| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787411
Identifier: 91787411
GI number: 91787411
Start: 1573647
End: 1574612
Strand: Direct
Name: 91787411
Synonym: Bpro_1517
Alternate gene names: NA
Gene position: 1573647-1574612 (Clockwise)
Preceding gene: 91787410
Following gene: 91787413
Centisome position: 30.26
GC content: 63.04
Gene sequence:
>966_bases ATGACGGCTGAAACCGCCGACACCAAAACCGACACCCAGCCCGCTAACCGGCACCTTTCGGGCCTGCCTGCCCGTGGCCT TTCATGGGCCCGGCACAGGCTTCAGCATATCTACAGGCCGCTCCGGCGCGCTGTGGATCAATGGATTGAGGCCGATGGCC TGCGCATGAGTGCGGCCATGTCCTTCTACGGCATTCTCAGTCTGGCGCCCCTGCTGGTCTTGCTGGTGGCGGTGCTGGGC TGGTGGGTGGAGCAGAGCGTGATTGAAATCAGCCTGGTCGACCAGATTCGCAGTGTGGTGGGTGCCCAAGGCGCGCAGGT GGTCCAGCAGGCGCTTTCCAGCGCGCGGGAGCCCTCGCAGGGAATTGCCGCCTCGCTGTTTGCGTTTGGCCTGCTGCTTT CCGGCGCGACCGGCGTGTTTTCCGAGTTGCAGGACGCCTTCGAACGTTTGTGGCGGCAGGGCAGCGGCAAGCCGCCCCAG CAAAAGTGGTGGTACACCGCTTCCTTGCGCCTGCGCGGCGTGGCTTATATCCTGGCCATCGGCTTCCTGTTGCTGGTGTC GCTCGTGGTTTCCACTTTATTAAACCTTCTGTCGGGCTGGGCGGGCGGGTATTGGCCTGTCGAAAAATTCGCTTACGCCA TCAACGAGGTGGCATCCTTCGGCTTTTCCGTGGCGCTGTTTGTGGCCCTGATGAGAATGAGCGCCGGGCCCAAGCCGGCC CTGCGCTACCTGGTGAGGGGGGCGGCGGTAGGTGCGCTGCTGTTTGCGGTCGGCAAGCACCTGATGGCTTTTTACCTGTC TACCGCAGCCGTGGTGTCTGCCTATGGTGCCGCAGGCTCCCTGGTGGTCATCCTGATGTGGATCTATTTCTCATCGGCGG TGCTTCTGCTGGCCGCCAGCATTGCGCGGGCCTGGGCTGACGAGGCTCGCGAGCGGGAGGGTGTTCAACCTAGAAACAGC AGTTGA
Upstream 100 bases:
>100_bases CTGATATCTTTCCCGTCCGGCCGGACCGTCGGCGCGCACCTACGGTCCTTCGCGGGGCCGTCTGGCTCCGTATCTGCCAC GGTATTCATAAGCTGTCTGC
Downstream 100 bases:
>100_bases CCGCTCGCAAACTTCAGGAAAGCCGCATGCACATTGACGTTCCCCTCTTCGATTGGATTCACCTTCTGGGTAACAGCGCT ATGCATCCGATTGCACCGTG
Product: ribonuclease BN
Products: NA
Alternate protein names: Ribonuclease Bn
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTAETADTKTDTQPANRHLSGLPARGLSWARHRLQHIYRPLRRAVDQWIEADGLRMSAAMSFYGILSLAPLLVLLVAVLG WWVEQSVIEISLVDQIRSVVGAQGAQVVQQALSSAREPSQGIAASLFAFGLLLSGATGVFSELQDAFERLWRQGSGKPPQ QKWWYTASLRLRGVAYILAIGFLLLVSLVVSTLLNLLSGWAGGYWPVEKFAYAINEVASFGFSVALFVALMRMSAGPKPA LRYLVRGAAVGALLFAVGKHLMAFYLSTAAVVSAYGAAGSLVVILMWIYFSSAVLLLAASIARAWADEAREREGVQPRNS S
Sequences:
>Translated_321_residues MTAETADTKTDTQPANRHLSGLPARGLSWARHRLQHIYRPLRRAVDQWIEADGLRMSAAMSFYGILSLAPLLVLLVAVLG WWVEQSVIEISLVDQIRSVVGAQGAQVVQQALSSAREPSQGIAASLFAFGLLLSGATGVFSELQDAFERLWRQGSGKPPQ QKWWYTASLRLRGVAYILAIGFLLLVSLVVSTLLNLLSGWAGGYWPVEKFAYAINEVASFGFSVALFVALMRMSAGPKPA LRYLVRGAAVGALLFAVGKHLMAFYLSTAAVVSAYGAAGSLVVILMWIYFSSAVLLLAASIARAWADEAREREGVQPRNS S >Mature_320_residues TAETADTKTDTQPANRHLSGLPARGLSWARHRLQHIYRPLRRAVDQWIEADGLRMSAAMSFYGILSLAPLLVLLVAVLGW WVEQSVIEISLVDQIRSVVGAQGAQVVQQALSSAREPSQGIAASLFAFGLLLSGATGVFSELQDAFERLWRQGSGKPPQQ KWWYTASLRLRGVAYILAIGFLLLVSLVVSTLLNLLSGWAGGYWPVEKFAYAINEVASFGFSVALFVALMRMSAGPKPAL RYLVRGAAVGALLFAVGKHLMAFYLSTAAVVSAYGAAGSLVVILMWIYFSSAVLLLAASIARAWADEAREREGVQPRNSS
Specific function: Unknown
COG id: COG1295
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34785; Mature: 34654
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAETADTKTDTQPANRHLSGLPARGLSWARHRLQHIYRPLRRAVDQWIEADGLRMSAAM CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SFYGILSLAPLLVLLVAVLGWWVEQSVIEISLVDQIRSVVGAQGAQVVQQALSSAREPSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH GIAASLFAFGLLLSGATGVFSELQDAFERLWRQGSGKPPQQKWWYTASLRLRGVAYILAI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GFLLLVSLVVSTLLNLLSGWAGGYWPVEKFAYAINEVASFGFSVALFVALMRMSAGPKPA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LRYLVRGAAVGALLFAVGKHLMAFYLSTAAVVSAYGAAGSLVVILMWIYFSSAVLLLAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IARAWADEAREREGVQPRNSS HHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAETADTKTDTQPANRHLSGLPARGLSWARHRLQHIYRPLRRAVDQWIEADGLRMSAAM CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SFYGILSLAPLLVLLVAVLGWWVEQSVIEISLVDQIRSVVGAQGAQVVQQALSSAREPSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH GIAASLFAFGLLLSGATGVFSELQDAFERLWRQGSGKPPQQKWWYTASLRLRGVAYILAI HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH GFLLLVSLVVSTLLNLLSGWAGGYWPVEKFAYAINEVASFGFSVALFVALMRMSAGPKPA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LRYLVRGAAVGALLFAVGKHLMAFYLSTAAVVSAYGAAGSLVVILMWIYFSSAVLLLAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IARAWADEAREREGVQPRNSS HHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA