Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787878

Identifier: 91787878

GI number: 91787878

Start: 2070537

End: 2071442

Strand: Direct

Name: 91787878

Synonym: Bpro_2002

Alternate gene names: NA

Gene position: 2070537-2071442 (Clockwise)

Preceding gene: 91787877

Following gene: 91787879

Centisome position: 39.82

GC content: 66.45

Gene sequence:

>906_bases
ATGACCGCCTCTTCCCTGTTTGCCAAAGTCCCGCTTGACGGCCTGAGTCCGGAGCTGCTGCGTGCCGCGCGCTGGATTGA
AGCGCATCCGCGCGAGGTGGCGCTGCATTCGATGCGCGAATGTGCGCGCCGTGCCGGGCTGGCGCCAGCGACGCTGACCC
GCCTTTCACAGGCGCTGGGGTTCAACGGTTTTGACGCGATCAAAAATCTTTGCCAGGAGTCTTTTGCGGCGCAGGCGGGT
TACGCCGGGCGGGCCGAAGTTTTGCAGGCCAGCGCGCGGCACAGCAAGGACTGGCTGGCGGTCTTGAATGAAACCCAGCA
CGCCAACACGGCGTCTATCGGCGGGCTGAACCAGCGCGGGCAGCTGGAGGCCGCGGCCGATGCAATGCTTAAAGCCCGAC
GCATCTATTTTCTGGGTCTGCGCGCCAGCCACGGCCTGGCGCTGCACCTGCACTACACCTATGGTTTGTTGGCGTCCAAC
GGGGTTCTGGTGCAGGGGCTGGGCGGCACGCTGAGCGACCAGATCGGCGAGATGGGCCGCGGTGATCTGCTGGTCGCGAT
GTCGCTGGCGCCCTACACCCGGCAGACGGTGGATGCCGTTGCGCAGGCGCTGGGGCAGGGTGTCGACCTGATGGTGCTGA
CCGACAGCGCACTGTCGCCGATTGCCCGCTCAGCAGCCCATACCTTGCTGTTCCGTGCCGACAGCCCTTCGTATTTCCAG
TCCATGGTCGGTGCGCTGGCGCTGGCCGAAGCACTGGCCGCCGCCGTGGCGGTGCGCGGCGGCCGCAAGGTGCTGGCGCG
CCTGCAGTCCCGGCAAAACCGGCTGGACAACGAGGGCGCCTACTGGGACAAGCTGGCCGACAAGCCGGTGCCCGTCCATC
CATTGAGTTTCCCGGCGAGGAAATGA

Upstream 100 bases:

>100_bases
GTCCATTCTTCGCCGCCCGGTGGCAGCGACCTCAGGCAATTGCTGATCTGGTGTTGAAACATTTGTGCTGTATATTATGA
GAAATTGATTCAAATGTTTC

Downstream 100 bases:

>100_bases
GTTTTATGGCCACAGTTCCTACCCATGTATTTCACCGGAACTTGCAGAACACGCCACCGGTGGCGGTCAGCGGGCAGGGT
GTTTACCTGACCGATGCACA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Domain-Containing Protein; Sugar Isomerase; Transcriptional Regulator Protein; Transcription Regulator Protein; RpiR-Family Transcriptional Regulator; SIS Family Regulator; Transcriptional Regulator RpiR Family Protein; Transcriptional Regulator Rpir Family; GlvR Family Transcriptional Regulator; Conserved Hypothethical Protein; RpiR Family Regulatory; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; RpiR Family Transcription Regulator Protein; Bifunctional Protein Glk; Sugar Isomerase Family Protein; Transcriptional Regulator IolR; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLCQESFAAQAG
YAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRGQLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASN
GVLVQGLGGTLSDQIGEMGRGDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ
SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPARK

Sequences:

>Translated_301_residues
MTASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLCQESFAAQAG
YAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRGQLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASN
GVLVQGLGGTLSDQIGEMGRGDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ
SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPARK
>Mature_300_residues
TASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALGFNGFDAIKNLCQESFAAQAGY
AGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRGQLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASNG
VLVQGLGGTLSDQIGEMGRGDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQS
MVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPARK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32099; Mature: 31968

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALG
CCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
FNGFDAIKNLCQESFAAQAGYAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRG
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCC
QLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGR
CHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEHHHHHHCCCEEEEECCCHHHHHHHCCCC
GDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHEEEECCCCHHHH
SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPAR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure 
TASSLFAKVPLDGLSPELLRAARWIEAHPREVALHSMRECARRAGLAPATLTRLSQALG
CCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
FNGFDAIKNLCQESFAAQAGYAGRAEVLQASARHSKDWLAVLNETQHANTASIGGLNQRG
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCC
QLEAAADAMLKARRIYFLGLRASHGLALHLHYTYGLLASNGVLVQGLGGTLSDQIGEMGR
CHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEHHHHHHCCCEEEEECCCHHHHHHHCCCC
GDLLVAMSLAPYTRQTVDAVAQALGQGVDLMVLTDSALSPIARSAAHTLLFRADSPSYFQ
CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHEEEECCCCHHHH
SMVGALALAEALAAAVAVRGGRKVLARLQSRQNRLDNEGAYWDKLADKPVPVHPLSFPAR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA