| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ubiE [H]
Identifier: 91787953
GI number: 91787953
Start: 2164325
End: 2165122
Strand: Direct
Name: ubiE [H]
Synonym: Bpro_2080
Alternate gene names: 91787953
Gene position: 2164325-2165122 (Clockwise)
Preceding gene: 91787949
Following gene: 91787954
Centisome position: 41.62
GC content: 62.28
Gene sequence:
>798_bases ATGGCAACGTTTGTGGCGACCGACCCGGAGGCCTATGAAGGCTATGTTGGCCGAGGCAGTCAGCGTCTTGCTCCTGCATT TGTGCGGTTCGCCGGTGTCTCGGCGAGTGAGCGAGCGCTTGACGTCGGTTGCGGGACCGGGCATTTGACGCGCGCAATAG CGGCGGCGACCGCAGTAGCGACTGGCATCGACCTCTCGGCGCCGTATGTGGAATTCGCGCGGCGCGTCACCGCAGACCCT GCGATCACTTTTCTCGTTGGCGATGCTCTTGATCTTCCATATCAGGAGGGGGTGTTCGAGCGCGCGCTCTCGATGCTCGC CCTGGATGTGTTGCCCGACTCGGTACAGGGTTTGCGCGAGATGCGCAGAGTCACCCAGCCAGGGGGTGTTGTCGCGGTGG TGGTCAACAACTTCCGCAGCGGTTGGACACCGTTCAGTCTGGTTTGGGACGCTGCCGCGGTGCTCGATCCGGAGGGGGCG GCCATGCGCGACGAGATGGTCTCCAAGCCGTTGGGATGGCCGGGCGGCCTGGCGAGATTGTTCGCCACCGTGGGCTTCCA CGACATCGTTGAGGAGCAACTCAGCGCGATCTTTGAGTACCAGTCGTTCGAGGACTATTGGTCCACGTTCCTCACGGGAC AGGGCAAGACTGGAAGCTATGTGACAAATCTCGGGAACTCAAAACGCGGGGAATTGGAGCGTCACGTTCGAGCGGCGTAT CTGTGCGGCATGGCAGATGGTCCGCGTGCCCTGACCACCTCGTTCTGGGCTGTGCGCGGCGAAGTTTCATCCCACTGA
Upstream 100 bases:
>100_bases GCCGACCTTCGCGCGAGCAAACGAAAGCAGACCTTCACATGTCCCCGCGGGCGCGAAGCGGCGTAAAATGACCTGCATTC GATCTGCGAGGAGGGCTGAC
Downstream 100 bases:
>100_bases GCGGCAGCTTAACGCTGTTCTGACTCTCTGCAATGGGTCGTCAAGAGCCGGTCATGAACGACCGTGGGCTGGAAATTAAT TGGGTTGCCGGTAAGCCGAC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MATFVATDPEAYEGYVGRGSQRLAPAFVRFAGVSASERALDVGCGTGHLTRAIAAATAVATGIDLSAPYVEFARRVTADP AITFLVGDALDLPYQEGVFERALSMLALDVLPDSVQGLREMRRVTQPGGVVAVVVNNFRSGWTPFSLVWDAAAVLDPEGA AMRDEMVSKPLGWPGGLARLFATVGFHDIVEEQLSAIFEYQSFEDYWSTFLTGQGKTGSYVTNLGNSKRGELERHVRAAY LCGMADGPRALTTSFWAVRGEVSSH
Sequences:
>Translated_265_residues MATFVATDPEAYEGYVGRGSQRLAPAFVRFAGVSASERALDVGCGTGHLTRAIAAATAVATGIDLSAPYVEFARRVTADP AITFLVGDALDLPYQEGVFERALSMLALDVLPDSVQGLREMRRVTQPGGVVAVVVNNFRSGWTPFSLVWDAAAVLDPEGA AMRDEMVSKPLGWPGGLARLFATVGFHDIVEEQLSAIFEYQSFEDYWSTFLTGQGKTGSYVTNLGNSKRGELERHVRAAY LCGMADGPRALTTSFWAVRGEVSSH >Mature_264_residues ATFVATDPEAYEGYVGRGSQRLAPAFVRFAGVSASERALDVGCGTGHLTRAIAAATAVATGIDLSAPYVEFARRVTADPA ITFLVGDALDLPYQEGVFERALSMLALDVLPDSVQGLREMRRVTQPGGVVAVVVNNFRSGWTPFSLVWDAAAVLDPEGAA MRDEMVSKPLGWPGGLARLFATVGFHDIVEEQLSAIFEYQSFEDYWSTFLTGQGKTGSYVTNLGNSKRGELERHVRAAYL CGMADGPRALTTSFWAVRGEVSSH
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 28477; Mature: 28346
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFVATDPEAYEGYVGRGSQRLAPAFVRFAGVSASERALDVGCGTGHLTRAIAAATAVA CCCEECCCCHHHCCHHCCCCCHHHHHHHHHHCCCCCCHHEECCCCCHHHHHHHHHHHHHH TGIDLSAPYVEFARRVTADPAITFLVGDALDLPYQEGVFERALSMLALDVLPDSVQGLRE HCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH MRRVTQPGGVVAVVVNNFRSGWTPFSLVWDAAAVLDPEGAAMRDEMVSKPLGWPGGLARL HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHH FATVGFHDIVEEQLSAIFEYQSFEDYWSTFLTGQGKTGSYVTNLGNSKRGELERHVRAAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHH LCGMADGPRALTTSFWAVRGEVSSH HHCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure ATFVATDPEAYEGYVGRGSQRLAPAFVRFAGVSASERALDVGCGTGHLTRAIAAATAVA CCEECCCCHHHCCHHCCCCCHHHHHHHHHHCCCCCCHHEECCCCCHHHHHHHHHHHHHH TGIDLSAPYVEFARRVTADPAITFLVGDALDLPYQEGVFERALSMLALDVLPDSVQGLRE HCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH MRRVTQPGGVVAVVVNNFRSGWTPFSLVWDAAAVLDPEGAAMRDEMVSKPLGWPGGLARL HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHH FATVGFHDIVEEQLSAIFEYQSFEDYWSTFLTGQGKTGSYVTNLGNSKRGELERHVRAAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHH LCGMADGPRALTTSFWAVRGEVSSH HHCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA