| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788107
Identifier: 91788107
GI number: 91788107
Start: 2323470
End: 2323880
Strand: Direct
Name: 91788107
Synonym: Bpro_2235
Alternate gene names: NA
Gene position: 2323470-2323880 (Clockwise)
Preceding gene: 91788106
Following gene: 91788108
Centisome position: 44.68
GC content: 61.07
Gene sequence:
>411_bases ATGAACACCGAAGTCTGGCTGCAGCTAGTCCAACAGGGCGGCATGACGGCGGTCATCGCTGCGTTTCTGACCGGTCTGGT CTCGAGCTTCAACCCCGTGGCGATGGCAGCCGTGCCAGTGGCGCTTGCGTATGTGACCAAGGCCCGGGAAACCCGACAGG CGGTGCTGTATGGCGCCATGTTTGTGGCCGGCATGCTTGTCACGCACACGGCACCTGGATTTTTGGCGGGCCTGGGCGGC AGCTGGGTCCAGGGCTTGCTGGGGCGGTTTTGGGGTCTTTTATTGGGCCCGATCCTGATCCTGCTTGGTCTGGTCTGGAC CGGCTGGGTCCGGATTCCCTTGCCTGTCTTTGCCCTGCGAGACTCCCCCGCTAACAAAGCCATTTCCCTTCTTAAATCGC TGATGCTTTGA
Upstream 100 bases:
>100_bases CGTTCCGGCCGTTGCGATTGACGGGGCACTCGCGTTTGCCAAGCTGCCAACAGCGCAGCAGCTTGTCTCTGAGCTGGCGG CACGCGTGGAAAGCAACTGA
Downstream 100 bases:
>100_bases CTTGTTTCTGGGGCAACCGTATCCATCTTCACGAAAAATGCGATGACCGCATGTCGAGAGACATTGAGATTTAATGATTA ACTTATTTGCCAATCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MNTEVWLQLVQQGGMTAVIAAFLTGLVSSFNPVAMAAVPVALAYVTKARETRQAVLYGAMFVAGMLVTHTAPGFLAGLGG SWVQGLLGRFWGLLLGPILILLGLVWTGWVRIPLPVFALRDSPANKAISLLKSLML
Sequences:
>Translated_136_residues MNTEVWLQLVQQGGMTAVIAAFLTGLVSSFNPVAMAAVPVALAYVTKARETRQAVLYGAMFVAGMLVTHTAPGFLAGLGG SWVQGLLGRFWGLLLGPILILLGLVWTGWVRIPLPVFALRDSPANKAISLLKSLML >Mature_136_residues MNTEVWLQLVQQGGMTAVIAAFLTGLVSSFNPVAMAAVPVALAYVTKARETRQAVLYGAMFVAGMLVTHTAPGFLAGLGG SWVQGLLGRFWGLLLGPILILLGLVWTGWVRIPLPVFALRDSPANKAISLLKSLML
Specific function: Unknown
COG id: COG0785
COG function: function code O; Cytochrome c biogenesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14449; Mature: 14449
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTEVWLQLVQQGGMTAVIAAFLTGLVSSFNPVAMAAVPVALAYVTKARETRQAVLYGAM CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVAGMLVTHTAPGFLAGLGGSWVQGLLGRFWGLLLGPILILLGLVWTGWVRIPLPVFALR HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHC DSPANKAISLLKSLML CCCHHHHHHHHHHHHC >Mature Secondary Structure MNTEVWLQLVQQGGMTAVIAAFLTGLVSSFNPVAMAAVPVALAYVTKARETRQAVLYGAM CCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVAGMLVTHTAPGFLAGLGGSWVQGLLGRFWGLLLGPILILLGLVWTGWVRIPLPVFALR HHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHC DSPANKAISLLKSLML CCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA