| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787496
Identifier: 91787496
GI number: 91787496
Start: 1665566
End: 1666846
Strand: Direct
Name: 91787496
Synonym: Bpro_1613
Alternate gene names: NA
Gene position: 1665566-1666846 (Clockwise)
Preceding gene: 91787495
Following gene: 91787498
Centisome position: 32.03
GC content: 57.22
Gene sequence:
>1281_bases ATGCACTTCTTTAAAACTCCAGCGATCGCAGCCGCGCTCGCGATCCTTCTGTCCTTTGCCCAGACTGAACACGCAAGTGC ACAGGCTGGTGTGCAGGCAAACACTGCTGCAAATGGCCCAGGGATGCCTGCAGTGCCAGACCGGAACAACCTCTATAGCG AAACGGTCGCCGGACGCTTTTCCGCGGCGGTGTCCGGAGCACTGGAGAGGGTATATGTTCCCAATCGATCGGCCAATACC GTAACCGTTATTGATCCGGGCACGCTGAAAGTGGTCGACACGCTCAAGGTGGGCGTGCACCCGCAACACATAGTTCCCTC CTGGGATCTGAAAACCTTATGGGTGGCCAACAACGCAGAAGGAAGAACAGACGGCAGCCTGACGCCGATCGACCCGCGTA CAGGCAAAGTCGGTCCCTCGATTCCCGTGGATGATCCGTACAACCTGTACTGGTCGCTGGATGGCCGCTATGCCATCGTG GTCGCTGAAGCCTTCAAAAGGCTGGATTTCCGCGACCCCCAAAGCATGAAGCTGGAATTCTCAATCAGCACACCGGCATG TGCGGGCATCAATCATGCGGATTTCTCGATGGACGGGCGTTATGCCGTATTTACCTGCGAGTTCGGCGGCGCGATTACCA AGATCGACCTGGCTACCCGTCGAATCGTGGAGACGATCAAACTCAGCGCTTATTTCAATCGCCCCGACGTGCTCGCGTTG TTGGCCAAACCAGGCAAGAAACCGATGCGCGTGCCGGACCCCAGCAACCCTGAAGCCAGGGTCAACACCAAATTAGGCAT GCCCCAGGACATTCGAATGTCCCCAGACGGTAAAACGCTCTTCATTGCGGACATGATCTCCGATGGCGTGCATGTGGTGG ACTTTGAATCATTTCGACAGGTTGGCTTTATTTCCACCGGCGTCGGTGCGCATGGGCTATACCCGAGCCGCGATGGGAAG AGTCTGTATGTCGCCAACCGGGGCAGCAACAAGATTCGCGGTGACGCTAAAGGCAAGGGCGGCGTTTCGGTGATCGACTT CGCGACCCGAAAAGTGACGGCCACCTGGGTGGTGCCCGGAGGAGGAAGCCCGGATATGGGAAATGTCAGCGCTGATGGCA AATATCTTTGGCTGTCCGGTAGATACGACAATGAGGTTTACCGTTTTGACACCAGCACGGGCGCAGTAGACAAAGTCAAA GTTGGCCGCGAGCCGCACGGCTTGACTGTGTGGCCGCAGCCCGGCCGGTATTCATTGGGCCACACGGGCAACATGCGTTA A
Upstream 100 bases:
>100_bases CAGACATGATCGTGGACAAGAGCGTTCAATCGATTCGCGAGGCAATTACGGCCCGTCCCTAGCGACACATCATTTTTCAA CTCACAAAACTTTATCTGAC
Downstream 100 bases:
>100_bases TTTTCTCGCCCATGCGGGCCTTGGATGCGACACTTTTTTCTGTCGATTGTCCCGGGAAAGCCCAATCCGTCACTCGCCGG TGTTGGACAACGAGGGTATC
Product: hypothetical protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Cytochrome D1 Heme Region; Signal Peptide Protein; WD40 Domain-Containing Protein; IPT/TIG Domain Protein; Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Signal Peptide; Surface Antigen Gene; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; Surface Layer Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Exported Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MHFFKTPAIAAALAILLSFAQTEHASAQAGVQANTAANGPGMPAVPDRNNLYSETVAGRFSAAVSGALERVYVPNRSANT VTVIDPGTLKVVDTLKVGVHPQHIVPSWDLKTLWVANNAEGRTDGSLTPIDPRTGKVGPSIPVDDPYNLYWSLDGRYAIV VAEAFKRLDFRDPQSMKLEFSISTPACAGINHADFSMDGRYAVFTCEFGGAITKIDLATRRIVETIKLSAYFNRPDVLAL LAKPGKKPMRVPDPSNPEARVNTKLGMPQDIRMSPDGKTLFIADMISDGVHVVDFESFRQVGFISTGVGAHGLYPSRDGK SLYVANRGSNKIRGDAKGKGGVSVIDFATRKVTATWVVPGGGSPDMGNVSADGKYLWLSGRYDNEVYRFDTSTGAVDKVK VGREPHGLTVWPQPGRYSLGHTGNMR
Sequences:
>Translated_426_residues MHFFKTPAIAAALAILLSFAQTEHASAQAGVQANTAANGPGMPAVPDRNNLYSETVAGRFSAAVSGALERVYVPNRSANT VTVIDPGTLKVVDTLKVGVHPQHIVPSWDLKTLWVANNAEGRTDGSLTPIDPRTGKVGPSIPVDDPYNLYWSLDGRYAIV VAEAFKRLDFRDPQSMKLEFSISTPACAGINHADFSMDGRYAVFTCEFGGAITKIDLATRRIVETIKLSAYFNRPDVLAL LAKPGKKPMRVPDPSNPEARVNTKLGMPQDIRMSPDGKTLFIADMISDGVHVVDFESFRQVGFISTGVGAHGLYPSRDGK SLYVANRGSNKIRGDAKGKGGVSVIDFATRKVTATWVVPGGGSPDMGNVSADGKYLWLSGRYDNEVYRFDTSTGAVDKVK VGREPHGLTVWPQPGRYSLGHTGNMR >Mature_426_residues MHFFKTPAIAAALAILLSFAQTEHASAQAGVQANTAANGPGMPAVPDRNNLYSETVAGRFSAAVSGALERVYVPNRSANT VTVIDPGTLKVVDTLKVGVHPQHIVPSWDLKTLWVANNAEGRTDGSLTPIDPRTGKVGPSIPVDDPYNLYWSLDGRYAIV VAEAFKRLDFRDPQSMKLEFSISTPACAGINHADFSMDGRYAVFTCEFGGAITKIDLATRRIVETIKLSAYFNRPDVLAL LAKPGKKPMRVPDPSNPEARVNTKLGMPQDIRMSPDGKTLFIADMISDGVHVVDFESFRQVGFISTGVGAHGLYPSRDGK SLYVANRGSNKIRGDAKGKGGVSVIDFATRKVTATWVVPGGGSPDMGNVSADGKYLWLSGRYDNEVYRFDTSTGAVDKVK VGREPHGLTVWPQPGRYSLGHTGNMR
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45911; Mature: 45911
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFFKTPAIAAALAILLSFAQTEHASAQAGVQANTAANGPGMPAVPDRNNLYSETVAGRF CCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHH SAAVSGALERVYVPNRSANTVTVIDPGTLKVVDTLKVGVHPQHIVPSWDLKTLWVANNAE HHHHHHHHHEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCC GRTDGSLTPIDPRTGKVGPSIPVDDPYNLYWSLDGRYAIVVAEAFKRLDFRDPQSMKLEF CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCEEEEE SISTPACAGINHADFSMDGRYAVFTCEFGGAITKIDLATRRIVETIKLSAYFNRPDVLAL EECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHEEEEEEECCCCEEEE LAKPGKKPMRVPDPSNPEARVNTKLGMPQDIRMSPDGKTLFIADMISDGVHVVDFESFRQ EECCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCEEEEEEHHHCCEEEEEHHHHHH VGFISTGVGAHGLYPSRDGKSLYVANRGSNKIRGDAKGKGGVSVIDFATRKVTATWVVPG CCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECC GGSPDMGNVSADGKYLWLSGRYDNEVYRFDTSTGAVDKVKVGREPHGLTVWPQPGRYSLG CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCC HTGNMR CCCCCC >Mature Secondary Structure MHFFKTPAIAAALAILLSFAQTEHASAQAGVQANTAANGPGMPAVPDRNNLYSETVAGRF CCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHH SAAVSGALERVYVPNRSANTVTVIDPGTLKVVDTLKVGVHPQHIVPSWDLKTLWVANNAE HHHHHHHHHEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCC GRTDGSLTPIDPRTGKVGPSIPVDDPYNLYWSLDGRYAIVVAEAFKRLDFRDPQSMKLEF CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCEEEEE SISTPACAGINHADFSMDGRYAVFTCEFGGAITKIDLATRRIVETIKLSAYFNRPDVLAL EECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHEEEEEEECCCCEEEE LAKPGKKPMRVPDPSNPEARVNTKLGMPQDIRMSPDGKTLFIADMISDGVHVVDFESFRQ EECCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCEEEEEEHHHCCEEEEEHHHHHH VGFISTGVGAHGLYPSRDGKSLYVANRGSNKIRGDAKGKGGVSVIDFATRKVTATWVVPG CCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECC GGSPDMGNVSADGKYLWLSGRYDNEVYRFDTSTGAVDKVKVGREPHGLTVWPQPGRYSLG CCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCC HTGNMR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA