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The map label for this gene is ycfJ [H]

Identifier: 91787831

GI number: 91787831

Start: 2021618

End: 2022238

Strand: Direct

Name: ycfJ [H]

Synonym: Bpro_1954

Alternate gene names: 91787831

Gene position: 2021618-2022238 (Clockwise)

Preceding gene: 91787829

Following gene: 91787832

Centisome position: 38.88

GC content: 69.08

Gene sequence:

>621_bases
ATGAAACGTTCTGCCATTCTTTGCCTGACCACGCTGCTGGCAGCGGGCGCCCAGGCCCAGACCTTCAACGACACGGCCCG
CGTGCGCAATGTCAACCCACAGTACGAGAACGTCTCCGTGCCGCGCAACGAGTGCACCAGCCAGTGGGTGACCGAGCAGC
AACCCGTGGCGGCTTCGCGCAATTACGGCGGGCTGGCGGTTGGCGGTGTGGCCGGCGCCGTGCTGGGCAACCAGGTCGGC
AAGGGGCACGGCCGCGAAGCCGCCACCGCGCTCGGTGCCGTGGTCGGCGCGCTGGCCGGCGAGCACTTTGCCAACCAGAA
CGGCTGGGGTGGTGGCTACCAGCAGGCAGCGCAGCCGCAGCAGCGCCAGGTGCAAACCTGCAACACCGTCAACGACGTGC
AGTCCCGCCTGACGGGCTACCAGGTCGAGTACGAGTACCGCGGTCAGGTCTACAGCACGGTGACCCGCGAGAACCCGGGC
CGCACCTTGCCCGTGCGCGTCTCGGTGGCCCCGGTGGAGCCGGTGGCGTCGGTGGGGCGCGAGCTCCAGGGCGCACGCGA
ATACCAGGGCCGGCGCGATGACCGTGGCGGTCGCGAGTACTATGGTGCTTACAACCGATGA

Upstream 100 bases:

>100_bases
GGGGTAGGTGTTGCGAAGAACCTTTTATCGATTTCGTTCAGCTTGCGTTCACCTGCCTCTTTGTAAGCTCTGCTCTACAT
ATCAACCAAGGAGCCTCTTC

Downstream 100 bases:

>100_bases
ACGCACGATGAACGCATTTGCCAAACTGCTCTGCGCCACCTTGCTGGTGGCGTCCAGCCTGGCCTGGGCCGACCTGAGCC
GCGACGACGCGGCCGCGGCG

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKRSAILCLTTLLAAGAQAQTFNDTARVRNVNPQYENVSVPRNECTSQWVTEQQPVAASRNYGGLAVGGVAGAVLGNQVG
KGHGREAATALGAVVGALAGEHFANQNGWGGGYQQAAQPQQRQVQTCNTVNDVQSRLTGYQVEYEYRGQVYSTVTRENPG
RTLPVRVSVAPVEPVASVGRELQGAREYQGRRDDRGGREYYGAYNR

Sequences:

>Translated_206_residues
MKRSAILCLTTLLAAGAQAQTFNDTARVRNVNPQYENVSVPRNECTSQWVTEQQPVAASRNYGGLAVGGVAGAVLGNQVG
KGHGREAATALGAVVGALAGEHFANQNGWGGGYQQAAQPQQRQVQTCNTVNDVQSRLTGYQVEYEYRGQVYSTVTRENPG
RTLPVRVSVAPVEPVASVGRELQGAREYQGRRDDRGGREYYGAYNR
>Mature_206_residues
MKRSAILCLTTLLAAGAQAQTFNDTARVRNVNPQYENVSVPRNECTSQWVTEQQPVAASRNYGGLAVGGVAGAVLGNQVG
KGHGREAATALGAVVGALAGEHFANQNGWGGGYQQAAQPQQRQVQTCNTVNDVQSRLTGYQVEYEYRGQVYSTVTRENPG
RTLPVRVSVAPVEPVASVGRELQGAREYQGRRDDRGGREYYGAYNR

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Rickettsia 17 kDa surface antigen [H]

Homologues:

Organism=Escherichia coli, GI1787353, Length=140, Percent_Identity=32.8571428571429, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 22189; Mature: 22189

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSAILCLTTLLAAGAQAQTFNDTARVRNVNPQYENVSVPRNECTSQWVTEQQPVAASR
CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
NYGGLAVGGVAGAVLGNQVGKGHGREAATALGAVVGALAGEHFANQNGWGGGYQQAAQPQ
CCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHH
QRQVQTCNTVNDVQSRLTGYQVEYEYRGQVYSTVTRENPGRTLPVRVSVAPVEPVASVGR
HHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEHECCCCCCCEEEEEEEECCCCHHHHHHH
ELQGAREYQGRRDDRGGREYYGAYNR
HHHHHHHHCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MKRSAILCLTTLLAAGAQAQTFNDTARVRNVNPQYENVSVPRNECTSQWVTEQQPVAASR
CCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
NYGGLAVGGVAGAVLGNQVGKGHGREAATALGAVVGALAGEHFANQNGWGGGYQQAAQPQ
CCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHH
QRQVQTCNTVNDVQSRLTGYQVEYEYRGQVYSTVTRENPGRTLPVRVSVAPVEPVASVGR
HHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEHECCCCCCCEEEEEEEECCCCHHHHHHH
ELQGAREYQGRRDDRGGREYYGAYNR
HHHHHHHHCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]