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The map label for this gene is potD-B [H]

Identifier: 91787896

GI number: 91787896

Start: 2090703

End: 2091794

Strand: Direct

Name: potD-B [H]

Synonym: Bpro_2020

Alternate gene names: 91787896

Gene position: 2090703-2091794 (Clockwise)

Preceding gene: 91787891

Following gene: 91787897

Centisome position: 40.2

GC content: 61.17

Gene sequence:

>1092_bases
ATGACACACGATATCCAACGACGCACCTTGGTCAAGGCAGGCGCCGCGCTGGCCTCCACGGCACTGGGCTTTCCGGCACT
CAATGCGCTTGCCCAAAATCGCAAGTTCTCAGGGAAAACCCTGCGTATCCTGACCTGGTCGGACGATACGGGTCTGGCGG
TGCTACGCAACATTGCGCAAACCTTTGAAGCCCAAACGGGTGCCAAGGTCATTGCCGACCGCACGGGCAGCACCTCCGAG
ATGGTCGCCAAGCTCAAGGCTGGCGGCAATCGCCCGCAATACGATGTGATCACGCTGGCAGGTGTCGGTGCCGTCACCCT
GGCCAATGCCGGCCTGCTGGAAAAGCCCGACCTGAACCAGTTGCCCAACCTGCAGAGCGTGGACGCGCGGTTTCGCACCG
GGGCCGATGGGCACGGCATTGGTTACCTGCTGTGGACTGGCGGCATGCTGTACAACACGCGTACCTTCAAGGCGGCACCG
ACCAGCTACGAGGAAATGTGGAACCCCAAATACGCCAAGAGGGTGTTTTTGCCGCCGGCGACCTGGACGGACTCGCTGGA
CACCATCGTGGCCGCGGCCAAGCTGACCGGCGGCAGCGCGACCAATGTGGAAGGCGGCTTCAAGAAGCTGGCCGAGCTCA
AGGATCGGGTCCTGACCTTTGGCGAGAATCCGACGCAGATCGCCGAACTGTTCCGCTCCAATTCGCTGGACATTGGTGCG
GTATACGCCCCGGCCTTCTTTGCCAAGGAACTCAAGGATCCCAACTCCGGTCTGGGCGCCACGTACAACCTGAAGGAAGG
CTTTTTTGCCGACCTGATGTACACCATCATGCCCAAGGCCCATCCCGGCGAATCGTCGCTGATCCATGCCTTCATCAACC
ACTCGCTGGACCCGGTCGTGCAAGGGAAAATGGCCGAGGATGTGCTCAACGGGCCCGTCAACCTCAAGGCCGTGCTCTCG
CCTGAGGCGCAAAAGAGCCCCTTCATCATCAAGCCCGAGCAGCTCGGCTCCACGGCGGTGATTCATGACAAGGCGGTGAT
TGCCGCGGTGCGCGACAGCTGGATCAAGCGTTATACGCAGACCTTCTCCTGA

Upstream 100 bases:

>100_bases
GCCATTACGATGACTTTGAGATTTTTTGAGGGCTGCGAAGCGGGTATTCAGCAAGTCAGCAAATTATTCTTATATGTACA
CCCACACAGGAGAAACCGAT

Downstream 100 bases:

>100_bases
TCGCCTGCAGTTGATAAACGACCGGGCCGCGTCCTGCGGTCCGGTCGTCAGGAAAGTTTCACCATGTCCACTCTGAATTC
CGGCCGCCTCCGGCTCGCCT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: SPBP [H]

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTHDIQRRTLVKAGAALASTALGFPALNALAQNRKFSGKTLRILTWSDDTGLAVLRNIAQTFEAQTGAKVIADRTGSTSE
MVAKLKAGGNRPQYDVITLAGVGAVTLANAGLLEKPDLNQLPNLQSVDARFRTGADGHGIGYLLWTGGMLYNTRTFKAAP
TSYEEMWNPKYAKRVFLPPATWTDSLDTIVAAAKLTGGSATNVEGGFKKLAELKDRVLTFGENPTQIAELFRSNSLDIGA
VYAPAFFAKELKDPNSGLGATYNLKEGFFADLMYTIMPKAHPGESSLIHAFINHSLDPVVQGKMAEDVLNGPVNLKAVLS
PEAQKSPFIIKPEQLGSTAVIHDKAVIAAVRDSWIKRYTQTFS

Sequences:

>Translated_363_residues
MTHDIQRRTLVKAGAALASTALGFPALNALAQNRKFSGKTLRILTWSDDTGLAVLRNIAQTFEAQTGAKVIADRTGSTSE
MVAKLKAGGNRPQYDVITLAGVGAVTLANAGLLEKPDLNQLPNLQSVDARFRTGADGHGIGYLLWTGGMLYNTRTFKAAP
TSYEEMWNPKYAKRVFLPPATWTDSLDTIVAAAKLTGGSATNVEGGFKKLAELKDRVLTFGENPTQIAELFRSNSLDIGA
VYAPAFFAKELKDPNSGLGATYNLKEGFFADLMYTIMPKAHPGESSLIHAFINHSLDPVVQGKMAEDVLNGPVNLKAVLS
PEAQKSPFIIKPEQLGSTAVIHDKAVIAAVRDSWIKRYTQTFS
>Mature_362_residues
THDIQRRTLVKAGAALASTALGFPALNALAQNRKFSGKTLRILTWSDDTGLAVLRNIAQTFEAQTGAKVIADRTGSTSEM
VAKLKAGGNRPQYDVITLAGVGAVTLANAGLLEKPDLNQLPNLQSVDARFRTGADGHGIGYLLWTGGMLYNTRTFKAAPT
SYEEMWNPKYAKRVFLPPATWTDSLDTIVAAAKLTGGSATNVEGGFKKLAELKDRVLTFGENPTQIAELFRSNSLDIGAV
YAPAFFAKELKDPNSGLGATYNLKEGFFADLMYTIMPKAHPGESSLIHAFINHSLDPVVQGKMAEDVLNGPVNLKAVLSP
EAQKSPFIIKPEQLGSTAVIHDKAVIAAVRDSWIKRYTQTFS

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine. Polyamine binding protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein potD/potF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR001188 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 39127; Mature: 38996

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDIQRRTLVKAGAALASTALGFPALNALAQNRKFSGKTLRILTWSDDTGLAVLRNIAQ
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHH
TFEAQTGAKVIADRTGSTSEMVAKLKAGGNRPQYDVITLAGVGAVTLANAGLLEKPDLNQ
HHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCC
LPNLQSVDARFRTGADGHGIGYLLWTGGMLYNTRTFKAAPTSYEEMWNPKYAKRVFLPPA
CCCCHHHHHHHHCCCCCCCEEEEEEECCEEEECEEECCCCCCHHHHCCCCHHCEEECCCC
TWTDSLDTIVAAAKLTGGSATNVEGGFKKLAELKDRVLTFGENPTQIAELFRSNSLDIGA
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEE
VYAPAFFAKELKDPNSGLGATYNLKEGFFADLMYTIMPKAHPGESSLIHAFINHSLDPVV
HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH
QGKMAEDVLNGPVNLKAVLSPEAQKSPFIIKPEQLGSTAVIHDKAVIAAVRDSWIKRYTQ
CCHHHHHHHCCCCCEEEEECCCCCCCCEEECHHHCCCEEEEEHHHHHHHHHHHHHHHHHH
TFS
HCC
>Mature Secondary Structure 
THDIQRRTLVKAGAALASTALGFPALNALAQNRKFSGKTLRILTWSDDTGLAVLRNIAQ
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHH
TFEAQTGAKVIADRTGSTSEMVAKLKAGGNRPQYDVITLAGVGAVTLANAGLLEKPDLNQ
HHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCCCC
LPNLQSVDARFRTGADGHGIGYLLWTGGMLYNTRTFKAAPTSYEEMWNPKYAKRVFLPPA
CCCCHHHHHHHHCCCCCCCEEEEEEECCEEEECEEECCCCCCHHHHCCCCHHCEEECCCC
TWTDSLDTIVAAAKLTGGSATNVEGGFKKLAELKDRVLTFGENPTQIAELFRSNSLDIGA
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEE
VYAPAFFAKELKDPNSGLGATYNLKEGFFADLMYTIMPKAHPGESSLIHAFINHSLDPVV
HHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHH
QGKMAEDVLNGPVNLKAVLSPEAQKSPFIIKPEQLGSTAVIHDKAVIAAVRDSWIKRYTQ
CCHHHHHHHCCCCCEEEEECCCCCCCCEEECHHHCCCEEEEEHHHHHHHHHHHHHHHHHH
TFS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]