The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787454

Identifier: 91787454

GI number: 91787454

Start: 1616181

End: 1616609

Strand: Direct

Name: 91787454

Synonym: Bpro_1565

Alternate gene names: NA

Gene position: 1616181-1616609 (Clockwise)

Preceding gene: 91787453

Following gene: 91787455

Centisome position: 31.08

GC content: 57.58

Gene sequence:

>429_bases
TTGCGCATAACCCCGCTCGAGGTCACTTCTGATTTACAAGGTTTAGGGAGTGTCTATAATCACAATAACTTGCGATTTAT
CTTGGTTAAGTCACAGCATATGAGAGTTTCTTCTTCCACCAGTCGACTTCCGTTTGAAGCGGAGGATGTGTTGCGCGCGC
TCGCCGGCCGCGTTCGTGTAGCCCGGAAAGCGCGCGGCCTGACTCAGCCTGATTTGGCGGCAAAGGCCGGAATCAGCACC
AACACCCTGTTGGCTATGGAGAAAGGCACTTCCAGTGTCCAGCTCGGGTACTGGCTCCAAGTTTTGTGGGCCCTTGACCT
CTTGAGCGGCTTTGCGGAACAGGTTGGCCTCCTCGGACGAGAAGCCGGGGACGTCGCACTGCTGGAGGCCCAACTTCCCC
ACCGCGTCCGCGGCGCAGGCACGCGATGA

Upstream 100 bases:

>100_bases
CCGGTGCACCGCATCCAGTACCGGTTGATTCGAACCGGCCGGAAGCGCTGGTGTTCATCGGTTCTTAGGTCTTTGAGTTT
GCACTCACCCAACCCGCTGG

Downstream 100 bases:

>100_bases
GCGCCACAGAAAAGCCGGTTTGGGTGTGGCTACCCGGCCAGGCGCAACCAGTGCATTGCGGCACATTCTCCCTGCAGGGA
GGCGTGGGGACTTTTCACTA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRVARKARGLTQPDLAAKAGIST
NTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGREAGDVALLEAQLPHRVRGAGTR

Sequences:

>Translated_142_residues
MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRVARKARGLTQPDLAAKAGIST
NTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGREAGDVALLEAQLPHRVRGAGTR
>Mature_142_residues
MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRVARKARGLTQPDLAAKAGIST
NTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGREAGDVALLEAQLPHRVRGAGTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15434; Mature: 15434

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRV
CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHH
ARKARGLTQPDLAAKAGISTNTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGR
HHHHCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EAGDVALLEAQLPHRVRGAGTR
CCCCEEEEECCCCHHCCCCCCC
>Mature Secondary Structure
MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRV
CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHH
ARKARGLTQPDLAAKAGISTNTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGR
HHHHCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
EAGDVALLEAQLPHRVRGAGTR
CCCCEEEEECCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA