| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is braF [H]
Identifier: 91787730
GI number: 91787730
Start: 1912923
End: 1913681
Strand: Direct
Name: braF [H]
Synonym: Bpro_1851
Alternate gene names: 91787730
Gene position: 1912923-1913681 (Clockwise)
Preceding gene: 91787729
Following gene: 91787731
Centisome position: 36.79
GC content: 61.13
Gene sequence:
>759_bases ATGATGAGCCCTCTGCTGAAAGTCACCGACCTCAGGAAATCCTACGGTGCCATCCAGGCGGTCGGCGGTGTGTCATTTGA AGTCATGCCGGGCGAGATCTTTGGCGTGATCGGGCCCAACGGCTCGGGCAAGACCACCATGTTCAACAGCGTGCTGGGCC AGATCAGCCCGGACACCGGCGCCATCGAGCTCAACGGCAAAAACATCACGGGTTTGTCACCGCTGGAGTTGAGCCGGCGC GGCGTGGGCCGCACCTTCCAGACCCTGCAGGTGTTTGGCAAGATGACAGTGCGCGACAACCTGATCGTGGCCGCGCAGGA GCACAAAGGCAGCATGCTCAGCCGCATGTTTGCCCCCGGCGACTCGGGGCTGGGCGCGAAGGCCGATGCGCTGATCGACC AGTTCCGCATCCGCCATGTCGCCGACAAGCCGGCCGGCACGCTGAGCTACGGCCAGCAAAAGCTGGTGGACATTGCCATG GCCTTCATGGCCGAGCCCGACCTCGTGCTGCTCGACGAGCCATGTGCCGGTGTCAACCCCAGCCTGGTGGGCGGCATCTC GACCCTCCTCAAGGAATTGAACCAGAACCCGAAGTTCGGGCGCAAGGGATCGTTTGTGGTGATTGAGCACAACATGGACT TTGTGATGGATTTGTGCCACCGCATCATGGTGATGGTGGAGGGGCGGGTGCTGGCGATTGGCACACCGGCTGAAATTCGG GGCAACAAAGAGGTGCTTGATGCTTATTTAGGGAATTAG
Upstream 100 bases:
>100_bases TTCCGGACCGCATCCGGGACCGGCGCGCCGCGCGTGATGCCTCGGCAGCCCGCAAAATTGCAGCGGGCATGGCGGCCACC AAGCGGGTGGGAGCAGCATC
Downstream 100 bases:
>100_bases CCCCTGTCTCGGCTCACTGCGTGTAGCCGGAATCCCCCTCAGGGGGACAACCGCTGCGGCCCGGCGAAGCCGGTTCCGCG CCGTTGCTGATAAAGAAATT
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MMSPLLKVTDLRKSYGAIQAVGGVSFEVMPGEIFGVIGPNGSGKTTMFNSVLGQISPDTGAIELNGKNITGLSPLELSRR GVGRTFQTLQVFGKMTVRDNLIVAAQEHKGSMLSRMFAPGDSGLGAKADALIDQFRIRHVADKPAGTLSYGQQKLVDIAM AFMAEPDLVLLDEPCAGVNPSLVGGISTLLKELNQNPKFGRKGSFVVIEHNMDFVMDLCHRIMVMVEGRVLAIGTPAEIR GNKEVLDAYLGN
Sequences:
>Translated_252_residues MMSPLLKVTDLRKSYGAIQAVGGVSFEVMPGEIFGVIGPNGSGKTTMFNSVLGQISPDTGAIELNGKNITGLSPLELSRR GVGRTFQTLQVFGKMTVRDNLIVAAQEHKGSMLSRMFAPGDSGLGAKADALIDQFRIRHVADKPAGTLSYGQQKLVDIAM AFMAEPDLVLLDEPCAGVNPSLVGGISTLLKELNQNPKFGRKGSFVVIEHNMDFVMDLCHRIMVMVEGRVLAIGTPAEIR GNKEVLDAYLGN >Mature_252_residues MMSPLLKVTDLRKSYGAIQAVGGVSFEVMPGEIFGVIGPNGSGKTTMFNSVLGQISPDTGAIELNGKNITGLSPLELSRR GVGRTFQTLQVFGKMTVRDNLIVAAQEHKGSMLSRMFAPGDSGLGAKADALIDQFRIRHVADKPAGTLSYGQQKLVDIAM AFMAEPDLVLLDEPCAGVNPSLVGGISTLLKELNQNPKFGRKGSFVVIEHNMDFVMDLCHRIMVMVEGRVLAIGTPAEIR GNKEVLDAYLGN
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=241, Percent_Identity=30.2904564315353, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI47078218, Length=241, Percent_Identity=30.2904564315353, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI27881501, Length=243, Percent_Identity=27.5720164609054, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI30795238, Length=243, Percent_Identity=27.5720164609054, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI150417984, Length=243, Percent_Identity=27.9835390946502, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI31657092, Length=233, Percent_Identity=29.1845493562232, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI27436953, Length=236, Percent_Identity=25, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI27477115, Length=195, Percent_Identity=27.1794871794872, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI116734710, Length=245, Percent_Identity=25.7142857142857, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI105990541, Length=243, Percent_Identity=28.8065843621399, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI153792144, Length=191, Percent_Identity=27.7486910994764, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI6005701, Length=250, Percent_Identity=26.8, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI11967969, Length=247, Percent_Identity=27.1255060728745, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27262624, Length=236, Percent_Identity=25.8474576271186, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI27262626, Length=236, Percent_Identity=25.8474576271186, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI21536376, Length=239, Percent_Identity=28.4518828451883, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI157502203, Length=218, Percent_Identity=25.2293577981651, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI157502201, Length=218, Percent_Identity=25.2293577981651, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1789864, Length=257, Percent_Identity=36.5758754863813, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1789593, Length=247, Percent_Identity=33.6032388663968, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=28.2051282051282, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI48994943, Length=250, Percent_Identity=28.8, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082268, Length=252, Percent_Identity=29.3650793650794, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1790190, Length=231, Percent_Identity=26.4069264069264, Blast_Score=103, Evalue=8e-24, Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=30.0847457627119, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1788472, Length=228, Percent_Identity=28.0701754385965, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790544, Length=247, Percent_Identity=27.9352226720648, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=27.1966527196653, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87081782, Length=238, Percent_Identity=27.3109243697479, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1788210, Length=250, Percent_Identity=25.6, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787370, Length=238, Percent_Identity=29.4117647058824, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=225, Percent_Identity=27.1111111111111, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787712, Length=238, Percent_Identity=28.1512605042017, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786398, Length=242, Percent_Identity=28.9256198347107, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786803, Length=225, Percent_Identity=28, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI48994997, Length=243, Percent_Identity=28.8065843621399, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1790739, Length=234, Percent_Identity=29.4871794871795, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786253, Length=250, Percent_Identity=27.2, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=22.7272727272727, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI48995001, Length=235, Percent_Identity=24.6808510638298, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=24.7899159663866, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=26.5822784810127, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=23.5042735042735, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789586, Length=242, Percent_Identity=27.6859504132231, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788644, Length=249, Percent_Identity=29.718875502008, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1789873, Length=234, Percent_Identity=29.0598290598291, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789032, Length=232, Percent_Identity=28.8793103448276, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1788165, Length=248, Percent_Identity=25.4032258064516, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI145693107, Length=223, Percent_Identity=29.5964125560538, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789991, Length=238, Percent_Identity=26.890756302521, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=25.1063829787234, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=29.7413793103448, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=22.9787234042553, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI87082267, Length=235, Percent_Identity=24.6808510638298, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788897, Length=231, Percent_Identity=25.974025974026, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790162, Length=214, Percent_Identity=28.9719626168224, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI48994883, Length=256, Percent_Identity=25.78125, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789962, Length=266, Percent_Identity=24.812030075188, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787105, Length=222, Percent_Identity=25.6756756756757, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=22.7467811158798, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87081834, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787500, Length=230, Percent_Identity=24.3478260869565, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788506, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789891, Length=218, Percent_Identity=32.1100917431193, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1786563, Length=229, Percent_Identity=27.5109170305677, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787112, Length=240, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789963, Length=248, Percent_Identity=28.6290322580645, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786703, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI2367384, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787759, Length=255, Percent_Identity=28.6274509803922, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786345, Length=209, Percent_Identity=26.7942583732057, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1786698, Length=179, Percent_Identity=28.4916201117318, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786981, Length=235, Percent_Identity=28.5106382978723, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115533608, Length=233, Percent_Identity=32.1888412017167, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71983510, Length=236, Percent_Identity=29.6610169491525, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71983523, Length=236, Percent_Identity=29.6610169491525, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71983516, Length=236, Percent_Identity=29.6610169491525, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17565586, Length=253, Percent_Identity=26.8774703557312, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17510237, Length=238, Percent_Identity=25.2100840336134, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193208177, Length=220, Percent_Identity=26.8181818181818, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17551702, Length=222, Percent_Identity=27.4774774774775, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17551700, Length=222, Percent_Identity=27.4774774774775, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666092, Length=242, Percent_Identity=30.5785123966942, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI28574150, Length=238, Percent_Identity=29.8319327731092, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI116007328, Length=238, Percent_Identity=29.8319327731092, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI221512771, Length=235, Percent_Identity=28.0851063829787, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI221500365, Length=229, Percent_Identity=27.0742358078603, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI116007184, Length=229, Percent_Identity=27.0742358078603, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573573, Length=241, Percent_Identity=27.8008298755187, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28573571, Length=241, Percent_Identity=27.8008298755187, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24648314, Length=230, Percent_Identity=26.5217391304348, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24643674, Length=230, Percent_Identity=26.5217391304348, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28571209, Length=224, Percent_Identity=23.6607142857143, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI85725262, Length=233, Percent_Identity=27.4678111587983, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI17136592, Length=235, Percent_Identity=27.6595744680851, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI62484234, Length=221, Percent_Identity=23.9819004524887, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24582014, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24582012, Length=237, Percent_Identity=25.7383966244726, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26977; Mature: 26977
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSPLLKVTDLRKSYGAIQAVGGVSFEVMPGEIFGVIGPNGSGKTTMFNSVLGQISPDTG CCCCHHHHHHHHHHHCCEEECCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCC AIELNGKNITGLSPLELSRRGVGRTFQTLQVFGKMTVRDNLIVAAQEHKGSMLSRMFAPG EEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHCCC DSGLGAKADALIDQFRIRHVADKPAGTLSYGQQKLVDIAMAFMAEPDLVLLDEPCAGVNP CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC SLVGGISTLLKELNQNPKFGRKGSFVVIEHNMDFVMDLCHRIMVMVEGRVLAIGTPAEIR HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCHHHC GNKEVLDAYLGN CCHHHHHHHHCC >Mature Secondary Structure MMSPLLKVTDLRKSYGAIQAVGGVSFEVMPGEIFGVIGPNGSGKTTMFNSVLGQISPDTG CCCCHHHHHHHHHHHCCEEECCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCCCC AIELNGKNITGLSPLELSRRGVGRTFQTLQVFGKMTVRDNLIVAAQEHKGSMLSRMFAPG EEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHEECCCEEEEECCCCCHHHHHHHCCC DSGLGAKADALIDQFRIRHVADKPAGTLSYGQQKLVDIAMAFMAEPDLVLLDEPCAGVNP CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC SLVGGISTLLKELNQNPKFGRKGSFVVIEHNMDFVMDLCHRIMVMVEGRVLAIGTPAEIR HHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCHHHC GNKEVLDAYLGN CCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]