The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is yncE [C]

Identifier: 91787683

GI number: 91787683

Start: 1865031

End: 1866050

Strand: Direct

Name: yncE [C]

Synonym: Bpro_1802

Alternate gene names: 91787683

Gene position: 1865031-1866050 (Clockwise)

Preceding gene: 91787681

Following gene: 91787684

Centisome position: 35.86

GC content: 61.27

Gene sequence:

>1020_bases
GTGAACGTTCCCGTCCGTAATCTGGCCGCCTGGTTGTGTGCAGTTGCTGGCTTGCTGCCTGCGGTTTGCCCGTCGGCGCT
GGCCCAAACCGCCCCGCTTGCTTCGTTTTCCGCAGCGTCGCCCGTGTTTGTCCTCAATTCGCTCGATGACACGGTAAGTA
TTGTCAACCCCGCGACCTGGACCGAGACCCGGCGCATTGCCACGGGCAAGCAGCCGCATCACCTGTACCTCACGCCTGAT
GAAAAATCGGTGATTGTGGCCAATGCCTTGTCCGACACGCTGACCTTTATCGACCCGAAAACCGCCGAGGTGCAGCGCAC
CGTGCGCGGCATTCTGGACCCGTACCAGTTGCGCTTTTCACCTGACATGAAGTGGTTTGTGACCGCCGCCAACCGCCTGA
ACCATATCGACATTTACCGCTGGGACGGCAAGGACATCGTTCTGGCCAAGCGTGTGGCCACTGGCAAGACGCCCAGCCAT
TTGTGGATAGACAGCAAAAGCAGCACGATTTATTCCACCATGCAGGACAGCGATGAGCTGATTGCGGTGGACCTGGCAAG
CCAGGCCATCAAGTGGCGCACCAAAACCGGCTCCATCCCGGCCGACGTGTACGGAACGGCCGACGACAAATTCATGCTGG
TCGGTCTCACAGGCAGCGACGCGGTCGAGGTGTATGACGTGAGTGGCAAGGAGCCCAAGCGCAGCAAGGTCATCAAGACC
GGTGCCGGTGCCCACGCCTTCCGCGCCCTGGGCGACCGGCGGCATGTGCTGGTCAGCAACCGCGTGGCCAACAGCATCAG
CAAAATCGATTTGCAGACTCTGGAGGTGGTGGACAGTTACCCCGCGCCGGGCGGGCCGGACTGCATCGACGTGAGCCGCG
ACGGCAAGCAGATCCTGGTGACTTCGCGCTGGGCCCGCAAGCTCACCGTCATTGACATCGCCAGCCACAAGGTGGTACGC
CAGATCAATGTTGGAAAGAGTCCCCACGGTGTCTGGACCCTTGATCACGCGCCGCGGTAG

Upstream 100 bases:

>100_bases
CTGCGGGCTGCAATGGATTCCGGTCCTGAGGCACCGGCTACCGGCAGTCCGGGCATGCCCGCCCGGTACACTAGACGGTT
GACCCTGGAAAGATATCTCT

Downstream 100 bases:

>100_bases
TGGGCCCCCACGGTCGCTCACTGCGTGTAGCTCCCGAGGCCTTGCAGGCCGCGGCTCGCGAGACGCTTCGCCTCTGTCGC
CGGTCCAAAGCTGCTCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Fold Protein; Signal Peptide; Cytochrome D1 Heme Region; Signal Peptide Protein; Outer Membrane Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Surface Antigen-Like Protein; Cytochrome D1 Heme Subunit; Cell Surface Protein; Triple Helix Repeat-Containing Collagen; Yvtn Beta-Propeller Repeat Family Protein; Surface Layer Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Exported Protein

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNVPVRNLAAWLCAVAGLLPAVCPSALAQTAPLASFSAASPVFVLNSLDDTVSIVNPATWTETRRIATGKQPHHLYLTPD
EKSVIVANALSDTLTFIDPKTAEVQRTVRGILDPYQLRFSPDMKWFVTAANRLNHIDIYRWDGKDIVLAKRVATGKTPSH
LWIDSKSSTIYSTMQDSDELIAVDLASQAIKWRTKTGSIPADVYGTADDKFMLVGLTGSDAVEVYDVSGKEPKRSKVIKT
GAGAHAFRALGDRRHVLVSNRVANSISKIDLQTLEVVDSYPAPGGPDCIDVSRDGKQILVTSRWARKLTVIDIASHKVVR
QINVGKSPHGVWTLDHAPR

Sequences:

>Translated_339_residues
MNVPVRNLAAWLCAVAGLLPAVCPSALAQTAPLASFSAASPVFVLNSLDDTVSIVNPATWTETRRIATGKQPHHLYLTPD
EKSVIVANALSDTLTFIDPKTAEVQRTVRGILDPYQLRFSPDMKWFVTAANRLNHIDIYRWDGKDIVLAKRVATGKTPSH
LWIDSKSSTIYSTMQDSDELIAVDLASQAIKWRTKTGSIPADVYGTADDKFMLVGLTGSDAVEVYDVSGKEPKRSKVIKT
GAGAHAFRALGDRRHVLVSNRVANSISKIDLQTLEVVDSYPAPGGPDCIDVSRDGKQILVTSRWARKLTVIDIASHKVVR
QINVGKSPHGVWTLDHAPR
>Mature_339_residues
MNVPVRNLAAWLCAVAGLLPAVCPSALAQTAPLASFSAASPVFVLNSLDDTVSIVNPATWTETRRIATGKQPHHLYLTPD
EKSVIVANALSDTLTFIDPKTAEVQRTVRGILDPYQLRFSPDMKWFVTAANRLNHIDIYRWDGKDIVLAKRVATGKTPSH
LWIDSKSSTIYSTMQDSDELIAVDLASQAIKWRTKTGSIPADVYGTADDKFMLVGLTGSDAVEVYDVSGKEPKRSKVIKT
GAGAHAFRALGDRRHVLVSNRVANSISKIDLQTLEVVDSYPAPGGPDCIDVSRDGKQILVTSRWARKLTVIDIASHKVVR
QINVGKSPHGVWTLDHAPR

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36983; Mature: 36983

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVPVRNLAAWLCAVAGLLPAVCPSALAQTAPLASFSAASPVFVLNSLDDTVSIVNPATW
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCC
TETRRIATGKQPHHLYLTPDEKSVIVANALSDTLTFIDPKTAEVQRTVRGILDPYQLRFS
CHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCCCCEEEEEC
PDMKWFVTAANRLNHIDIYRWDGKDIVLAKRVATGKTPSHLWIDSKSSTIYSTMQDSDEL
CCCEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCE
IAVDLASQAIKWRTKTGSIPADVYGTADDKFMLVGLTGSDAVEVYDVSGKEPKRSKVIKT
EEEEEHHHHHEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCHHHEEEC
GAGAHAFRALGDRRHVLVSNRVANSISKIDLQTLEVVDSYPAPGGPDCIDVSRDGKQILV
CCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE
TSRWARKLTVIDIASHKVVRQINVGKSPHGVWTLDHAPR
EECCCCEEEEEEECCCCEEHEECCCCCCCCEEEECCCCC
>Mature Secondary Structure
MNVPVRNLAAWLCAVAGLLPAVCPSALAQTAPLASFSAASPVFVLNSLDDTVSIVNPATW
CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCC
TETRRIATGKQPHHLYLTPDEKSVIVANALSDTLTFIDPKTAEVQRTVRGILDPYQLRFS
CHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHCCCCEEEEEC
PDMKWFVTAANRLNHIDIYRWDGKDIVLAKRVATGKTPSHLWIDSKSSTIYSTMQDSDEL
CCCEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCE
IAVDLASQAIKWRTKTGSIPADVYGTADDKFMLVGLTGSDAVEVYDVSGKEPKRSKVIKT
EEEEEHHHHHEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCHHHEEEC
GAGAHAFRALGDRRHVLVSNRVANSISKIDLQTLEVVDSYPAPGGPDCIDVSRDGKQILV
CCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEE
TSRWARKLTVIDIASHKVVRQINVGKSPHGVWTLDHAPR
EECCCCEEEEEEECCCCEEHEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA