The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is livM [H]

Identifier: 91787502

GI number: 91787502

Start: 1671717

End: 1672823

Strand: Reverse

Name: livM [H]

Synonym: Bpro_1620

Alternate gene names: 91787502

Gene position: 1672823-1671717 (Counterclockwise)

Preceding gene: 91787503

Following gene: 91787501

Centisome position: 32.17

GC content: 64.32

Gene sequence:

>1107_bases
ATGAGCGCACAAAAATCCAACCTCGAAGTCCTGCCGCGCGGCGTGCAGGTGGCGCTCGTGCTGGGGCTGATCGCCCTCGT
GGCCTTTCCCTTTGCCGGCACCGACTTTTACACCCAGATGGTCACGCGCATGATGATCATGGCAATTTTTGCGATGAGCC
TGGACCTGCTGCAGGGCGTGACCGGCCTGGTCTCGCTGGGTCACGCCGCCTTCTTCGGCATTGCCGGCTACGCCCTGGCC
TTCCTCACCCCGCAGGGCGAGCCCGTCAGCCTGTGGTGGACCCTGCCCGTGGCCGTGCTGGCCTCGGGCCTGGCGGCGCT
GGTGATCGGCTTTTTTGTGGTGCGCACCCACGGCATCTACTTCATCATGGTCACCATGGCCTTTGCCCAGATGGTGTTTT
ACCTGTTCTTTGACAACAAGGTGCTGGGCGGCTCGGACGGGCTGTACATCAACTTCAAGCCCAGCGCCGAGCTCTTCGGC
TGGACGCCCTTTGATCTGGACGGCAAGCGCACGCTGTACTACTTCACGCTGGCCACCTTGCTGGCGGTCTATGCCTTTTT
GCGGCGCCTGCTGTGGAGCCCGTTCGGCCGGGCGCTGGCCGGCATCCGCGTCAACGAGCACCGCATGCGGGCCATGGGCT
ACGGCACCTTCGGCTACAAGCTGGCGGCCTTCACGCTGGCCGGCAGCCTGGCCGGGCTGGCCGGCTACCTGTGGGGCGCG
CAGACCGGCTACATCAACCCGGAGCTGATGGGCTTTCACATGAGCGCGCACGCCATCATGATGGTGATCCTGGGCGGCAT
GGGCAACTTTGCCGGCGCCATTGTGGGCGCCTTTGCCTTCGAGTACCTGCTGCATGTGTTCAAGGACCTGCCCACCGTCG
ATGCCGGGGGGGTGGTAGGCTTGGGGGGCGGCAGCGTGAACCTGGGCAAGCACTGGCAGCTGTGGATGGGTCTGTTCATC
GTGGCGGTGGTGGTATTTGCGCCGCGCGGCCTGCTCGGGCTGGTGGAGCGCTTTGCCAGGAACAGCCAAGACAGCAAAGA
CAGCCAGGACCAGAAACAGGACCAGAAACAGGTCCTGGTCCAGAAACAGGGAGCGGACCATGGCTGA

Upstream 100 bases:

>100_bases
ATACCTTTGGCAAGGTCTTGCTGCCCTCCGTGGCCGGCATGCTGGTCTACATGCTGATGGCCGGCGTTCTGCTGTGGAAA
CCTGAAGGGCTGTTCAAGCA

Downstream 100 bases:

>100_bases
ACTACTGCTGTCGGCGCAGCACCTGACCAAGCGCTTTGGCGGCCTGGCGGCGGTCAACGATGTCTCTGTCGATCTCTGGC
GCAACCACATCCATGCGGTG

Product: inner-membrane translocator

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSAQKSNLEVLPRGVQVALVLGLIALVAFPFAGTDFYTQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIAGYALA
FLTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYLFFDNKVLGGSDGLYINFKPSAELFG
WTPFDLDGKRTLYYFTLATLLAVYAFLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGA
QTGYINPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVGLGGGSVNLGKHWQLWMGLFI
VAVVVFAPRGLLGLVERFARNSQDSKDSQDQKQDQKQVLVQKQGADHG

Sequences:

>Translated_368_residues
MSAQKSNLEVLPRGVQVALVLGLIALVAFPFAGTDFYTQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIAGYALA
FLTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYLFFDNKVLGGSDGLYINFKPSAELFG
WTPFDLDGKRTLYYFTLATLLAVYAFLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGA
QTGYINPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVGLGGGSVNLGKHWQLWMGLFI
VAVVVFAPRGLLGLVERFARNSQDSKDSQDQKQDQKQVLVQKQGADHG
>Mature_367_residues
SAQKSNLEVLPRGVQVALVLGLIALVAFPFAGTDFYTQMVTRMMIMAIFAMSLDLLQGVTGLVSLGHAAFFGIAGYALAF
LTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIYFIMVTMAFAQMVFYLFFDNKVLGGSDGLYINFKPSAELFGW
TPFDLDGKRTLYYFTLATLLAVYAFLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGAQ
TGYINPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVGLGGGSVNLGKHWQLWMGLFIV
AVVVFAPRGLLGLVERFARNSQDSKDSQDQKQDQKQVLVQKQGADHG

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=327, Percent_Identity=29.0519877675841, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 39935; Mature: 39803

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQKSNLEVLPRGVQVALVLGLIALVAFPFAGTDFYTQMVTRMMIMAIFAMSLDLLQGV
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGLVSLGHAAFFGIAGYALAFLTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FIMVTMAFAQMVFYLFFDNKVLGGSDGLYINFKPSAELFGWTPFDLDGKRTLYYFTLATL
HHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
LAVYAFLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGA
HHHHHHHHHHHHCHHHHHHHCCEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QTGYINPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVG
CCCCCCHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LGGGSVNLGKHWQLWMGLFIVAVVVFAPRGLLGLVERFARNSQDSKDSQDQKQDQKQVLV
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QKQGADHG
HHCCCCCC
>Mature Secondary Structure 
SAQKSNLEVLPRGVQVALVLGLIALVAFPFAGTDFYTQMVTRMMIMAIFAMSLDLLQGV
CCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGLVSLGHAAFFGIAGYALAFLTPQGEPVSLWWTLPVAVLASGLAALVIGFFVVRTHGIY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FIMVTMAFAQMVFYLFFDNKVLGGSDGLYINFKPSAELFGWTPFDLDGKRTLYYFTLATL
HHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
LAVYAFLRRLLWSPFGRALAGIRVNEHRMRAMGYGTFGYKLAAFTLAGSLAGLAGYLWGA
HHHHHHHHHHHHCHHHHHHHCCEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
QTGYINPELMGFHMSAHAIMMVILGGMGNFAGAIVGAFAFEYLLHVFKDLPTVDAGGVVG
CCCCCCHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LGGGSVNLGKHWQLWMGLFIVAVVVFAPRGLLGLVERFARNSQDSKDSQDQKQDQKQVLV
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QKQGADHG
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]