| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787448
Identifier: 91787448
GI number: 91787448
Start: 1609945
End: 1610619
Strand: Direct
Name: 91787448
Synonym: Bpro_1558
Alternate gene names: NA
Gene position: 1609945-1610619 (Clockwise)
Preceding gene: 91787447
Following gene: 91787449
Centisome position: 30.96
GC content: 55.56
Gene sequence:
>675_bases ATGGCTCGCGACAGCTCCCCCAAAGAGCGCCAACAGAAGCAGCTTGAGCGTAAGCAGGGACGGCGCGCGAGTTACGACCG TATCCTGATCGTTTCTGAAGGCAGCAAGACCGAGCCAAACTACTTTCGTGAGATCCGTGCAGCCTATCGCTTGCACACTG CCAACGTGGAAGTCCGGTCCAGCGAATTGGGCACTGCGCCTATTCAGGTGGTGCAGTACGCCCAAGCGTTGTTTGAAGAT GGCGACCGCCACAAGAACATTCAGCGTCGCACATTCGAAAAGGTCTATGCCGTTTTTGATCGTGATGACCATGACAGCTA TCACGATGCTCTGGCGCTGGCTGCTTCGCTTGATGGCAAGCTCAGGAACGATGCCAAGCAGCCGGTTGCTTTTCAGGCAA TTGCTTCCGTGCCTAGTTTTGAGCTCTGGCTGTTGCTGCATTTTGAGGGCATTCATGCTCCTCTGCATCGTGATGAAGTG ATGCGCCGCCTCAAGCTGCACATTCCGGGCTATGACAAAGGTGCGGGCAACACATTCGAGATCACCGGTGAGCATTTGTC CGTCGCCACCCAGCGTGCAGAAAGGTTGGCGGTGCGCTTCACAGCGCACACCGATCCCGAACCATTCACCGCCATTGTCG AATTGGTGAAGTTGCTGACAACACTTCGTGGCTGA
Upstream 100 bases:
>100_bases AATTCAGCCCGCGAAAGAACGAGGCACTGGAACGCGGCTACCTGATGGGACGGTACGGCGGCGTGCCTTTCCTCAACCAC ACCCTGGGGCTGAAACACTG
Downstream 100 bases:
>100_bases CATCGCAGCCGTGAGCGCCGCCGTTGCAGCGCGCATTGCTACGCGGTCTGTTGCATCTGCTGTGGTCGGAAGCGAACCTC ACGCGCTGGCACCCGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Csm2 Family CRISPR-Associated Protein
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MARDSSPKERQQKQLERKQGRRASYDRILIVSEGSKTEPNYFREIRAAYRLHTANVEVRSSELGTAPIQVVQYAQALFED GDRHKNIQRRTFEKVYAVFDRDDHDSYHDALALAASLDGKLRNDAKQPVAFQAIASVPSFELWLLLHFEGIHAPLHRDEV MRRLKLHIPGYDKGAGNTFEITGEHLSVATQRAERLAVRFTAHTDPEPFTAIVELVKLLTTLRG
Sequences:
>Translated_224_residues MARDSSPKERQQKQLERKQGRRASYDRILIVSEGSKTEPNYFREIRAAYRLHTANVEVRSSELGTAPIQVVQYAQALFED GDRHKNIQRRTFEKVYAVFDRDDHDSYHDALALAASLDGKLRNDAKQPVAFQAIASVPSFELWLLLHFEGIHAPLHRDEV MRRLKLHIPGYDKGAGNTFEITGEHLSVATQRAERLAVRFTAHTDPEPFTAIVELVKLLTTLRG >Mature_223_residues ARDSSPKERQQKQLERKQGRRASYDRILIVSEGSKTEPNYFREIRAAYRLHTANVEVRSSELGTAPIQVVQYAQALFEDG DRHKNIQRRTFEKVYAVFDRDDHDSYHDALALAASLDGKLRNDAKQPVAFQAIASVPSFELWLLLHFEGIHAPLHRDEVM RRLKLHIPGYDKGAGNTFEITGEHLSVATQRAERLAVRFTAHTDPEPFTAIVELVKLLTTLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25559; Mature: 25428
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDSSPKERQQKQLERKQGRRASYDRILIVSEGSKTEPNYFREIRAAYRLHTANVEVRS CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEC SELGTAPIQVVQYAQALFEDGDRHKNIQRRTFEKVYAVFDRDDHDSYHDALALAASLDGK CCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCH LRNDAKQPVAFQAIASVPSFELWLLLHFEGIHAPLHRDEVMRRLKLHIPGYDKGAGNTFE HHCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE ITGEHLSVATQRAERLAVRFTAHTDPEPFTAIVELVKLLTTLRG ECCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARDSSPKERQQKQLERKQGRRASYDRILIVSEGSKTEPNYFREIRAAYRLHTANVEVRS CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEC SELGTAPIQVVQYAQALFEDGDRHKNIQRRTFEKVYAVFDRDDHDSYHDALALAASLDGK CCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCH LRNDAKQPVAFQAIASVPSFELWLLLHFEGIHAPLHRDEVMRRLKLHIPGYDKGAGNTFE HHCCCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE ITGEHLSVATQRAERLAVRFTAHTDPEPFTAIVELVKLLTTLRG ECCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA