Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787423

Identifier: 91787423

GI number: 91787423

Start: 1585982

End: 1586362

Strand: Reverse

Name: 91787423

Synonym: Bpro_1533

Alternate gene names: NA

Gene position: 1586362-1585982 (Counterclockwise)

Preceding gene: 91787424

Following gene: 91787421

Centisome position: 30.51

GC content: 62.73

Gene sequence:

>381_bases
ATGGAAATCAAGCCCATCCACACCGACGCCGACTACAAGGCGACGCTGCGGGAAGTGTCCGGCCTTATCGATCTGGACCC
GGAACCCGCCACGCCAGAGGGCGACCGCCTCGACATCCTAGCGACGCTCGTGCAGGCCTATGAAGCGAAGCACTACCCGA
TCGCCCCACCCGACCCTATCGAGGCGATCAAGTTCCGCATGGATCAAGAGGGTCTGACGGTCAAGGATTTGGAGTCCATC
ATCGGGCCGTCGCACCGCGTCTATGAGGTGCTGAATCGCACGCGCCCGCTAACGCTGCACATGATCCGTCGCCTGCATCG
CCGGCTGCACATCCCCGCCGAGGTGCTGATCCACCAAGGCGAAGAGGTCGCCATCGCTTGA

Upstream 100 bases:

>100_bases
TACAAAATGCAGTGGGTCTACGTCAAGTTCGTCGGCACACACAAGCACTACGACACCATCGACGCTGAAACCGTCGAGCA
ATTTTGAAAGGAGTTTGAGC

Downstream 100 bases:

>100_bases
CCGGCCAGCCTGCCGGAGTTTTTAACGCAATGGAGTGCGACAAGTTTCAGCGCAAGTTGTTTCCTGGCGCAAAGCCTCCA
GCCCTTGAGGCATGTCAGCC

Product: transcription regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcription Regulator; Transcription Regulator With HTH Domain Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Xre Family; Transcription Regulator Containing HTH Domain; Transcription Regulator Protein; Transcritional Regulatior Protein; Transcription Regulator Containing Helix Turn Helix Domain; HTH_3 Family Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator YgjM; Transcriptional Regulator Protein; Transcription Regulator With HTH Domain-Containing Protein

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MEIKPIHTDADYKATLREVSGLIDLDPEPATPEGDRLDILATLVQAYEAKHYPIAPPDPIEAIKFRMDQEGLTVKDLESI
IGPSHRVYEVLNRTRPLTLHMIRRLHRRLHIPAEVLIHQGEEVAIA

Sequences:

>Translated_126_residues
MEIKPIHTDADYKATLREVSGLIDLDPEPATPEGDRLDILATLVQAYEAKHYPIAPPDPIEAIKFRMDQEGLTVKDLESI
IGPSHRVYEVLNRTRPLTLHMIRRLHRRLHIPAEVLIHQGEEVAIA
>Mature_126_residues
MEIKPIHTDADYKATLREVSGLIDLDPEPATPEGDRLDILATLVQAYEAKHYPIAPPDPIEAIKFRMDQEGLTVKDLESI
IGPSHRVYEVLNRTRPLTLHMIRRLHRRLHIPAEVLIHQGEEVAIA

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14312; Mature: 14312

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKPIHTDADYKATLREVSGLIDLDPEPATPEGDRLDILATLVQAYEAKHYPIAPPDPI
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
EAIKFRMDQEGLTVKDLESIIGPSHRVYEVLNRTRPLTLHMIRRLHRRLHIPAEVLIHQG
HHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCC
EEVAIA
CEEECC
>Mature Secondary Structure
MEIKPIHTDADYKATLREVSGLIDLDPEPATPEGDRLDILATLVQAYEAKHYPIAPPDPI
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
EAIKFRMDQEGLTVKDLESIIGPSHRVYEVLNRTRPLTLHMIRRLHRRLHIPAEVLIHQG
HHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCC
EEVAIA
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA