| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yjgR [H]
Identifier: 91787842
GI number: 91787842
Start: 2033566
End: 2035083
Strand: Reverse
Name: yjgR [H]
Synonym: Bpro_1966
Alternate gene names: 91787842
Gene position: 2035083-2033566 (Counterclockwise)
Preceding gene: 91787854
Following gene: 91787841
Centisome position: 39.13
GC content: 64.62
Gene sequence:
>1518_bases ATGGTCGAACCCTTATTGATTGCCAGAAACGCGTCTGTCCATTGTGAGCTTATTCCGGGGCTTGCCAACCGCCACGGCCT GATTACCGGCGCCACCGGGACGGGCAAGACCGTCACGCTGCAGACGCTGGCTGAAAATTTCTCGAAAATCGGCGTGCCCG TCTTCATGGCGGACGTCAAGGGTGACCTGACCGGCATCAGCCAGGCCGGCAGCATTGGTGAAAAAATGGCCGGCATCCTC AAGGAGCGCGGCATTGAGACGCCAGAACCCCTGGCCTGCCCCGCCACGCTGTGGGACGTCTTCGGCGAGCAGGGGCACCC CGTTCGCGCCACCGTGTCCGACATGGGCCCGCTGCTGCTGGGCCGCATGCTCAACCTCAACGAGACCCAGGCCGGCGTGC TCAACCTGGTGTTCAAGATCGCCGACGACAACGGCCTGCTGCTGCTGGACCTGAAGGACCTGCGGGCCATGCTGCAGTAT GTGGGCGACAACGCCGGCCAGTTCACCACGCAATACGGCAACGTCAGCGCCGCCAGCGTGGGCGCCATTCAGCGTGGCCT GATGCAGATCGAAAGCCAGGGCGCAGACAAGTTCTTTGGCGAGCCCATGCTCAACATCAGCGACTTCATGCAGACCGACG GCGCCGGGCACGGGATGATCAACATCCTGGCGGCCGACCGGCTGATGAATTCGCCGCGCCTGTACGCCACCTTCCTGCTG TGGATGCTGTCCGAGCTGTTCGAGCAACTGCCCGAAATCGGCGACCCTGAAAAACCCAAGCTGGTGTTCTTCTTTGACGA AGCGCATTTGCTGTTCAACGAAGCCCCCAAGGTGCTGGTTGAGCGCATCGAGCTGGTGGTGCGCCTGGTGCGCTCCAAGG GCGTGGGCGTGTATTTTGTGACGCAAAACCCGCTGGACATTCCCGACTCCGTCCTGGCCCAGCTGGGCAACCGGGTGCAG CACGCCCTGCGCGCCTTCACGCCTCGCGACCAGAAAGCCGTCAAGGCGACCGCCCAGACCATGCGGCAAAAGCCCGGGCT GGACATCGAGACCGCCATTACCGAGCTGGCCGTGGGCGAGGCGCTGGTGAGCTTTCTCGACAGCAAGGGCCGCCCCAGCA TCACCGAGCGCGTCTATGTGCTGCCTCCGGGTAGCCAGATCGGCCCGATCACCCCGCAACAACGCCAGTCGCTGCTGCAA AATTCGCTGGTCGCGGGCGTCTACGAAAAAGAAGTCGACCGCGAGTCCGCTTACGAAAAAATCAAGGACCGCGCCGATGC GGCGGCCGAAGCGGCTGCAAAAGCTCCCGGTGGCGGCGCGGCGGGCGAGTCTGCCTCGGGCGGCATTCTGGGTGGCCTGA ACGACGTACTCTTTGGCAGCACCGGGCCGCGCGGCGGCCGGCATGAAGGCCTGGCGCAGAGCATGGCCAAGTCCGCCGTC CGCACCATGGGCTCCGCCGTGGGGCGAGAGATCATCCGCGGCGTGCTGGGCGGTATCTTTGGCGGCAAGCGGCGCTGA
Upstream 100 bases:
>100_bases TCCATCATTTTACTTTTAGGAAGCGCTGCATAGCCCCCGCGAGGCCCTGCAGCCCGGATCGGGATGAGCTGCAAGCTTCC TTACACCCCAGGACACTGCC
Downstream 100 bases:
>100_bases AACAGCATGGCCGGCAATAGCGCGGCTCCCTTTCAAGTTCATCAACCAGCGACACACTGCCCCGCATGCGGCATGCGGCA TGCGGCATGCGGCATGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVKGDLTGISQAGSIGEKMAGIL KERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQY VGDNAGQFTTQYGNVSAASVGAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFVTQNPLDIPDSVLAQLGNRVQ HALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGEALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQ NSLVAGVYEKEVDRESAYEKIKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV RTMGSAVGREIIRGVLGGIFGGKRR
Sequences:
>Translated_505_residues MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVKGDLTGISQAGSIGEKMAGIL KERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQY VGDNAGQFTTQYGNVSAASVGAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFVTQNPLDIPDSVLAQLGNRVQ HALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGEALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQ NSLVAGVYEKEVDRESAYEKIKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV RTMGSAVGREIIRGVLGGIFGGKRR >Mature_505_residues MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVKGDLTGISQAGSIGEKMAGIL KERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQY VGDNAGQFTTQYGNVSAASVGAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFVTQNPLDIPDSVLAQLGNRVQ HALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGEALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQ NSLVAGVYEKEVDRESAYEKIKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV RTMGSAVGREIIRGVLGGIFGGKRR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=505, Percent_Identity=64.3564356435644, Blast_Score=648, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 53877; Mature: 53877
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVK CCCCEEEECCCCEEEEECCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECC GDLTGISQAGSIGEKMAGILKERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLL CCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHH GRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQYVGDNAGQFTTQYGNVSAASV HHHCCCCCHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHH GAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL HHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFV HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE TQNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGE ECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQNSLVAGVYEKEVDRESAYEK HHHHHHCCCCCCCHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH RTMGSAVGREIIRGVLGGIFGGKRR HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVK CCCCEEEECCCCEEEEECCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECC GDLTGISQAGSIGEKMAGILKERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLL CCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHH GRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQYVGDNAGQFTTQYGNVSAASV HHHCCCCCHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHH GAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL HHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFV HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE TQNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGE ECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQNSLVAGVYEKEVDRESAYEK HHHHHHCCCCCCCHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH RTMGSAVGREIIRGVLGGIFGGKRR HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]