| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787642
Identifier: 91787642
GI number: 91787642
Start: 1821541
End: 1822407
Strand: Direct
Name: 91787642
Synonym: Bpro_1760
Alternate gene names: NA
Gene position: 1821541-1822407 (Clockwise)
Preceding gene: 91787641
Following gene: 91787643
Centisome position: 35.03
GC content: 61.94
Gene sequence:
>867_bases ATGAGTGGTTTGAGCATGGCGACGCGGGCTGTCAGGTCCACCAGAATGTTGAAGGCTGTGGTCGGCCTTGTCTGGGTTCT GGCGGCTGGCGCTTCAATGGGGCAGACGCCCTCCATCGTGATGGCGTCCACCACTTCCACCGAGCAGTCAGGACTGTTCG TCCACCTGATGCCCGCGTTCAAAAAGGCCACGGGCATGGATGTCAAGGTGGTGGCGGTCGGTACCGGCCAGGCCATCGAC ATGGGCCGCCGCGGTGATGCCGATGTGCTGTTTGTGCATGACCAGGTGGCCGAAGAAAAAGTGGTGGCCGAAGGCTTTGC CATCCAGCGCTTCGCGGTGATGTACAACGACTTCGTCCTGGTCGGTCCGGCGTCCGACCCGGCTGGCGTCAAGGGCAGGG ACATTGCCCTGGCCCTGAAAAAAATCCAGGCAGCCAACGCCAACTTCGTCTCGCGCGGCGACAAGAGCGGCACCCATGCG GCCGAACTGCGCTACTGGAAGACCGCTGGTATCGAGACCCCGTCCGGAGCACCGGGCTTCGCCAACTACAAGGCCTGTGG CTGTGGCATGGGGCCAGCCCTCAATATTGCGGCCAATACCCCGGGTGGCGGCGCCTATGTGCTGGCCGATCGCGGCACCT GGCTGTCCTTCAAGAACCGGGCCGACCTTGCCGTGCTGGTCGAGGGCGACACACGCCTTTTCAACCAGTATGGCGTGATG GTGGTCAACCCGGCCAAACACCCGCACACCAAGGTGGCGCAAGCGCAGAAGTTTGTGGACTGGATTGTTTCGCCTGCGGG GCAAGCGGTCATTGCCAGCTACAAAATCAATGGCGAGCAGCTGTTTTTTCCCAACGCCGGGAAATAA
Upstream 100 bases:
>100_bases ACCTGGAGCACGGGCGCCTGGTGGCGGATCTGCCGACGCCTGATTTTTTCAAGGGCCCCCTTCCTGCGGCGGCTGAGCAT TTTTTAAAGGGAGAACTTGC
Downstream 100 bases:
>100_bases CGCCGAGGGGCGGACTGCCAGTCCCTGAAGGCCGTTTCCGTAGGCGGCGAGTGGGTGGCTCGTGCCCTGCGGGGGCTCTC TCCTGATTTGATGAACGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSGLSMATRAVRSTRMLKAVVGLVWVLAAGASMGQTPSIVMASTTSTEQSGLFVHLMPAFKKATGMDVKVVAVGTGQAID MGRRGDADVLFVHDQVAEEKVVAEGFAIQRFAVMYNDFVLVGPASDPAGVKGRDIALALKKIQAANANFVSRGDKSGTHA AELRYWKTAGIETPSGAPGFANYKACGCGMGPALNIAANTPGGGAYVLADRGTWLSFKNRADLAVLVEGDTRLFNQYGVM VVNPAKHPHTKVAQAQKFVDWIVSPAGQAVIASYKINGEQLFFPNAGK
Sequences:
>Translated_288_residues MSGLSMATRAVRSTRMLKAVVGLVWVLAAGASMGQTPSIVMASTTSTEQSGLFVHLMPAFKKATGMDVKVVAVGTGQAID MGRRGDADVLFVHDQVAEEKVVAEGFAIQRFAVMYNDFVLVGPASDPAGVKGRDIALALKKIQAANANFVSRGDKSGTHA AELRYWKTAGIETPSGAPGFANYKACGCGMGPALNIAANTPGGGAYVLADRGTWLSFKNRADLAVLVEGDTRLFNQYGVM VVNPAKHPHTKVAQAQKFVDWIVSPAGQAVIASYKINGEQLFFPNAGK >Mature_287_residues SGLSMATRAVRSTRMLKAVVGLVWVLAAGASMGQTPSIVMASTTSTEQSGLFVHLMPAFKKATGMDVKVVAVGTGQAIDM GRRGDADVLFVHDQVAEEKVVAEGFAIQRFAVMYNDFVLVGPASDPAGVKGRDIALALKKIQAANANFVSRGDKSGTHAA ELRYWKTAGIETPSGAPGFANYKACGCGMGPALNIAANTPGGGAYVLADRGTWLSFKNRADLAVLVEGDTRLFNQYGVMV VNPAKHPHTKVAQAQKFVDWIVSPAGQAVIASYKINGEQLFFPNAGK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30292; Mature: 30161
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLSMATRAVRSTRMLKAVVGLVWVLAAGASMGQTPSIVMASTTSTEQSGLFVHLMPAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECHH KKATGMDVKVVAVGTGQAIDMGRRGDADVLFVHDQVAEEKVVAEGFAIQRFAVMYNDFVL HHCCCCCEEEEEEECCCEEECCCCCCCCEEEEECHHHHHHHHHCCHHHHHEEEEECCEEE VGPASDPAGVKGRDIALALKKIQAANANFVSRGDKSGTHAAELRYWKTAGIETPSGAPGF EECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHEEEEEECCCCCCCCCCCC ANYKACGCGMGPALNIAANTPGGGAYVLADRGTWLSFKNRADLAVLVEGDTRLFNQYGVM CCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEECCCCCEEEEEECCCEEEHHCCEE VVNPAKHPHTKVAQAQKFVDWIVSPAGQAVIASYKINGEQLFFPNAGK EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCCC >Mature Secondary Structure SGLSMATRAVRSTRMLKAVVGLVWVLAAGASMGQTPSIVMASTTSTEQSGLFVHLMPAF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECHH KKATGMDVKVVAVGTGQAIDMGRRGDADVLFVHDQVAEEKVVAEGFAIQRFAVMYNDFVL HHCCCCCEEEEEEECCCEEECCCCCCCCEEEEECHHHHHHHHHCCHHHHHEEEEECCEEE VGPASDPAGVKGRDIALALKKIQAANANFVSRGDKSGTHAAELRYWKTAGIETPSGAPGF EECCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHEEEEEECCCCCCCCCCCC ANYKACGCGMGPALNIAANTPGGGAYVLADRGTWLSFKNRADLAVLVEGDTRLFNQYGVM CCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEECCCCCEEEEEECCCEEEHHCCEE VVNPAKHPHTKVAQAQKFVDWIVSPAGQAVIASYKINGEQLFFPNAGK EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA