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The map label for this gene is potC [H]

Identifier: 91787898

GI number: 91787898

Start: 2092712

End: 2093611

Strand: Direct

Name: potC [H]

Synonym: Bpro_2022

Alternate gene names: 91787898

Gene position: 2092712-2093611 (Clockwise)

Preceding gene: 91787897

Following gene: 91787899

Centisome position: 40.24

GC content: 62.11

Gene sequence:

>900_bases
ATGATGGCAACGGCAACTTCAATGACCCCTTCAGTGACTTCTCCCGCTGCGTCCTCAACCACTTCCCGGGCCGGCCGCGG
ATCGTTTGGCTGGGTCATGGGCATCCTGGCCGGGCTGGGCCTGCTCATCGCGGCGTTGCCGGTGGTGATCATCCTGATCA
TGTCGTTTTCGGGCGGCACCAACCTGGATTTTCCGCCGCAGTCCCTGTCGCTGCGATGGTACGGCGCTGCTTTCGATGTG
CTGTTTGGCGACAAGAGTGAGGGCACGATGTCGGCCTTCAGCGCCATGACCAGCAGCCTGATCGTGGGCCTCATCACCAT
GCTGGCCAGCGTCAGTGTCTGTGTGCCGCTGTCTTATGCCGTGGTGCGCAGCCACGGGCGCTGGCGCCACCTGGCCGAGC
TGCTGTTCACCCTGCCCATCGTGTTTCCGCTGGTGGTGCTGGGCGTGGCCTACCTGCTCATGACCGAAGCGCTCAGCCGG
GAGACTGGCGTTGACCTGGGCCTGTTCCGTCTGGCCATTCCGCACATCACGCTGGCGCTGCCTTTTGTTTTACGCAATTG
CCTGAGTGCCATGAACGGGGTTGGGCTGGACCTGGAAGAAGCCGCCATGTCGCTGGGGGCCTCGCCCTTGCGCGCCATCC
TGCATGTCGTCGTGCCACTGATGAAGCCGGGAATCATGGCTGGGCTGATCTTCGCCTTCATCATTTCCTTCAACGAGTTC
ACGGTGACTTTCTTCATGTACACGATCGACGTGCGCACGCTGCCGATCTGGATGTACAGCCGCACCGTCTCGTCGCTGGA
TCCCACCACGCTGGCCATTTCGACCCTGATCATTGCGCTGGACGTGGCGCTGATCGCCTGGGTCGACAAGCTCGTGGCCG
GCAAGGGCAGTCTGTTTTGA

Upstream 100 bases:

>100_bases
GCGCGGCGGCGGCGGGCGTCACCCTCATTGCCATCACGCTGGCAACCCTGATGGCCGCCACCTGGCTGTCCACACGCACC
ACCCAATGGCAGGGAGCACG

Downstream 100 bases:

>100_bases
GTGCTGCCTCCAACAACCTGATTAACGAAAGACTGCATATGGACAAGCATCTGGAACTGCGGGGCGTCAGCAAACGCTTC
GGCACGGCGAACGTCCTCAG

Product: binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MMATATSMTPSVTSPAASSTTSRAGRGSFGWVMGILAGLGLLIAALPVVIILIMSFSGGTNLDFPPQSLSLRWYGAAFDV
LFGDKSEGTMSAFSAMTSSLIVGLITMLASVSVCVPLSYAVVRSHGRWRHLAELLFTLPIVFPLVVLGVAYLLMTEALSR
ETGVDLGLFRLAIPHITLALPFVLRNCLSAMNGVGLDLEEAAMSLGASPLRAILHVVVPLMKPGIMAGLIFAFIISFNEF
TVTFFMYTIDVRTLPIWMYSRTVSSLDPTTLAISTLIIALDVALIAWVDKLVAGKGSLF

Sequences:

>Translated_299_residues
MMATATSMTPSVTSPAASSTTSRAGRGSFGWVMGILAGLGLLIAALPVVIILIMSFSGGTNLDFPPQSLSLRWYGAAFDV
LFGDKSEGTMSAFSAMTSSLIVGLITMLASVSVCVPLSYAVVRSHGRWRHLAELLFTLPIVFPLVVLGVAYLLMTEALSR
ETGVDLGLFRLAIPHITLALPFVLRNCLSAMNGVGLDLEEAAMSLGASPLRAILHVVVPLMKPGIMAGLIFAFIISFNEF
TVTFFMYTIDVRTLPIWMYSRTVSSLDPTTLAISTLIIALDVALIAWVDKLVAGKGSLF
>Mature_299_residues
MMATATSMTPSVTSPAASSTTSRAGRGSFGWVMGILAGLGLLIAALPVVIILIMSFSGGTNLDFPPQSLSLRWYGAAFDV
LFGDKSEGTMSAFSAMTSSLIVGLITMLASVSVCVPLSYAVVRSHGRWRHLAELLFTLPIVFPLVVLGVAYLLMTEALSR
ETGVDLGLFRLAIPHITLALPFVLRNCLSAMNGVGLDLEEAAMSLGASPLRAILHVVVPLMKPGIMAGLIFAFIISFNEF
TVTFFMYTIDVRTLPIWMYSRTVSSLDPTTLAISTLIIALDVALIAWVDKLVAGKGSLF

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=222, Percent_Identity=25.2252252252252, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787081, Length=254, Percent_Identity=26.7716535433071, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787714, Length=241, Percent_Identity=28.6307053941909, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31855; Mature: 31855

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMATATSMTPSVTSPAASSTTSRAGRGSFGWVMGILAGLGLLIAALPVVIILIMSFSGGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLDFPPQSLSLRWYGAAFDVLFGDKSEGTMSAFSAMTSSLIVGLITMLASVSVCVPLSYA
CCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRSHGRWRHLAELLFTLPIVFPLVVLGVAYLLMTEALSRETGVDLGLFRLAIPHITLAL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PFVLRNCLSAMNGVGLDLEEAAMSLGASPLRAILHVVVPLMKPGIMAGLIFAFIISFNEF
HHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH
TVTFFMYTIDVRTLPIWMYSRTVSSLDPTTLAISTLIIALDVALIAWVDKLVAGKGSLF
HEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMATATSMTPSVTSPAASSTTSRAGRGSFGWVMGILAGLGLLIAALPVVIILIMSFSGGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NLDFPPQSLSLRWYGAAFDVLFGDKSEGTMSAFSAMTSSLIVGLITMLASVSVCVPLSYA
CCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRSHGRWRHLAELLFTLPIVFPLVVLGVAYLLMTEALSRETGVDLGLFRLAIPHITLAL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PFVLRNCLSAMNGVGLDLEEAAMSLGASPLRAILHVVVPLMKPGIMAGLIFAFIISFNEF
HHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH
TVTFFMYTIDVRTLPIWMYSRTVSSLDPTTLAISTLIIALDVALIAWVDKLVAGKGSLF
HEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]