| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91788025
Identifier: 91788025
GI number: 91788025
Start: 2242692
End: 2244539
Strand: Reverse
Name: 91788025
Synonym: Bpro_2152
Alternate gene names: NA
Gene position: 2244539-2242692 (Counterclockwise)
Preceding gene: 91788027
Following gene: 91788024
Centisome position: 43.16
GC content: 66.83
Gene sequence:
>1848_bases ATGAGCAGACCCGCGGCACCACCCCACGCATCCGGCACCCAGCCGCCAGACAACCGGCCCTGGACCGGGCGAATCATGGT GGCGATTCCACTGGCGGCCTTGCTGGCGGCATGCACATCGGTACCCCTGCCACCCTGGACACCTTCCTCGTCACCGCCGG TCGCGCGTGCACCCGCCAGCCCTCCCGCATCTGTAGTCACCGCACCACGACCGGCTGCGCCCCCGGCCGCGGTACAGATA TCTCCGGTTGCCCCGCCCTCGCGGCTACCTGCAACACCCTCCTCAGCGCCCGCTGACCCGCCAGCACCCTACAGCGCGGC TGTCGCCGCCCGGTTTCCGGCACCTTCGGTGATTTACGACACACCGGGCCTGCAAGCCGGCCGCACCAGCTTCACCACCC TGGCGGAAATCCAGGCCTGGCTGCGCGATCAGGCGATGGTCGCATCGCAAGCGCCTGGCGTTAAAGCTGCCGTTCTACCC ATCGGGAGGTCCCAGCGTGGCGAACCCCTTGAGGCGCTGGTCCTGACCCATGCCAGCGGCACAGACCCGTCCGCCCTCCA GGCTACGGGCCGGCCGACGGTGTTGCTGGTCGGGCAGCAGCATGGCGACGAGCCTGCCGGTAGCGAGGCGCTGCTGATCA TTGCCAGGGAGCTTGCACAGGGCCGTTTGCGGCCTGTGCTGGAACACATCAATGTGGTCATTGTTCCGCGCGCCAACCCC GACGGCGCAGCCACTGACCAGCGTGTGACCAGCGGCGGGCTGGACATGAACCGCGATCATTTGCTGCTCAACACGCCCGA GACCCAGGCGCTGGCTCAACTCACACGGGACTACCGTCCCACGGTGGTCGTGGATGCGCACGAATACACCGTGGTGGGCC GCTTCCTGCAAAAGTTTGGCACGGTGCAGAAGTTCGACACGCTGCTGCAATACGCCACCACCGCCAATATCCCCGAGTTT TTGACCAAAGCCGCCGAGGAGTGGTACCGCCGCCCCCTGCTGGCAGCCCTCAAGACCCAGGGCCTGAGCACCGAGTGGTA CTACACCACATCCACCGACCTGGCCGACAGGAAGATCTCCATGGGCAGCACCCAACCTGATACGGGCCGCAATGTGAACG GCCTGAAGAATTCCGTGAGCCTGCTGATCGAAACACGCGGCGTGGGCATCGGGCGGCTGCACATACAGCGGCGCGTGCAT ACCCACGTCACGGCCATCACCAGCGTGCTCGCCAGCACCGCCCAGCGCGCCAGCGACCTGAACCAGCTGCGCCCCTACCT CGACAAGGAAGTCAGCGCCCAGGCCTGCAGGGACGAAGCCATTGTGGAAGCGGCAGCTACGCCCGCCCAGTACGAGCTGC TCATGCTGGACCCGGTAAGCGGTGCCGACAAGGCCGTCACGGTGGACTGGGACTCGGCGCTCGCGCTGCGCAAGGTCAAG GTGCGCGCACGTCCCTGCGGGTACTGGCTGTCCGCAGACTCGGGCAAAGCCGTGGACCGGCTGCGCCTGCACGGCGTACA GGTGTTGCGTGTGGCAGAGCCCGGCTCCCTGCTGGGCGACAGCTACCGGGAAAGCTCGCGCACGACAGGCGAGCGGCAGG ACGTGCGCGGCACGATCGCCGGCGGCGCACCGGTCATCAAAGCACAGGTGAGCCTGCTGCGCGGTGTGGTCGATGTGCCG CGCGGCAGCTACTACGTGCCGCTCAACCAGCCTCTGGGCAACCTCGTGCTTGCCGCGCTGGAGCCCGACACACAGAGCAG CTATTTTGCCAACCAGATCCTGGATGGCCTGCAAAGCACCGTGCGCGTGATGGCAGAGCCGGCCATCAAATTCGAGGACC TGCCTTGA
Upstream 100 bases:
>100_bases CACACAAGCCGGGTAACATGCCTTGAACCTGCCGGCCCCAAGCCCGGGCCCGGCCAGGCGACAAACGCCCAGCGCGCAAG ACAACAAAGGAATGACAGCG
Downstream 100 bases:
>100_bases GCCATTAGCGGTGCACCAGCCGGCAGCCCACGGTCCTGACGCTCGTGTCTGACAGGAAGAGGATGTCATGGCTGACCGGG CGCAGAGGATTTTCGCGCCT
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: Carboxypeptidase; Zinc-Carboxypeptidase; Zinc Carboxypeptidase Family Protein; Zink-Carboxypeptidase; Zinc Carboxypeptidase Family; M14 Family Carboxypeptidase; Peptidase Family M; Secreted Protein
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSRPAAPPHASGTQPPDNRPWTGRIMVAIPLAALLAACTSVPLPPWTPSSSPPVARAPASPPASVVTAPRPAAPPAAVQI SPVAPPSRLPATPSSAPADPPAPYSAAVAARFPAPSVIYDTPGLQAGRTSFTTLAEIQAWLRDQAMVASQAPGVKAAVLP IGRSQRGEPLEALVLTHASGTDPSALQATGRPTVLLVGQQHGDEPAGSEALLIIARELAQGRLRPVLEHINVVIVPRANP DGAATDQRVTSGGLDMNRDHLLLNTPETQALAQLTRDYRPTVVVDAHEYTVVGRFLQKFGTVQKFDTLLQYATTANIPEF LTKAAEEWYRRPLLAALKTQGLSTEWYYTTSTDLADRKISMGSTQPDTGRNVNGLKNSVSLLIETRGVGIGRLHIQRRVH THVTAITSVLASTAQRASDLNQLRPYLDKEVSAQACRDEAIVEAAATPAQYELLMLDPVSGADKAVTVDWDSALALRKVK VRARPCGYWLSADSGKAVDRLRLHGVQVLRVAEPGSLLGDSYRESSRTTGERQDVRGTIAGGAPVIKAQVSLLRGVVDVP RGSYYVPLNQPLGNLVLAALEPDTQSSYFANQILDGLQSTVRVMAEPAIKFEDLP
Sequences:
>Translated_615_residues MSRPAAPPHASGTQPPDNRPWTGRIMVAIPLAALLAACTSVPLPPWTPSSSPPVARAPASPPASVVTAPRPAAPPAAVQI SPVAPPSRLPATPSSAPADPPAPYSAAVAARFPAPSVIYDTPGLQAGRTSFTTLAEIQAWLRDQAMVASQAPGVKAAVLP IGRSQRGEPLEALVLTHASGTDPSALQATGRPTVLLVGQQHGDEPAGSEALLIIARELAQGRLRPVLEHINVVIVPRANP DGAATDQRVTSGGLDMNRDHLLLNTPETQALAQLTRDYRPTVVVDAHEYTVVGRFLQKFGTVQKFDTLLQYATTANIPEF LTKAAEEWYRRPLLAALKTQGLSTEWYYTTSTDLADRKISMGSTQPDTGRNVNGLKNSVSLLIETRGVGIGRLHIQRRVH THVTAITSVLASTAQRASDLNQLRPYLDKEVSAQACRDEAIVEAAATPAQYELLMLDPVSGADKAVTVDWDSALALRKVK VRARPCGYWLSADSGKAVDRLRLHGVQVLRVAEPGSLLGDSYRESSRTTGERQDVRGTIAGGAPVIKAQVSLLRGVVDVP RGSYYVPLNQPLGNLVLAALEPDTQSSYFANQILDGLQSTVRVMAEPAIKFEDLP >Mature_614_residues SRPAAPPHASGTQPPDNRPWTGRIMVAIPLAALLAACTSVPLPPWTPSSSPPVARAPASPPASVVTAPRPAAPPAAVQIS PVAPPSRLPATPSSAPADPPAPYSAAVAARFPAPSVIYDTPGLQAGRTSFTTLAEIQAWLRDQAMVASQAPGVKAAVLPI GRSQRGEPLEALVLTHASGTDPSALQATGRPTVLLVGQQHGDEPAGSEALLIIARELAQGRLRPVLEHINVVIVPRANPD GAATDQRVTSGGLDMNRDHLLLNTPETQALAQLTRDYRPTVVVDAHEYTVVGRFLQKFGTVQKFDTLLQYATTANIPEFL TKAAEEWYRRPLLAALKTQGLSTEWYYTTSTDLADRKISMGSTQPDTGRNVNGLKNSVSLLIETRGVGIGRLHIQRRVHT HVTAITSVLASTAQRASDLNQLRPYLDKEVSAQACRDEAIVEAAATPAQYELLMLDPVSGADKAVTVDWDSALALRKVKV RARPCGYWLSADSGKAVDRLRLHGVQVLRVAEPGSLLGDSYRESSRTTGERQDVRGTIAGGAPVIKAQVSLLRGVVDVPR GSYYVPLNQPLGNLVLAALEPDTQSSYFANQILDGLQSTVRVMAEPAIKFEDLP
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65502; Mature: 65371
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPAAPPHASGTQPPDNRPWTGRIMVAIPLAALLAACTSVPLPPWTPSSSPPVARAPAS CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PPASVVTAPRPAAPPAAVQISPVAPPSRLPATPSSAPADPPAPYSAAVAARFPAPSVIYD CCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEC TPGLQAGRTSFTTLAEIQAWLRDQAMVASQAPGVKAAVLPIGRSQRGEPLEALVLTHASG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCC TDPSALQATGRPTVLLVGQQHGDEPAGSEALLIIARELAQGRLRPVLEHINVVIVPRANP CCCHHHCCCCCCEEEEEECCCCCCCCCCCEEHEEHHHHHHHHHHHHHHHCCEEEEECCCC DGAATDQRVTSGGLDMNRDHLLLNTPETQALAQLTRDYRPTVVVDAHEYTVVGRFLQKFG CCCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHC TVQKFDTLLQYATTANIPEFLTKAAEEWYRRPLLAALKTQGLSTEWYYTTSTDLADRKIS CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEC MGSTQPDTGRNVNGLKNSVSLLIETRGVGIGRLHIQRRVHTHVTAITSVLASTAQRASDL CCCCCCCCCCCCCHHHHCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLRPYLDKEVSAQACRDEAIVEAAATPAQYELLMLDPVSGADKAVTVDWDSALALRKVK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHH VRARPCGYWLSADSGKAVDRLRLHGVQVLRVAEPGSLLGDSYRESSRTTGERQDVRGTIA EEECCCCEEEECCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHCCEEEC GGAPVIKAQVSLLRGVVDVPRGSYYVPLNQPLGNLVLAALEPDTQSSYFANQILDGLQST CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH VRVMAEPAIKFEDLP HHHHHCCCCCCCCCC >Mature Secondary Structure SRPAAPPHASGTQPPDNRPWTGRIMVAIPLAALLAACTSVPLPPWTPSSSPPVARAPAS CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PPASVVTAPRPAAPPAAVQISPVAPPSRLPATPSSAPADPPAPYSAAVAARFPAPSVIYD CCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEC TPGLQAGRTSFTTLAEIQAWLRDQAMVASQAPGVKAAVLPIGRSQRGEPLEALVLTHASG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCC TDPSALQATGRPTVLLVGQQHGDEPAGSEALLIIARELAQGRLRPVLEHINVVIVPRANP CCCHHHCCCCCCEEEEEECCCCCCCCCCCEEHEEHHHHHHHHHHHHHHHCCEEEEECCCC DGAATDQRVTSGGLDMNRDHLLLNTPETQALAQLTRDYRPTVVVDAHEYTVVGRFLQKFG CCCCCCCHHHCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHC TVQKFDTLLQYATTANIPEFLTKAAEEWYRRPLLAALKTQGLSTEWYYTTSTDLADRKIS CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEC MGSTQPDTGRNVNGLKNSVSLLIETRGVGIGRLHIQRRVHTHVTAITSVLASTAQRASDL CCCCCCCCCCCCCHHHHCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLRPYLDKEVSAQACRDEAIVEAAATPAQYELLMLDPVSGADKAVTVDWDSALALRKVK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHH VRARPCGYWLSADSGKAVDRLRLHGVQVLRVAEPGSLLGDSYRESSRTTGERQDVRGTIA EEECCCCEEEECCCCCHHHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHCCEEEC GGAPVIKAQVSLLRGVVDVPRGSYYVPLNQPLGNLVLAALEPDTQSSYFANQILDGLQST CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH VRVMAEPAIKFEDLP HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA