Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787887

Identifier: 91787887

GI number: 91787887

Start: 2081266

End: 2082771

Strand: Direct

Name: 91787887

Synonym: Bpro_2011

Alternate gene names: NA

Gene position: 2081266-2082771 (Clockwise)

Preceding gene: 91787886

Following gene: 91787888

Centisome position: 40.02

GC content: 64.21

Gene sequence:

>1506_bases
ATGGACATCTTCAACGCATTGATGGTCGGCTTTGCGGCCGCGATCACTCCAGCCAATCCTCTGTGGTGCCTCGTGGGTTG
CGCCCTGGGCACGGCCGTGGGCGTGCTGCCCGGCATTGGCCCGGCCGTGGCTGTGGCCATGCTGCTGCCCATCACCGCCA
AGGTCGACGTCACGGCCTCGATGATTTTCTTCTCGGGCATTTACTACGGTGCCATGTATGGTGGTTCGACGACCTCCATC
CTGCTGAACACACCCGGCGAAACGGCGAGCATGGTCACTGCCATGGAGGGCAACAAGATGGCCAAGAGCGGCCGTGCGGG
TGCAGCGCTGGCCACGGCGGCCATAGGCTCGTTTGTCGCCGGCACCATTGCCACCGTGATCGTCACGCTGTTCGCGCCCT
TTGTGGCCGAGTTCGCGGTCAAGCTCGGCCCGCCTGAGTATTTCCTGCTCATGCTGCTGGCCTTCACCACCGTGAGTGCG
GTGCTCGGCAAGAGCACGCTGCGCGGCATGACGGCGCTGTTCATCGGATTGGCGGCGGGCTGCGTCGGTCTCGACCAGAT
TTCAGGCCAGGGCCGTTACACCGGCGGCATTCCGGAGTTTCTCGACGGCATTGAGATCGTGCTGGTGGCGGTCGGATTGT
TCGCCGTGGCGGAAGTGCTGTACGCCGTGCTGTACGAAGGCCGGGTCGTGGAGGATCAGAACAGGCTGAGCCGTGTGCAC
ATGACGGCGCGCGACTGGAAGCGCTCTATCCCCGCCTGGCTGCGCGGAACGGCCATCGGCGCCCCGTTTGGCTGCATCCC
GGCCGGTGGGACCGAAATACCCACCTTCCTGAGCTATGCGATGGAAAAAAAGCTGGCCAAGGACCCGAAGGACAGGGCGG
AGTTCGGCAGCACCGGCGCCATTGAAGGCGTGGCCGGACCCGAGGCCGCCAACAACGCCACCGTGACTGCCGCGCTGATT
CCGCTGCTGACGCTCGGCATTCCCACCTCCAACACCACGGCCATTCTGCTGGGCGCTTTCCAGAACTACGGCATCCAGCC
CGGCCCGCAGCTGTTCACCACCTCGGCGGCGCTGGTATGGGCGCTGATCGCCTCCCTCTACATTGGCAATGTGATGCTGC
TGGTGCTGAACCTGCCGATGGTCGGGCTCTGGGTCAAGCTGCTCAAGATTCCGAAGCCGCAGCTGTATGCCGGCATCCTG
ATCTTCGCAACGGTCGGGGCCTATGGCATGCGCCAAAGCGCGTTTGACCTGTTCCTGCTGTATGGCATCGGGCTGCTGGG
TGTGGTGATGCGCCGCTTTGACTTTCCGACCGCACCGGTGGTCGTTGGCATGATTCTCGGGCCACTGGCAGAAGCGCAGT
TGCGCAACGCCATGTCCATCGGCGAGGGCAGTGCCGTGGTGTTCTTCCAGCGCCCGATGTCCATCACGCTCATCGTGATC
ATCGTGTCTGTGCTGGTGCTGCCGCGGCTGGCCAGGTACTGGGGGCCGCGCAAGCTCGCGGCATGA

Upstream 100 bases:

>100_bases
ATCGTGACCGGCCTGCTCATTTCAGCGCCGGTGTTCTGGACGTCCACGCAATTCCTGGCCATCAACCTGCCCGGCCTGAC
TTCGACGGGATGGTTCTGAC

Downstream 100 bases:

>100_bases
CTTTTTCGTTGGGAAAACCTTAAAGATCTCTGGAGGAAAGCATGCTGAAGATTCAAAGACGCACCGCCCTGGGTGGGCTG
GCCATCGCCGCAGTGGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTASMIFFSGIYYGAMYGGSTTSI
LLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSA
VLGKSTLRGMTALFIGLAAGCVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH
MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGAIEGVAGPEAANNATVTAALI
PLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL
IFATVGAYGMRQSAFDLFLLYGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI
IVSVLVLPRLARYWGPRKLAA

Sequences:

>Translated_501_residues
MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTASMIFFSGIYYGAMYGGSTTSI
LLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSA
VLGKSTLRGMTALFIGLAAGCVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH
MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGAIEGVAGPEAANNATVTAALI
PLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL
IFATVGAYGMRQSAFDLFLLYGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI
IVSVLVLPRLARYWGPRKLAA
>Mature_501_residues
MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTASMIFFSGIYYGAMYGGSTTSI
LLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSA
VLGKSTLRGMTALFIGLAAGCVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH
MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGAIEGVAGPEAANNATVTAALI
PLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL
IFATVGAYGMRQSAFDLFLLYGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI
IVSVLVLPRLARYWGPRKLAA

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 52378; Mature: 52378

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTAS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
MIFFSGIYYGAMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVA
HHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
GTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSAVLGKSTLRGMTALFIGLAAG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHH
MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGA
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC
IEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVW
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHH
ALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGILIFATVGAYGMRQSAFDLFLL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
IVSVLVLPRLARYWGPRKLAA
HHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTAS
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH
MIFFSGIYYGAMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVA
HHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
GTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSAVLGKSTLRGMTALFIGLAAG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHH
MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGA
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC
IEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVW
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHH
ALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGILIFATVGAYGMRQSAFDLFLL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH
IVSVLVLPRLARYWGPRKLAA
HHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]