Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788045

Identifier: 91788045

GI number: 91788045

Start: 2265430

End: 2267067

Strand: Reverse

Name: 91788045

Synonym: Bpro_2172

Alternate gene names: NA

Gene position: 2267067-2265430 (Counterclockwise)

Preceding gene: 91788046

Following gene: 91788044

Centisome position: 43.6

GC content: 60.87

Gene sequence:

>1638_bases
ATGCGACAACTGGCGGGTGCCTGTGTGCTGTGTTTCCTGCTGGCTGCCTGCGGCGGCGGCGGCGGCGGGTCCTCCGGCAC
CGGCGGCCCGACGGTGGTCAGCGGCAAGGTCACCTTCGATTTTGTGCCCGTCGCACTCACCGGCGCGCTGCCGCGGCTCG
ACTATGACAACACGGCCCGCCGGCCTGCGCGTTCTGTCGTGGTTGAAGCGGTCGACACAGCCGCCCAGTCAGTCCTGGCC
ACAGTCAGTACCAATGCCGCAGGCGATTACACCCTGACCCTGCCAGCGGGACGAACGGCATTTATCCGTGCCAAAGCCGC
GATGAAGGCGATCGGCAGCAACGCGGCCGACATATCGGTGATCGACAACACCAGTGCCGGTGCGCAATGGGCCATTGACG
GTGCCCCCTTTGTCACCGGCGTCACCCCCGCCTTGACCCAAAACCTCAACGCAGCTTCAGGCTGGAATGGCAGCACCTAC
ATCGACGCCGAACGTGCCGCCGGGCCGTTCGCGATTCTGGATACGATTTACCAGGCCGCCCAGAAAATCATCTCGGTAGA
TCCGGCCGTCAGCTTTCCCAAATTGAATGCGAACTGGAGTCCCAACAATATTGCGTCAGGTGGCGATATTGATATTGCAT
TGGGGCAAATAGGAACGTCTTTTTACCAGCGTACAACAAGCGGTGGCACGGTGATCCGCAACCTCTATTTCCTGGGATTT
GCCGACAACGACACCGACGAATACGACAGGCATGTGGTGGCGCATGAACTCGGGCACTACCTGCAGGAAGCCTTCGCGCG
CGACGACTCGGTGGGTGGCCTGCATGGCGGCCCGGACGACCTGCTTGACCTGCGGGTGGCATTTTCGGAAGGCTGGAGCA
ATGGCTGGTCGGGCATTGCGCTCAACAACCCGATTTACTCAGACACCATCGGGCCGAGCCAGGCCAGCGGCGGCAGCTTC
AATGTGTCCGTCGGCGAAAGCACCAACCCGGGCTGGTTCAGGGAACACAGCGTGGAGAAAATATTCTGGGATTTCAGCAA
CCACGCGTCGATTGGCTTCAGCCAGGTCTGGAGCACCCTGAAGACGGGCCTGACGGTTTCAGCGGCCCTCTCCAGCATCC
ACTCATTTGCCCGGGCGCTTGCCAACGACACATCCAACAACGCCCTCGTCGCCAGCATTCTGGCCACGCAGAGCATCGCT
CTACCCGCTACGCCCTATGCCGACAATGAGACCAATTTCGGCAATCCGGCGATTGCCAACATCAATCCGATCTACCTGAC
CTATGGCTCGCTCAATACCGCCCTCACCAATGTGTGTGTGGACAATGCGGTCGATCCCTACCTTGACGCCAACAAGGCCG
GTGAATATCGCCACGTCCGACTGACGCTGCCGGCCGGCAACCGCACCTTCACGGTCACGCAAAGCAGCAGCACCACCAAT
GTGAGCGATCCTGATTTCGTCCTGCACAACAACGCGGGCCGACTGTTTGAGGCCAATGGGATCGTGTCAAATTCAGAAAC
GGCGAGCTGGAGTCTGCCGGCCGGTGACTACGTACTGGCCATCACCGATTTCCGGCTTTTCCGGCCGACGTCCAGCGGCG
GCAATACCAGCGCCTGCTTCAGCCTGACGGTCCAGTGA

Upstream 100 bases:

>100_bases
TTAAACAGTGGATGGCATGAGGCCCCGGCATGACGGGTCGCGCCATGACGGCGAAGCTTGTCGTGGCGCCTGTGAATACT
TCGTTCGAGGACGAGAAAAA

Downstream 100 bases:

>100_bases
CCATGACGCCGTGGACCAGGAGTTCACCATGAAATTCGCCATGAAAAATAGCCAGTTGCTTTCCCCCTTCATACCGCTCT
GTGTACTGGCTTGCATGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTARRPARSVVVEAVDTAAQSVLA
TVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISVIDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTY
IDAERAAGPFAILDTIYQAAQKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF
ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIALNNPIYSDTIGPSQASGGSF
NVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTLKTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIA
LPATPYADNETNFGNPAIANINPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN
VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACFSLTVQ

Sequences:

>Translated_545_residues
MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTARRPARSVVVEAVDTAAQSVLA
TVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISVIDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTY
IDAERAAGPFAILDTIYQAAQKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF
ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIALNNPIYSDTIGPSQASGGSF
NVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTLKTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIA
LPATPYADNETNFGNPAIANINPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN
VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACFSLTVQ
>Mature_545_residues
MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTARRPARSVVVEAVDTAAQSVLA
TVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISVIDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTY
IDAERAAGPFAILDTIYQAAQKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF
ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIALNNPIYSDTIGPSQASGGSF
NVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTLKTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIA
LPATPYADNETNFGNPAIANINPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN
VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACFSLTVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56968; Mature: 56968

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTAR
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEEEEEEEHHHCCCCCCCCCCCCC
RPARSVVVEAVDTAAQSVLATVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCEEEE
IDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTYIDAERAAGPFAILDTIYQAA
EECCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHH
QKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEE
ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCEE
LNNPIYSDTIGPSQASGGSFNVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTL
ECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCHHEEEECCCCCCCCHHHHHHHH
KTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIALPATPYADNETNFGNPAIAN
HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCEECCCCCCCCCCCCCCCCEEEC
INPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN
CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCC
VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACF
CCCCCEEEECCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCEEEE
SLTVQ
EEEEC
>Mature Secondary Structure
MRQLAGACVLCFLLAACGGGGGGSSGTGGPTVVSGKVTFDFVPVALTGALPRLDYDNTAR
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEEEEEEEHHHCCCCCCCCCCCCC
RPARSVVVEAVDTAAQSVLATVSTNAAGDYTLTLPAGRTAFIRAKAAMKAIGSNAADISV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCEEEE
IDNTSAGAQWAIDGAPFVTGVTPALTQNLNAASGWNGSTYIDAERAAGPFAILDTIYQAA
EECCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHH
QKIISVDPAVSFPKLNANWSPNNIASGGDIDIALGQIGTSFYQRTTSGGTVIRNLYFLGF
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEEEEEEEE
ADNDTDEYDRHVVAHELGHYLQEAFARDDSVGGLHGGPDDLLDLRVAFSEGWSNGWSGIA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCEE
LNNPIYSDTIGPSQASGGSFNVSVGESTNPGWFREHSVEKIFWDFSNHASIGFSQVWSTL
ECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCHHEEEECCCCCCCCHHHHHHHH
KTGLTVSAALSSIHSFARALANDTSNNALVASILATQSIALPATPYADNETNFGNPAIAN
HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCEECCCCCCCCCCCCCCCCEEEC
INPIYLTYGSLNTALTNVCVDNAVDPYLDANKAGEYRHVRLTLPAGNRTFTVTQSSSTTN
CCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCC
VSDPDFVLHNNAGRLFEANGIVSNSETASWSLPAGDYVLAITDFRLFRPTSSGGNTSACF
CCCCCEEEECCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCCCEEEE
SLTVQ
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA