| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787447
Identifier: 91787447
GI number: 91787447
Start: 1608677
End: 1609945
Strand: Direct
Name: 91787447
Synonym: Bpro_1557
Alternate gene names: NA
Gene position: 1608677-1609945 (Clockwise)
Preceding gene: 91787446
Following gene: 91787448
Centisome position: 30.93
GC content: 57.68
Gene sequence:
>1269_bases ATGCTGGTCGAGTTCCGCGTCAAGAACTTCCGCAGCCTGCGCGACGAGCAGGTGCTTAGTCTTGTTGCGTCCAAGGACAA GACCCTGCAGGACACCCACACCCAAGCGACCGGCATCAGTGCCGCACCCACCCTGGTGCGCAGTGCTGTGGTCTACGGTG CCAACGCGAGCGGCAAGTCCAATCTCATCAAAGCCCTGCAATACATGCGCGGCGTAGTGACCGAGTCCGCGACGGCGATC CAGCCCGGTCAGGCCTTTGCAGTTCAGCCCTTCCGACTCGATGTCGATTCCGCCAGTCAGCCCAGCGAGTTCGAGGTCAC GTTCCTGCTCGATGGTGTGCGCTACCAATATGGATTTGCCATGACTGCGCAGCGCATCGTCAGCGAGCATTTGTTGGTTT ACAAGGCGTTCAAGCCGCAGCGCTGGTTTACGCGCCATTTTGACACTGACACCGACAAGGATGTCTACGATTTCGGTCCC GGTCTGAAAGGCCCCAAGAACCTGTGGGAAGGCGCTACCCGACCGAACGCCCTCTTCTTGTCGATGGCCGTACAACTCAA TAGCGAAGCCTTGCGCCCGGTGTTCGACTGGTTCGTGAATCGGCTGGTCATCTTCAACGAGCAAGCCCAACTCAGTCCGC AGGTGTCTATCCAGATGCTCAAGCAGGTTGACGGCCGCAAGGAGATCTGCAACTTCCTCTCTGCCGCCGACATAAGCATC GCCGACATTGATGTGGAAACACGCAAAGTCCCTGGGCAGGCCGTTCATTTTGACTTGGTGGCCGGTAAAACCGAAGTGCG GTCGGAAGAAATGGAAGAACACAAGCTGCGCTTCCACCACGTCACCGAACAAGGCAAAGCCGTCTTTGATCTGATGGACG AGTCCAACGGCACGCGGAATCTGCTGTTTCTTGCAGGGCCAGTGCTAGACATCCTCAGCAAAGGGCTGACGCTGGTCATC GACGAACTCGATACCAGTTTGCACACTTTGCTGGTGCGGGAACTGGTGCGACTGTTCCACCGCCCGGAGATCAACACCGG CGGTGCGCAACTGATATTCACGACTCACGACACGTCACTGCTGGACGCACCAGATCTGTTCCGACGCGATCAAGTGTGGT TCGTAGAAAAAGACCGTGATCAGACCTCGGCATTGGTCAGCTTATCCGAATTCAGCCCGCGAAAGAACGAGGCACTGGAA CGCGGCTACCTGATGGGACGGTACGGCGGCGTGCCTTTCCTCAACCACACCCTGGGGCTGAAACACTGA
Upstream 100 bases:
>100_bases ACCTGCATCACTCAAACAACCATTGGATGCAGCAATATATTTATTTTTTGCTCTTTTAAGTCATAATGAGACTATATTTT AGACAACTAAGGTGAATGCA
Downstream 100 bases:
>100_bases TGGCTCGCGACAGCTCCCCCAAAGAGCGCCAACAGAAGCAGCTTGAGCGTAAGCAGGGACGGCGCGCGAGTTACGACCGT ATCCTGATCGTTTCTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLVEFRVKNFRSLRDEQVLSLVASKDKTLQDTHTQATGISAAPTLVRSAVVYGANASGKSNLIKALQYMRGVVTESATAI QPGQAFAVQPFRLDVDSASQPSEFEVTFLLDGVRYQYGFAMTAQRIVSEHLLVYKAFKPQRWFTRHFDTDTDKDVYDFGP GLKGPKNLWEGATRPNALFLSMAVQLNSEALRPVFDWFVNRLVIFNEQAQLSPQVSIQMLKQVDGRKEICNFLSAADISI ADIDVETRKVPGQAVHFDLVAGKTEVRSEEMEEHKLRFHHVTEQGKAVFDLMDESNGTRNLLFLAGPVLDILSKGLTLVI DELDTSLHTLLVRELVRLFHRPEINTGGAQLIFTTHDTSLLDAPDLFRRDQVWFVEKDRDQTSALVSLSEFSPRKNEALE RGYLMGRYGGVPFLNHTLGLKH
Sequences:
>Translated_422_residues MLVEFRVKNFRSLRDEQVLSLVASKDKTLQDTHTQATGISAAPTLVRSAVVYGANASGKSNLIKALQYMRGVVTESATAI QPGQAFAVQPFRLDVDSASQPSEFEVTFLLDGVRYQYGFAMTAQRIVSEHLLVYKAFKPQRWFTRHFDTDTDKDVYDFGP GLKGPKNLWEGATRPNALFLSMAVQLNSEALRPVFDWFVNRLVIFNEQAQLSPQVSIQMLKQVDGRKEICNFLSAADISI ADIDVETRKVPGQAVHFDLVAGKTEVRSEEMEEHKLRFHHVTEQGKAVFDLMDESNGTRNLLFLAGPVLDILSKGLTLVI DELDTSLHTLLVRELVRLFHRPEINTGGAQLIFTTHDTSLLDAPDLFRRDQVWFVEKDRDQTSALVSLSEFSPRKNEALE RGYLMGRYGGVPFLNHTLGLKH >Mature_422_residues MLVEFRVKNFRSLRDEQVLSLVASKDKTLQDTHTQATGISAAPTLVRSAVVYGANASGKSNLIKALQYMRGVVTESATAI QPGQAFAVQPFRLDVDSASQPSEFEVTFLLDGVRYQYGFAMTAQRIVSEHLLVYKAFKPQRWFTRHFDTDTDKDVYDFGP GLKGPKNLWEGATRPNALFLSMAVQLNSEALRPVFDWFVNRLVIFNEQAQLSPQVSIQMLKQVDGRKEICNFLSAADISI ADIDVETRKVPGQAVHFDLVAGKTEVRSEEMEEHKLRFHHVTEQGKAVFDLMDESNGTRNLLFLAGPVLDILSKGLTLVI DELDTSLHTLLVRELVRLFHRPEINTGGAQLIFTTHDTSLLDAPDLFRRDQVWFVEKDRDQTSALVSLSEFSPRKNEALE RGYLMGRYGGVPFLNHTLGLKH
Specific function: Unknown
COG id: COG1106
COG function: function code R; Predicted ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47486; Mature: 47486
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVEFRVKNFRSLRDEQVLSLVASKDKTLQDTHTQATGISAAPTLVRSAVVYGANASGKS CEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCHH NLIKALQYMRGVVTESATAIQPGQAFAVQPFRLDVDSASQPSEFEVTFLLDGVRYQYGFA HHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHH MTAQRIVSEHLLVYKAFKPQRWFTRHFDTDTDKDVYDFGPGLKGPKNLWEGATRPNALFL HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCEEEE SMAVQLNSEALRPVFDWFVNRLVIFNEQAQLSPQVSIQMLKQVDGRKEICNFLSAADISI EEEHHHCHHHHHHHHHHHHHHEEEECCCHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCEE ADIDVETRKVPGQAVHFDLVAGKTEVRSEEMEEHKLRFHHVTEQGKAVFDLMDESNGTRN EEECCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCE LLFLAGPVLDILSKGLTLVIDELDTSLHTLLVRELVRLFHRPEINTGGAQLIFTTHDTSL EEEEECHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC LDAPDLFRRDQVWFVEKDRDQTSALVSLSEFSPRKNEALERGYLMGRYGGVPFLNHTLGL CCCHHHHCCCCEEEEECCCCHHHHHEEHHHCCCCHHHHHHHCCEEECCCCCCHHHCCCCC KH CC >Mature Secondary Structure MLVEFRVKNFRSLRDEQVLSLVASKDKTLQDTHTQATGISAAPTLVRSAVVYGANASGKS CEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCHH NLIKALQYMRGVVTESATAIQPGQAFAVQPFRLDVDSASQPSEFEVTFLLDGVRYQYGFA HHHHHHHHHHHHHHCCCCEECCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHH MTAQRIVSEHLLVYKAFKPQRWFTRHFDTDTDKDVYDFGPGLKGPKNLWEGATRPNALFL HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCEEEE SMAVQLNSEALRPVFDWFVNRLVIFNEQAQLSPQVSIQMLKQVDGRKEICNFLSAADISI EEEHHHCHHHHHHHHHHHHHHEEEECCCHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCEE ADIDVETRKVPGQAVHFDLVAGKTEVRSEEMEEHKLRFHHVTEQGKAVFDLMDESNGTRN EEECCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCE LLFLAGPVLDILSKGLTLVIDELDTSLHTLLVRELVRLFHRPEINTGGAQLIFTTHDTSL EEEEECHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC LDAPDLFRRDQVWFVEKDRDQTSALVSLSEFSPRKNEALERGYLMGRYGGVPFLNHTLGL CCCHHHHCCCCEEEEECCCCHHHHHEEHHHCCCCHHHHHHHCCEEECCCCCCHHHCCCCC KH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA