGAGACCGGCTGGACGCCCCGCATCGTCACGCTCTGGCAAGGCAAGCGGCTGGCAGGCGCCTGCGCGCTCTACCTC AAAACCCACTCCTACGGCGAGTACGTGTTTGACTGGGCCTGGGCCAACGCCTACCAACAACACGGCCTGGCCTATTACCC GAAAGCCGTGGTGGCCCCGCCTTTCACCCCCGTGCCGGGCGCGCGGCTGCTGGCGCGCGATGCAGCGGCGCGCCAGTTGC TGGTCCAGGCGCTGATAGCCTGGTGCAAACAGGAAAAGCTCTCTTCGCTGCACCTGCTATTTGCTGCGGACGAGGACGTA ATCGCTTGCGAAGAAGCTGGTTTGATGCTGCGCCACAGCGTGCAGTTTCACTGGCAGAACAAAAGCAAAAGCGCGCCCGC CCCCGCTGAAACCGGTTCCGTTCGGGCTGAACCTGCCCAGACCATTCCAGCCCCGGTGAATTTTTCGACCTCTTCGACCG CGCAGAGCGGCGCCGCAAGCACCAGAGATACATCTTGCCAAACGGAAGGCAGGTACGGCTACCGCGACTTCGATGACTTC CTGATGACCCTCAGCCAGGAAAAGCGCAAAAAAATCCGTCAGGAACGTCGCAAGGTGACTGAAGCTGGCGTGACCTTCCG CTGGTCGCTGGGCAAGAACATCGGCAAAGAGGACTGGGATTTCTTTTACCAGTGCTACGAACGCACCTATTACGAGCACG GCAATGCGCCGTATCTCAGTCGCTTCTTCTTCGCGCGCATGGCCGACACCATGGCCGAAAATTGGCTGCTATTTGTGGCG GAGCGCCGGGGCCGGAAAATAGCTACAAGTTTGATAGCTGTTGATCCAGGATCTACCGGGGCCACAGGTCAATCTGACGT AGAAAGATCACCCAAAATAGCCTACGGCCGGTACTGGGGCGCGATGGAACGCGTCGACTGCCTGCACTTTGAAGCCTGCT ACTACCAGCCGCTGGCCTGGTGCATAGAACATGGCTACCAGCGCTTTGAGGGCGGCGCGCAAGGCGAGCACAAAATGGCC AGAGCCCTGCTGCCCGTCAAAACCACCAGCGCCCACTGGCTGGCACACCCCTCGTTTGCCGACGCCGTGGAGCGCTTCCT CGCCCGCGAAGGCGAAGGTATTGAGAACTACATGGAGGAACTGGAAAGGCGCAGCCCGTTCAGGCAGGCCTCGTAA
Upstream 100 bases:
>100_bases CGGGCTGAGTCTGTCGAAGCCTTGGTCAATCAATGCACACAACCCCTGGCCCCTGCGACAAACTCAGGGTCGGCTGAACC ATGGGTGTACGGAGGATTGC
Downstream 100 bases:
>100_bases CGGCTGATTACCGTCATTCACTGCGCCCCGGCCTCACTTCCCGAACTCACCATGAACGGCCAGGCGTGGGCGGATTTTCC GGACGGTACGGGCTGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MPENNYVIRVLDSPLEIDGSEWNSLLMTQSPDGGINPFMRHEYLVAMHESGCATPETGWTPRIVTLWQGKRLAGACALYL KTHSYGEYVFDWAWANAYQQHGLAYYPKAVVAPPFTPVPGARLLARDAAARQLLVQALIAWCKQEKLSSLHLLFAADEDV IACEEAGLMLRHSVQFHWQNKSKSAPAPAETGSVRAEPAQTIPAPVNFSTSSTAQSGAASTRDTSCQTEGRYGYRDFDDF LMTLSQEKRKKIRQERRKVTEAGVTFRWSLGKNIGKEDWDFFYQCYERTYYEHGNAPYLSRFFFARMADTMAENWLLFVA ERRGRKIATSLIAVDPGSTGATGQSDVERSPKIAYGRYWGAMERVDCLHFEACYYQPLAWCIEHGYQRFEGGAQGEHKMA RALLPVKTTSAHWLAHPSFADAVERFLAREGEGIENYMEELERRSPFRQAS
Sequences:
>Translated_451_residues MPENNYVIRVLDSPLEIDGSEWNSLLMTQSPDGGINPFMRHEYLVAMHESGCATPETGWTPRIVTLWQGKRLAGACALYL KTHSYGEYVFDWAWANAYQQHGLAYYPKAVVAPPFTPVPGARLLARDAAARQLLVQALIAWCKQEKLSSLHLLFAADEDV IACEEAGLMLRHSVQFHWQNKSKSAPAPAETGSVRAEPAQTIPAPVNFSTSSTAQSGAASTRDTSCQTEGRYGYRDFDDF LMTLSQEKRKKIRQERRKVTEAGVTFRWSLGKNIGKEDWDFFYQCYERTYYEHGNAPYLSRFFFARMADTMAENWLLFVA ERRGRKIATSLIAVDPGSTGATGQSDVERSPKIAYGRYWGAMERVDCLHFEACYYQPLAWCIEHGYQRFEGGAQGEHKMA RALLPVKTTSAHWLAHPSFADAVERFLAREGEGIENYMEELERRSPFRQAS >Mature_450_residues PENNYVIRVLDSPLEIDGSEWNSLLMTQSPDGGINPFMRHEYLVAMHESGCATPETGWTPRIVTLWQGKRLAGACALYLK THSYGEYVFDWAWANAYQQHGLAYYPKAVVAPPFTPVPGARLLARDAAARQLLVQALIAWCKQEKLSSLHLLFAADEDVI ACEEAGLMLRHSVQFHWQNKSKSAPAPAETGSVRAEPAQTIPAPVNFSTSSTAQSGAASTRDTSCQTEGRYGYRDFDDFL MTLSQEKRKKIRQERRKVTEAGVTFRWSLGKNIGKEDWDFFYQCYERTYYEHGNAPYLSRFFFARMADTMAENWLLFVAE RRGRKIATSLIAVDPGSTGATGQSDVERSPKIAYGRYWGAMERVDCLHFEACYYQPLAWCIEHGYQRFEGGAQGEHKMAR ALLPVKTTSAHWLAHPSFADAVERFLAREGEGIENYMEELERRSPFRQAS
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51053; Mature: 50922
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENNYVIRVLDSPLEIDGSEWNSLLMTQSPDGGINPFMRHEYLVAMHESGCATPETGWT CCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHEEEEEECCCCCCCCCCCC PRIVTLWQGKRLAGACALYLKTHSYGEYVFDWAWANAYQQHGLAYYPKAVVAPPFTPVPG CEEEEEECCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC ARLLARDAAARQLLVQALIAWCKQEKLSSLHLLFAADEDVIACEEAGLMLRHSVQFHWQN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHCCEEEEEEEEEEECC KSKSAPAPAETGSVRAEPAQTIPAPVNFSTSSTAQSGAASTRDTSCQTEGRYGYRDFDDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LMTLSQEKRKKIRQERRKVTEAGVTFRWSLGKNIGKEDWDFFYQCYERTYYEHGNAPYLS HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH RFFFARMADTMAENWLLFVAERRGRKIATSLIAVDPGSTGATGQSDVERSPKIAYGRYWG HHHHHHHHHHHHHCEEEEEEHHCCCEEEEEEEEECCCCCCCCCCHHHCCCCCEEHHHHHC AMERVDCLHFEACYYQPLAWCIEHGYQRFEGGAQGEHKMARALLPVKTTSAHWLAHPSFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEECCCHH DAVERFLAREGEGIENYMEELERRSPFRQAS HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PENNYVIRVLDSPLEIDGSEWNSLLMTQSPDGGINPFMRHEYLVAMHESGCATPETGWT CCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHEEEEEECCCCCCCCCCCC PRIVTLWQGKRLAGACALYLKTHSYGEYVFDWAWANAYQQHGLAYYPKAVVAPPFTPVPG CEEEEEECCCCHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC ARLLARDAAARQLLVQALIAWCKQEKLSSLHLLFAADEDVIACEEAGLMLRHSVQFHWQN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEHHHCCEEEEEEEEEEECC KSKSAPAPAETGSVRAEPAQTIPAPVNFSTSSTAQSGAASTRDTSCQTEGRYGYRDFDDF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LMTLSQEKRKKIRQERRKVTEAGVTFRWSLGKNIGKEDWDFFYQCYERTYYEHGNAPYLS HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH RFFFARMADTMAENWLLFVAERRGRKIATSLIAVDPGSTGATGQSDVERSPKIAYGRYWG HHHHHHHHHHHHHCEEEEEEHHCCCEEEEEEEEECCCCCCCCCCHHHCCCCCEEHHHHHC AMERVDCLHFEACYYQPLAWCIEHGYQRFEGGAQGEHKMARALLPVKTTSAHWLAHPSFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEECCCHH DAVERFLAREGEGIENYMEELERRSPFRQAS HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA