| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yeaH [C]
Identifier: 91788031
GI number: 91788031
Start: 2250051
End: 2251322
Strand: Direct
Name: yeaH [C]
Synonym: Bpro_2158
Alternate gene names: 91788031
Gene position: 2250051-2251322 (Clockwise)
Preceding gene: 91788030
Following gene: 91788032
Centisome position: 43.27
GC content: 61.24
Gene sequence:
>1272_bases GTGCTCCAGCAAGTTATCGATCGGCGGTTGTCGGGGAAGAACAAGTCTATCGGCAACCGCGAGCGCTTCCTGCGCCGCTT CCGCGGGCAGATCCGGGAAGCCGTTCGCCGCGCCGTGGCGGGCCGCAGCATTCACGACATCGAGCAGGGCGAGGACATCA CACTGCCACGGCGCGACGTGTCCGAGCCTGTGTTTGGGCACGGATCCGGCGGCATTCGCGAGACTGTCCACCCCGGTAAC CGCGACTATGTGCGCGGCGACCGGATCGATCGGCCATCGGGCGGTGGCGCTGGTGGGTCGGGTCCGGGTGCCAGCCAGGA CGCCATCGGCGAAGACGATTTCGTGTTCCGCATCACGCGCGAAGAGTTCATGCAGTACTTTTTTGATGATCTCGCGTTGC CTCATCTGGTGCGGACCCAACTCCTGCCCGATGCGCCGGAGTGGAAGTCCCGGCGTGCCGGTTTTATTTCTGAGGGAACG CCGACCAACCTGCATGTGGTGCGTTCGATGCGGGTGGCCCTGAGCCGGCGTATCGCCCTGGGTGGGGATACCCGGCGGCG GCTGCATGAACTGGAACTGCAACTGGCCGAAGCCATGCGCCAGACGCCGCCAATGCCTGGGGAGATTCATGCGCTGACAG TGCAAATTGAAATGCTACGCCGCCGGCTTGGGAAGATTCCGTTTTTTGATCCGTTTGACCTGCGTTACCGCAACCGGGTC AGGGTGCCCCTGCCCACCGCCAAGGCGGCGATGTTCTGCCTGATGGATGTCTCGGGCTCGATGGATGAGGCGCGCAAGGA TATCGCCAAGCGTTTTTTCATTTTGCTGTACCTCTTCCTGAGACGCCATTACGAGAGAACCGACGTTATCTTCATTCGCC ACCATACGCAGGCCACCGAGGTCTCCGAAGAGGAGTTCTTCCAGTCCACTGAAACCGGTGGCACGGTGGTGTCCAGCGCC TTGACGCTGATGCACCAGATCATCCAGGCCCGCTACCCGCCGGGCGAATGGAACATCTACGGAGCCCAGGCTTCAGACGG CGACAACTGGCATCAGGACTCGGCCAAGTGCCGTGAACTGCTGACTGGCAAGCTGCTGCCGGTATCACGGTACTTCGCTT ATGTGCAGGTGGGCGAGGAAGACCAGAACCTGTGGGAAGAGTACACCCAGGTGCAAGACAGCAGCCCCAATTTCGCCATG CGCAAGATCAGCGATGCCGCGGAGATTTATCCGGTGTTCAGGGAGCTGTTCAAGAAAGGCGTCAGTACATGA
Upstream 100 bases:
>100_bases TGTTGTGTGACTGGTACCTGCGCGTTCGCAAGAGCTCCTGAAGTTCGCGGCCTGTGCCTGTAGTACGGGCGCGCCATTTA GCATCAGACCGGAGATCACT
Downstream 100 bases:
>100_bases GCCGGACAAAGCCGCGCCTGCGCTCCGGGACGTCGCAGGCGGAACTGCCGGCAAGCGAGCGTCGGCCTGCGCGCCTGCCC AGTCCGCCGGACTGGTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MLQQVIDRRLSGKNKSIGNRERFLRRFRGQIREAVRRAVAGRSIHDIEQGEDITLPRRDVSEPVFGHGSGGIRETVHPGN RDYVRGDRIDRPSGGGAGGSGPGASQDAIGEDDFVFRITREEFMQYFFDDLALPHLVRTQLLPDAPEWKSRRAGFISEGT PTNLHVVRSMRVALSRRIALGGDTRRRLHELELQLAEAMRQTPPMPGEIHALTVQIEMLRRRLGKIPFFDPFDLRYRNRV RVPLPTAKAAMFCLMDVSGSMDEARKDIAKRFFILLYLFLRRHYERTDVIFIRHHTQATEVSEEEFFQSTETGGTVVSSA LTLMHQIIQARYPPGEWNIYGAQASDGDNWHQDSAKCRELLTGKLLPVSRYFAYVQVGEEDQNLWEEYTQVQDSSPNFAM RKISDAAEIYPVFRELFKKGVST
Sequences:
>Translated_423_residues MLQQVIDRRLSGKNKSIGNRERFLRRFRGQIREAVRRAVAGRSIHDIEQGEDITLPRRDVSEPVFGHGSGGIRETVHPGN RDYVRGDRIDRPSGGGAGGSGPGASQDAIGEDDFVFRITREEFMQYFFDDLALPHLVRTQLLPDAPEWKSRRAGFISEGT PTNLHVVRSMRVALSRRIALGGDTRRRLHELELQLAEAMRQTPPMPGEIHALTVQIEMLRRRLGKIPFFDPFDLRYRNRV RVPLPTAKAAMFCLMDVSGSMDEARKDIAKRFFILLYLFLRRHYERTDVIFIRHHTQATEVSEEEFFQSTETGGTVVSSA LTLMHQIIQARYPPGEWNIYGAQASDGDNWHQDSAKCRELLTGKLLPVSRYFAYVQVGEEDQNLWEEYTQVQDSSPNFAM RKISDAAEIYPVFRELFKKGVST >Mature_423_residues MLQQVIDRRLSGKNKSIGNRERFLRRFRGQIREAVRRAVAGRSIHDIEQGEDITLPRRDVSEPVFGHGSGGIRETVHPGN RDYVRGDRIDRPSGGGAGGSGPGASQDAIGEDDFVFRITREEFMQYFFDDLALPHLVRTQLLPDAPEWKSRRAGFISEGT PTNLHVVRSMRVALSRRIALGGDTRRRLHELELQLAEAMRQTPPMPGEIHALTVQIEMLRRRLGKIPFFDPFDLRYRNRV RVPLPTAKAAMFCLMDVSGSMDEARKDIAKRFFILLYLFLRRHYERTDVIFIRHHTQATEVSEEEFFQSTETGGTVVSSA LTLMHQIIQARYPPGEWNIYGAQASDGDNWHQDSAKCRELLTGKLLPVSRYFAYVQVGEEDQNLWEEYTQVQDSSPNFAM RKISDAAEIYPVFRELFKKGVST
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=421, Percent_Identity=50.8313539192399, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48395; Mature: 48395
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQQVIDRRLSGKNKSIGNRERFLRRFRGQIREAVRRAVAGRSIHDIEQGEDITLPRRDV CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHC SEPVFGHGSGGIRETVHPGNRDYVRGDRIDRPSGGGAGGSGPGASQDAIGEDDFVFRITR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH EEFMQYFFDDLALPHLVRTQLLPDAPEWKSRRAGFISEGTPTNLHVVRSMRVALSRRIAL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GGDTRRRLHELELQLAEAMRQTPPMPGEIHALTVQIEMLRRRLGKIPFFDPFDLRYRNRV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEE RVPLPTAKAAMFCLMDVSGSMDEARKDIAKRFFILLYLFLRRHYERTDVIFIRHHTQATE CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH VSEEEFFQSTETGGTVVSSALTLMHQIIQARYPPGEWNIYGAQASDGDNWHQDSAKCREL CCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH LTGKLLPVSRYFAYVQVGEEDQNLWEEYTQVQDSSPNFAMRKISDAAEIYPVFRELFKKG HHCCCCHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC VST CCC >Mature Secondary Structure MLQQVIDRRLSGKNKSIGNRERFLRRFRGQIREAVRRAVAGRSIHDIEQGEDITLPRRDV CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHC SEPVFGHGSGGIRETVHPGNRDYVRGDRIDRPSGGGAGGSGPGASQDAIGEDDFVFRITR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH EEFMQYFFDDLALPHLVRTQLLPDAPEWKSRRAGFISEGTPTNLHVVRSMRVALSRRIAL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC GGDTRRRLHELELQLAEAMRQTPPMPGEIHALTVQIEMLRRRLGKIPFFDPFDLRYRNRV CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCEE RVPLPTAKAAMFCLMDVSGSMDEARKDIAKRFFILLYLFLRRHYERTDVIFIRHHTQATE CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH VSEEEFFQSTETGGTVVSSALTLMHQIIQARYPPGEWNIYGAQASDGDNWHQDSAKCREL CCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH LTGKLLPVSRYFAYVQVGEEDQNLWEEYTQVQDSSPNFAMRKISDAAEIYPVFRELFKKG HHCCCCHHHHHEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC VST CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA