| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787949
Identifier: 91787949
GI number: 91787949
Start: 2160148
End: 2160639
Strand: Direct
Name: 91787949
Synonym: Bpro_2074
Alternate gene names: NA
Gene position: 2160148-2160639 (Clockwise)
Preceding gene: 91787948
Following gene: 91787953
Centisome position: 41.54
GC content: 69.51
Gene sequence:
>492_bases ATGAATCGCTTTCGGCGAGCGGGCCTCGCGGCAGCAGCCCTGGCGCTGCTGCTGCCGCTGTCGCAAAGGGGCGGCGCGGT GCAGTCGGAAGACTCCGACGACCAGGCGCTGCTGGTCGACGCCGACTACGCAGCCGGCCGCGCGGCGCTCAAGGCCGGTG ACCCGGCCACCGCGTTGCGGCGTTACCAGGCCGCGCTCAAACGCTTTCCGGACGCGGCCGATGTGCACAACGAACTCGGC TTCACGCACCGCAAGCTGCGCCAGATGGACAAGGCGTTCGAGCACTACAAGCGCGCGCTGGCCATCAAGCCCGACCACCG CGGCGCCCACGAGTACATCGGCGAGGCGTATCTGATGGTCGAGGACCTGGCCGGCGCCGAGCGGCACCTGGCCGCGTTGC GCTCGCTGTGCCTGGTGCCGTGCGACGAGTTGAAGGATCTGGAGACGGCGATCGCCGAGTTCAAGTCCATCAAGGCGGCG CGGCCGCCTTGA
Upstream 100 bases:
>100_bases ACAGGGCGCGCGCGCACTACGCCAGACTGGTCGAACTCACGCGCGACGCCGACACCCCCCTGCCCGAGATCACGCGCGCC AAGACCTACCTGGCGAGCCG
Downstream 100 bases:
>100_bases GCTCTCCCGAAGGAATGGCCGCCGGGTCCATCCACATGGCCTCCCAGACGTGGCCGTCGGGATCCGCCAGGTTGCGGTTG TACATGAAGCCCAGATCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNRFRRAGLAAAALALLLPLSQRGGAVQSEDSDDQALLVDADYAAGRAALKAGDPATALRRYQAALKRFPDAADVHNELG FTHRKLRQMDKAFEHYKRALAIKPDHRGAHEYIGEAYLMVEDLAGAERHLAALRSLCLVPCDELKDLETAIAEFKSIKAA RPP
Sequences:
>Translated_163_residues MNRFRRAGLAAAALALLLPLSQRGGAVQSEDSDDQALLVDADYAAGRAALKAGDPATALRRYQAALKRFPDAADVHNELG FTHRKLRQMDKAFEHYKRALAIKPDHRGAHEYIGEAYLMVEDLAGAERHLAALRSLCLVPCDELKDLETAIAEFKSIKAA RPP >Mature_163_residues MNRFRRAGLAAAALALLLPLSQRGGAVQSEDSDDQALLVDADYAAGRAALKAGDPATALRRYQAALKRFPDAADVHNELG FTHRKLRQMDKAFEHYKRALAIKPDHRGAHEYIGEAYLMVEDLAGAERHLAALRSLCLVPCDELKDLETAIAEFKSIKAA RPP
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17861; Mature: 17861
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFRRAGLAAAALALLLPLSQRGGAVQSEDSDDQALLVDADYAAGRAALKAGDPATALR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHCHHHHCCCCHHHHHH RYQAALKRFPDAADVHNELGFTHRKLRQMDKAFEHYKRALAIKPDHRGAHEYIGEAYLMV HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EDLAGAERHLAALRSLCLVPCDELKDLETAIAEFKSIKAARPP HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNRFRRAGLAAAALALLLPLSQRGGAVQSEDSDDQALLVDADYAAGRAALKAGDPATALR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHCHHHHCCCCHHHHHH RYQAALKRFPDAADVHNELGFTHRKLRQMDKAFEHYKRALAIKPDHRGAHEYIGEAYLMV HHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EDLAGAERHLAALRSLCLVPCDELKDLETAIAEFKSIKAARPP HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA