| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787570
Identifier: 91787570
GI number: 91787570
Start: 1740293
End: 1740751
Strand: Reverse
Name: 91787570
Synonym: Bpro_1688
Alternate gene names: NA
Gene position: 1740751-1740293 (Counterclockwise)
Preceding gene: 91787571
Following gene: 91787557
Centisome position: 33.47
GC content: 60.78
Gene sequence:
>459_bases ATGCACTCACTCACCTCAAAAAACAAAACGGCCGCCGCCTGGCTGGCCTTCATCGGCGGCCAGTTGGGACTGCATCGCCT GTACCTGTTTGGTCTGAGAGACCGCTGGCTGTGGGTACACCCCATCGCCGCAGCCCTGGGCTGGTGGGGTGTTGAGCGCG TGCGCTTATACGGCCAGGACGATCAGCTCGCCTGGGTGCTGATTCCGCTGCTGGGCTTCACGCTGGCAGGCACCGCGCTG ACCGCCATCTACTACGGCCTGATGCCGTTCGAAAAATGGAATGCGCACCACAATCCGGATGCGCCCGAAGCCGCCGCCGG CCACACCAATTGGCTCACGATAGGCGCCGTGGTGTTTGCCTTGCTGTTTGGTGCCGTGTCCCTGATGTCCAGCATCGCGT TCAGCTTCCAGCGGTATTTTGAATACCAGGTGGAAGAGGCAAGGAAGATCAGCCAGTAA
Upstream 100 bases:
>100_bases TGGAAATTCGGCGCCTGGCGCGACATCGTCATCATGCAAAAGACCCTGGGCGTGGGCGACACGCAACCGCCTACCGAACT GCCCGCTCCATAATCCCCGC
Downstream 100 bases:
>100_bases ATAGGGCCCCCACGCTTTTCACTGCGTGTAATGCGCTGCCCCCCGAGGGGGCGCTGCGCCTGCGGCCCGGCGGAGCCGGT TCCGCGGCCCCGGCTGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MHSLTSKNKTAAAWLAFIGGQLGLHRLYLFGLRDRWLWVHPIAAALGWWGVERVRLYGQDDQLAWVLIPLLGFTLAGTAL TAIYYGLMPFEKWNAHHNPDAPEAAAGHTNWLTIGAVVFALLFGAVSLMSSIAFSFQRYFEYQVEEARKISQ
Sequences:
>Translated_152_residues MHSLTSKNKTAAAWLAFIGGQLGLHRLYLFGLRDRWLWVHPIAAALGWWGVERVRLYGQDDQLAWVLIPLLGFTLAGTAL TAIYYGLMPFEKWNAHHNPDAPEAAAGHTNWLTIGAVVFALLFGAVSLMSSIAFSFQRYFEYQVEEARKISQ >Mature_152_residues MHSLTSKNKTAAAWLAFIGGQLGLHRLYLFGLRDRWLWVHPIAAALGWWGVERVRLYGQDDQLAWVLIPLLGFTLAGTAL TAIYYGLMPFEKWNAHHNPDAPEAAAGHTNWLTIGAVVFALLFGAVSLMSSIAFSFQRYFEYQVEEARKISQ
Specific function: Unknown
COG id: COG2314
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17093; Mature: 17093
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLTSKNKTAAAWLAFIGGQLGLHRLYLFGLRDRWLWVHPIAAALGWWGVERVRLYGQD CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHEECCC DQLAWVLIPLLGFTLAGTALTAIYYGLMPFEKWNAHHNPDAPEAAAGHTNWLTIGAVVFA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH LLFGAVSLMSSIAFSFQRYFEYQVEEARKISQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHSLTSKNKTAAAWLAFIGGQLGLHRLYLFGLRDRWLWVHPIAAALGWWGVERVRLYGQD CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHEECCC DQLAWVLIPLLGFTLAGTALTAIYYGLMPFEKWNAHHNPDAPEAAAGHTNWLTIGAVVFA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH LLFGAVSLMSSIAFSFQRYFEYQVEEARKISQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA