Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787595

Identifier: 91787595

GI number: 91787595

Start: 1766422

End: 1767780

Strand: Reverse

Name: 91787595

Synonym: Bpro_1713

Alternate gene names: NA

Gene position: 1767780-1766422 (Counterclockwise)

Preceding gene: 91787596

Following gene: 91787594

Centisome position: 33.99

GC content: 64.97

Gene sequence:

>1359_bases
ATGAACCTCTACACCAAACTCCAGCAACGCGCCGCCGACAACCAACCCGTGCGCATCGGCCTGATAGGCGCCGGCAAATT
CGGTTCCATGTACCTGGCGCAGATTCCCAGAACCCCCGGCGTGCACCTCGTCGCCATTGCCGACCTGTCGCCCGACGCGG
CCCGCACCAACCTCACCCGCGTCGGCTGGAAGCCCGAAATGAGCCAGGCGGAATCGGCGCAAACGGCGATCAAGACAGGA
GCGACCTGGATCACCGACGACTGGCAGGCGGTGGTCACGCATCCGCAGATCGACATCATCGTGGAATGCACAGGCAACCC
GGTGGCGGCCGTCGAGCACTGCCTGCAGGCCTTTGCGCATGGCAAGCATGTGGTCAACGTGACGGTGGAAGCCGACGCCT
TTTGCGGCCCGCTGCTGGCGCGCAAGGCGGCCGAAGCGGGTGTGGTGTACTCGCTGGCCTTCGGTGACCAGCCGGCGCTG
ATCTGCGACCTGGTGGACTGGGCCCGCACCTGCGGGTTTCCGGTGGTGGCGGCAGGCCGCGGCCATAAATGGCTGCCGCA
TTTTTGCGAATCCACGCCCGATACGGTGTGGGGCAACTACGGCCTCACGCCCGAGCAGGCCCTGCGTGGCGGACTGAACC
CGAAAATGTTCAACAGCTTCCTCGATGGCTCCAAACCGTCCATCGAATGCACTGCCGTGGCCAACGCCACCGGCCTCACC
GTGCCCAGCAACGGCCTGCTCTACCCGCCCGCCAGCGTGGAAGACATTCCCTTTGTGACGCGACCTATTCAAGAGGGCGG
CGTGCTGGAACGCAAGGGCATGGTCGAAGTCATCTCCTCGCTGGAAGCCAATGGCCGCAAGATTCCCTACGACATCCGCA
TGGGAGTCTGGGTCACGGTCGAGGCCGAAACCGACTACATCAAGAACTGCTTTGAAGAGTACAACGCGCATACCGATCCC
AGCGGCCGCTATTTCACGCTGTACAAGCGCTGGCACCTGATCGGGCTGGAGGTCGGCGTGTCGGTGGCCAGCGTGGCGCT
GCGCGGCGAACCGACCGGCGTGGCGACCTGCTGGAACGCCGACGTGGTGGCCACCGCCAAGCGCGACCTCAAACCCGGCG
ACATGCTGGACGGCGAAGGCGGCTATACCGTCTGGGGCAAGCTGCTGCCGGCCGAAACCTCCCTGCAGATGGGCGGCCTG
CCCCTGGGCCTGGCGCACCAGGTCAAGGTGGTGCGGGCGGTCAAGAAGGGCCAGAGCCTGAGCTGGGCCGATGTGGCCAT
GGACACCTCGACGCCCGCCTACAAGGTGCGCCATGAAATGGAAACCATGTTCTCGCCGGCCATCAAGAAAGCTGCCTGA

Upstream 100 bases:

>100_bases
GCATGTCATGCCGGACTTGATCCGGCATCCATGACCCGTTAACCACTTTAATTTCGATCCACCATGGATTGCGGGTCAAG
CCCGCAATGACAGGACCCCA

Downstream 100 bases:

>100_bases
CAGCCTTCTTGCGCTGCGTGCCGGATGATGGGTACATCTGCCATTAACCAGGAACCCGAATGACCGTTGAAAGCGACCCG
TACGCAAGAAAAATCACCTT

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: SAF Domain Protein; Homoserine Dehydrogenase; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTRVGWKPEMSQAESAQTAIKTG
ATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAHGKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPAL
ICDLVDWARTCGFPVVAAGRGHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT
VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTVEAETDYIKNCFEEYNAHTDP
SGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNADVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGL
PLGLAHQVKVVRAVKKGQSLSWADVAMDTSTPAYKVRHEMETMFSPAIKKAA

Sequences:

>Translated_452_residues
MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTRVGWKPEMSQAESAQTAIKTG
ATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAHGKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPAL
ICDLVDWARTCGFPVVAAGRGHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT
VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTVEAETDYIKNCFEEYNAHTDP
SGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNADVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGL
PLGLAHQVKVVRAVKKGQSLSWADVAMDTSTPAYKVRHEMETMFSPAIKKAA
>Mature_452_residues
MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTRVGWKPEMSQAESAQTAIKTG
ATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAHGKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPAL
ICDLVDWARTCGFPVVAAGRGHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT
VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTVEAETDYIKNCFEEYNAHTDP
SGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNADVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGL
PLGLAHQVKVVRAVKKGQSLSWADVAMDTSTPAYKVRHEMETMFSPAIKKAA

Specific function: Unknown

COG id: COG4091

COG function: function code E; Predicted homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48741; Mature: 48741

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTR
CCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEECCCCCCEEEEEEECCCCCHHHCCCEE
VGWKPEMSQAESAQTAIKTGATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAH
CCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC
GKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPALICDLVDWARTCGFPVVAAGR
CCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCC
GHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT
CCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCE
VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTV
ECCCCEECCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEE
EAETDYIKNCFEEYNAHTDPSGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNA
ECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEECC
DVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGLPLGLAHQVKVVRAVKKGQSL
CEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SWADVAMDTSTPAYKVRHEMETMFSPAIKKAA
CCHHEEECCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTR
CCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEECCCCCCEEEEEEECCCCCHHHCCCEE
VGWKPEMSQAESAQTAIKTGATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAH
CCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC
GKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPALICDLVDWARTCGFPVVAAGR
CCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCC
GHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT
CCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCE
VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTV
ECCCCEECCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEE
EAETDYIKNCFEEYNAHTDPSGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNA
ECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEECC
DVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGLPLGLAHQVKVVRAVKKGQSL
CEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
SWADVAMDTSTPAYKVRHEMETMFSPAIKKAA
CCHHEEECCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA