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The map label for this gene is yiaN [C]

Identifier: 91787634

GI number: 91787634

Start: 1813045

End: 1814574

Strand: Reverse

Name: yiaN [C]

Synonym: Bpro_1752

Alternate gene names: 91787634

Gene position: 1814574-1813045 (Counterclockwise)

Preceding gene: 91787635

Following gene: 91787633

Centisome position: 34.89

GC content: 60.26

Gene sequence:

>1530_bases
ATGCAGATGGAAAATTTTGCCCCGATCATGTTCGCGGGCCTCGTGCTGATCATGCTGATCGGCTTCCCGGTCGCCTTCTC
GCTAGCCGCACTTGGGCTGGGTTCAGGCTTCCTGGCCATTCAGATGGGCTGGTTCCCGGCCAGCTTCATGTCCAACCTGC
CGCTCAACATGTTCGGCATCCTGTCGAACGAGTTGCTGCTGGCCATTCCCTTCTTCACCTTCATGGGCGCCATCCTGGAG
AAGTGCGGGCTGGCGGAAGACATGCTTGACTCCATGGGCCAGCTGTTTGGCCCGGCCAAGGGCGGGCTGGGCTACTCGGT
CATTATTGTCGGCTTCATCCTGGGCGCCATCACCGGCACGGTCGCCGGCCAGGTGATTGCCATGGCGTTGATCTCGCTGC
CCGTGATGATCCGCTACGGCTACAACATGCGTTATGCCACCGGTGTGCTGGCCGCCTCCGGCACCATCACCCAGCTGGTG
CCGCCCTCGCTGGTGCTGATTGTCATGGCCGACCAGCTCGGCCGCTCCGTCGGCGACATGTACAAAGGGGCTTGGGGCCC
GTCCATCCTGCAGGTGCTGATTTTTGCCGGCTATACCTTCATGCTGGGTGTCTTCAAACCCCATCATGTGCCAGGCGTGC
CCAAAGATGCCCGTACCCTGAACGGCTGGCCCCTGTGGGCCAAATGCCTGCGCGGCATCATCCCCTCTGCAATTCTCATT
TTCGCCGTGCTGGGTTCCATGGGCGGTCTGCCAGGAATCAACACCGCCATCGCTACTCCTACGGAAGCCGGCGCCATGGG
CGTGGTGGGTGCGCTGATCCTGGCGGCCATGCATAAGCGACTGACCCGCGCGCTGATCTGGGAGGCCATGGTCGGTACCA
TGCGGCTGACCGCCATGGTGGTGTTTATCCTGATCGGCGCTCGCGTCTTTTCCATGGTGTTTCAGGGAGTGGACGGCGCC
AAATGGGTGGAACACATGCTCAGCGGCCTGCCCGGCGGACAGACGGGCTTCCTGATCGCGGTCAACCTCTTTATTTTCTT
CCTGGCCTTCTTCCTCGACTTCTTCGAGATCGCCTTCATCATCCTGCCCATGCTGGGGCCGGTGGCCGACAAGCTGGGCA
TTGACCTGATCTGGTTTGGCGTGTTGCTGTGCGTGAACATGCAGACCAGCTTCATGCACCCGCCGTTCGGCTTTGCGCTG
TTTTACCTGCGCGGGATTGCCGACACGCTGTTCAAGGAAGGCCGCATCCCCCAGGCCATCAAGTCCAGCGATATCTACCT
CGGCGCCATTCCCTGGGTGGCGATGCAGCTGGTGCTCGTGACGATTGTGATTTTCGTGCCGCAAACCGTCACCGTGTTTC
TCGACAAAGAGGAAAAGATCGACATCGACAAGGTGAAGATCGAGATGCCCGCTGAAGCCATCGATGACAAGCCTGCCGAG
CTCAATCCGGGCGAAACGCAGGGACAGCGCGACACGCAGAATGCCGACGACGAGCAGAAGAAGATCGACGATCTGTTCAA
CAAGAAATGA

Upstream 100 bases:

>100_bases
ACCTGCAGGGCAAGTTCGAGATGGACACCCACTACGAAAGGCCGGTTCAATAACCCGCTCCATCGTTCATCCAGAAAAAA
AATACTCTCAGGACCACCAA

Downstream 100 bases:

>100_bases
ACGACATACCTCTTGAAGCGCTGGGGCCGCCGCCCTTTCGCTTCACCCCCTCCGGCCCCCCCGCGATCGAGGGTCCCGCC
TTCTCCCGACTGTTCAAGCT

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MQMENFAPIMFAGLVLIMLIGFPVAFSLAALGLGSGFLAIQMGWFPASFMSNLPLNMFGILSNELLLAIPFFTFMGAILE
KCGLAEDMLDSMGQLFGPAKGGLGYSVIIVGFILGAITGTVAGQVIAMALISLPVMIRYGYNMRYATGVLAASGTITQLV
PPSLVLIVMADQLGRSVGDMYKGAWGPSILQVLIFAGYTFMLGVFKPHHVPGVPKDARTLNGWPLWAKCLRGIIPSAILI
FAVLGSMGGLPGINTAIATPTEAGAMGVVGALILAAMHKRLTRALIWEAMVGTMRLTAMVVFILIGARVFSMVFQGVDGA
KWVEHMLSGLPGGQTGFLIAVNLFIFFLAFFLDFFEIAFIILPMLGPVADKLGIDLIWFGVLLCVNMQTSFMHPPFGFAL
FYLRGIADTLFKEGRIPQAIKSSDIYLGAIPWVAMQLVLVTIVIFVPQTVTVFLDKEEKIDIDKVKIEMPAEAIDDKPAE
LNPGETQGQRDTQNADDEQKKIDDLFNKK

Sequences:

>Translated_509_residues
MQMENFAPIMFAGLVLIMLIGFPVAFSLAALGLGSGFLAIQMGWFPASFMSNLPLNMFGILSNELLLAIPFFTFMGAILE
KCGLAEDMLDSMGQLFGPAKGGLGYSVIIVGFILGAITGTVAGQVIAMALISLPVMIRYGYNMRYATGVLAASGTITQLV
PPSLVLIVMADQLGRSVGDMYKGAWGPSILQVLIFAGYTFMLGVFKPHHVPGVPKDARTLNGWPLWAKCLRGIIPSAILI
FAVLGSMGGLPGINTAIATPTEAGAMGVVGALILAAMHKRLTRALIWEAMVGTMRLTAMVVFILIGARVFSMVFQGVDGA
KWVEHMLSGLPGGQTGFLIAVNLFIFFLAFFLDFFEIAFIILPMLGPVADKLGIDLIWFGVLLCVNMQTSFMHPPFGFAL
FYLRGIADTLFKEGRIPQAIKSSDIYLGAIPWVAMQLVLVTIVIFVPQTVTVFLDKEEKIDIDKVKIEMPAEAIDDKPAE
LNPGETQGQRDTQNADDEQKKIDDLFNKK
>Mature_509_residues
MQMENFAPIMFAGLVLIMLIGFPVAFSLAALGLGSGFLAIQMGWFPASFMSNLPLNMFGILSNELLLAIPFFTFMGAILE
KCGLAEDMLDSMGQLFGPAKGGLGYSVIIVGFILGAITGTVAGQVIAMALISLPVMIRYGYNMRYATGVLAASGTITQLV
PPSLVLIVMADQLGRSVGDMYKGAWGPSILQVLIFAGYTFMLGVFKPHHVPGVPKDARTLNGWPLWAKCLRGIIPSAILI
FAVLGSMGGLPGINTAIATPTEAGAMGVVGALILAAMHKRLTRALIWEAMVGTMRLTAMVVFILIGARVFSMVFQGVDGA
KWVEHMLSGLPGGQTGFLIAVNLFIFFLAFFLDFFEIAFIILPMLGPVADKLGIDLIWFGVLLCVNMQTSFMHPPFGFAL
FYLRGIADTLFKEGRIPQAIKSSDIYLGAIPWVAMQLVLVTIVIFVPQTVTVFLDKEEKIDIDKVKIEMPAEAIDDKPAE
LNPGETQGQRDTQNADDEQKKIDDLFNKK

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=396, Percent_Identity=26.010101010101, Blast_Score=108, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 55009; Mature: 55009

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMENFAPIMFAGLVLIMLIGFPVAFSLAALGLGSGFLAIQMGWFPASFMSNLPLNMFGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCHHHHHH
LSNELLLAIPFFTFMGAILEKCGLAEDMLDSMGQLFGPAKGGLGYSVIIVGFILGAITGT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VAGQVIAMALISLPVMIRYGYNMRYATGVLAASGTITQLVPPSLVLIVMADQLGRSVGDM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
YKGAWGPSILQVLIFAGYTFMLGVFKPHHVPGVPKDARTLNGWPLWAKCLRGIIPSAILI
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FAVLGSMGGLPGINTAIATPTEAGAMGVVGALILAAMHKRLTRALIWEAMVGTMRLTAMV
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFILIGARVFSMVFQGVDGAKWVEHMLSGLPGGQTGFLIAVNLFIFFLAFFLDFFEIAFI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILPMLGPVADKLGIDLIWFGVLLCVNMQTSFMHPPFGFALFYLRGIADTLFKEGRIPQAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
KSSDIYLGAIPWVAMQLVLVTIVIFVPQTVTVFLDKEEKIDIDKVKIEMPAEAIDDKPAE
CCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHEEEECCHHHHCCCCCC
LNPGETQGQRDTQNADDEQKKIDDLFNKK
CCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQMENFAPIMFAGLVLIMLIGFPVAFSLAALGLGSGFLAIQMGWFPASFMSNLPLNMFGI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCHHHHHH
LSNELLLAIPFFTFMGAILEKCGLAEDMLDSMGQLFGPAKGGLGYSVIIVGFILGAITGT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VAGQVIAMALISLPVMIRYGYNMRYATGVLAASGTITQLVPPSLVLIVMADQLGRSVGDM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
YKGAWGPSILQVLIFAGYTFMLGVFKPHHVPGVPKDARTLNGWPLWAKCLRGIIPSAILI
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
FAVLGSMGGLPGINTAIATPTEAGAMGVVGALILAAMHKRLTRALIWEAMVGTMRLTAMV
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFILIGARVFSMVFQGVDGAKWVEHMLSGLPGGQTGFLIAVNLFIFFLAFFLDFFEIAFI
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILPMLGPVADKLGIDLIWFGVLLCVNMQTSFMHPPFGFALFYLRGIADTLFKEGRIPQAI
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
KSSDIYLGAIPWVAMQLVLVTIVIFVPQTVTVFLDKEEKIDIDKVKIEMPAEAIDDKPAE
CCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHEEEECCHHHHCCCCCC
LNPGETQGQRDTQNADDEQKKIDDLFNKK
CCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]