| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yxiO [H]
Identifier: 91787920
GI number: 91787920
Start: 2123488
End: 2124798
Strand: Direct
Name: yxiO [H]
Synonym: Bpro_2044
Alternate gene names: 91787920
Gene position: 2123488-2124798 (Clockwise)
Preceding gene: 91787919
Following gene: 91787923
Centisome position: 40.83
GC content: 63.39
Gene sequence:
>1311_bases ATGGCCCTTTTTTCCCAGGATGCCCTCAACCCCGGCGTACGCAAGCGCGAGGTGTTTGGCTGGGCCATGTACGACTTTGC GAACTCGGGCTACACCACTGTCGTGATCACGGCAGTGTTTGCCGCCTATTTCGTGGGCGGCATTGCGCAGAAGGCCGAGT GGGCCACCTTTGCCTGGACGGCGGCGCTCAGCGTGTCCTACGCGATTGTCATGCTCACCATGCCCAGCATCGGTGCCTAT GCCGACCTGCGCGCAGCCAAGAAACGGCTGCTGATGCTGACGACGATGGGTTGCGTGGTGACCACCGCAGCGCTCGCGCT CGCAGGGCCTGGCAGCGTGGCGTTCGCCATGTTGCTGATCATTCTGTCGAACACCTTTTTTTCGTATGGCGAATCACTGA CCGCCGCCTTCCTGCCGGAGCTGGCCAGGGCCGAGGCCTTGGGCAAGGTCAGCGGCTGGGGCTGGAGTTTTGGCTATTTT GGCGGCATGCTGGCGCTGGGGCTTTGCCTGGGCTACGTGATTTGGGCCCAAGGCCAGGGCATCAGGGCCGAGCAGTTTGT TCCCGTCACCATGCTGATCACGGCGGTGATCTACGGCTTGGCATCGCTGGTCACGTTCCGCCTGCTCAATGAACGGGCCC GGCCCAACCCGGCTGCATTGCGTCAGGGCGGTATCAAGGCTTCGCTTGCGCAGCTGCACCAGACTTTTCGCCAGGCCAGG CGTTACCGGGATTTCATGTGGCTGCTGGCCTGCGCCGTGTTTTACCAGGGGGGCGTGGCCGTGGCCATCGCGCTGGCTGC GATTTACGCCGAGCAGGTGATTGGCTTCCAGCCGCAGGAAACCATGGTGCTGATCTTCGTGCTCAACCTTGCAGCCGCCG GCGGCGCGTTCGCCTTTGGTTATTTCCAGGATCGCATCGGCCACAAGCTGGCGCTAGGCATCACGCTGGTGGGCTGGATC GCCACTTGCGTGATCGCTGCCGTCACAACGACCAAAGGCGGCTTCTGGTACGCCGCCGCGATCGCGGGCCTGTGCATGGG CTCGAGCCAGTCGGCTGGCCGCGCCATGGCCGGCATGTTCGCGCCGAAAAGGCAACTGGCGGAGTTTTACGGCCTGTGGA CCTTCGCGATCCGCCTGGCCAGCATCATCGGGCCGTTAAGCTACGGCGCCATCACCTGGATGACGGGAGGTAACCAGCGC ATAGCCATTCTGTCGACGGCCGTGCTGTTTGCCGTGGGATTGGTGCTGCTGATTCCGGTGAATGTGCAACGCGGGCGTGA AGCCGCGCTGCAGGCTGACGCCCAGATCTGA
Upstream 100 bases:
>100_bases TGCGGTCCGGGCAACTCCGGCCACGGCGGTGGCCGGCAACCGCGCCATCTGCACTGACATCTCCGTGGACTATGCTTGGC CCCTCTTCAGGAGCTGAACC
Downstream 100 bases:
>100_bases GGAAGCGCTCAACAAGCCGTTGCGAACGAGGTCGAGGGGATGCCTGCACCTTCCCTCGGGGCGCGCAGGCAGCTATTAAA AATGTAGCGAATCCACGGTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWTAALSVSYAIVMLTMPSIGAY ADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLIILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYF GGMLALGLCLGYVIWAQGQGIRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFGYFQDRIGHKLALGITLVGWI ATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMFAPKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQR IAILSTAVLFAVGLVLLIPVNVQRGREAALQADAQI
Sequences:
>Translated_436_residues MALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWTAALSVSYAIVMLTMPSIGAY ADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLIILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYF GGMLALGLCLGYVIWAQGQGIRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFGYFQDRIGHKLALGITLVGWI ATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMFAPKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQR IAILSTAVLFAVGLVLLIPVNVQRGREAALQADAQI >Mature_435_residues ALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWTAALSVSYAIVMLTMPSIGAYA DLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLIILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYFG GMLALGLCLGYVIWAQGQGIRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQARR YRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFGYFQDRIGHKLALGITLVGWIA TCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMFAPKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQRI AILSTAVLFAVGLVLLIPVNVQRGREAALQADAQI
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46536; Mature: 46405
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWT CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AALSVSYAIVMLTMPSIGAYADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLI HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYFGGMLALGLCLGYVIWAQGQG HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC IRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHH RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH YFQDRIGHKLALGITLVGWIATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHC APKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQRIAILSTAVLFAVGLVLLIPV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCC NVQRGREAALQADAQI CHHCCHHHHHHCCCCC >Mature Secondary Structure ALFSQDALNPGVRKREVFGWAMYDFANSGYTTVVITAVFAAYFVGGIAQKAEWATFAWT CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AALSVSYAIVMLTMPSIGAYADLRAAKKRLLMLTTMGCVVTTAALALAGPGSVAFAMLLI HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILSNTFFSYGESLTAAFLPELARAEALGKVSGWGWSFGYFGGMLALGLCLGYVIWAQGQG HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC IRAEQFVPVTMLITAVIYGLASLVTFRLLNERARPNPAALRQGGIKASLAQLHQTFRQAR CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHH RYRDFMWLLACAVFYQGGVAVAIALAAIYAEQVIGFQPQETMVLIFVLNLAAAGGAFAFG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH YFQDRIGHKLALGITLVGWIATCVIAAVTTTKGGFWYAAAIAGLCMGSSQSAGRAMAGMF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHC APKRQLAEFYGLWTFAIRLASIIGPLSYGAITWMTGGNQRIAILSTAVLFAVGLVLLIPV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCC NVQRGREAALQADAQI CHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]