| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pcp [H]
Identifier: 91787406
GI number: 91787406
Start: 1568288
End: 1568932
Strand: Reverse
Name: pcp [H]
Synonym: Bpro_1512
Alternate gene names: 91787406
Gene position: 1568932-1568288 (Counterclockwise)
Preceding gene: 91787408
Following gene: 91787402
Centisome position: 30.17
GC content: 65.74
Gene sequence:
>645_bases GTGCTGCTCACCGGTTTTGATGCGTTTGGCGAAGCCAGGCTGGCTGGCCCCGCACTCAACCCCAGCTGGCTGGCCGTCCA GGCACTGCACGCCACACGCATCGCGGGTCACGAGGTGATTGCGGCACAGTTGCCGACCCGGTTCGACACATCGGTGACGG AACTCATGCGCCTGTTGCGTCTTTACCGGCCAGCGCTTGTGATTTGCGTCGGGCAGGCAGGCGGGCGAAACGCCTTGTCG CTGGAAAGGATCGCCATCAACGTCAACGATGCCCGCATCCCCGACAACGCGGGCATGCAACCCGTCGACACGCCCGTCGT GGCAGGAGGCCCGACGGCCTACTTCAGCACGCTGCCCATCAAGGCCATGCTGCAGGCTCTGCAGGACGCCGGGCTGGCCG CCGAGGTGTCGCAGACAGCGGGCACCTTTGTCTGCAACCACGCGTTTTATGCACTGATGCACGCGCTGGCCACGCAGCGC GGCTTCAGGCGCACGCGCGGTGGCTTCGTCCATGTGCCTTACCTGCCGGAACAAGGCGCGCCCAGCCTGCCGCTGGAAGA CATGGTGCACGGGCTGCAAGTGGCGATAGCCGCTGCGCTGGCAACGCCGAACGACATCACAAAAAGCGCGGGCGCAGTCA GCTAG
Upstream 100 bases:
>100_bases ACCCACCGCGCAACGGGGAGCGCCATTTCGCAGACCACAGCGATACACCCCAGCCATACTTCACAATGGCAACATGGACA CAGCCTCCACCCCTCCCCGC
Downstream 100 bases:
>100_bases GTCGGCGGCGTCGGGCTGCCCCGCTGCTCCGGCGCATCGGCGGCGGGGTCATTGCGCATCAGCCGCCAGGCCAGCCAGAT GCCGATGGCCGCATTGCCGA
Product: pyroglutamyl-peptidase I
Products: NA
Alternate protein names: 5-oxoprolyl-peptidase; Pyroglutamyl-peptidase I; PGP-I; Pyrase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLLTGFDAFGEARLAGPALNPSWLAVQALHATRIAGHEVIAAQLPTRFDTSVTELMRLLRLYRPALVICVGQAGGRNALS LERIAINVNDARIPDNAGMQPVDTPVVAGGPTAYFSTLPIKAMLQALQDAGLAAEVSQTAGTFVCNHAFYALMHALATQR GFRRTRGGFVHVPYLPEQGAPSLPLEDMVHGLQVAIAAALATPNDITKSAGAVS
Sequences:
>Translated_214_residues MLLTGFDAFGEARLAGPALNPSWLAVQALHATRIAGHEVIAAQLPTRFDTSVTELMRLLRLYRPALVICVGQAGGRNALS LERIAINVNDARIPDNAGMQPVDTPVVAGGPTAYFSTLPIKAMLQALQDAGLAAEVSQTAGTFVCNHAFYALMHALATQR GFRRTRGGFVHVPYLPEQGAPSLPLEDMVHGLQVAIAAALATPNDITKSAGAVS >Mature_214_residues MLLTGFDAFGEARLAGPALNPSWLAVQALHATRIAGHEVIAAQLPTRFDTSVTELMRLLRLYRPALVICVGQAGGRNALS LERIAINVNDARIPDNAGMQPVDTPVVAGGPTAYFSTLPIKAMLQALQDAGLAAEVSQTAGTFVCNHAFYALMHALATQR GFRRTRGGFVHVPYLPEQGAPSLPLEDMVHGLQVAIAAALATPNDITKSAGAVS
Specific function: Removes 5-oxoproline from various penultimate amino acid residues except L-proline [H]
COG id: COG2039
COG function: function code O; Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000816 - InterPro: IPR016125 [H]
Pfam domain/function: PF01470 Peptidase_C15 [H]
EC number: =3.4.19.3 [H]
Molecular weight: Translated: 22533; Mature: 22533
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS01333 PYRASE_GLU ; PS01334 PYRASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTGFDAFGEARLAGPALNPSWLAVQALHATRIAGHEVIAAQLPTRFDTSVTELMRLLR CEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHH LYRPALVICVGQAGGRNALSLERIAINVNDARIPDNAGMQPVDTPVVAGGPTAYFSTLPI HHCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCH KAMLQALQDAGLAAEVSQTAGTFVCNHAFYALMHALATQRGFRRTRGGFVHVPYLPEQGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC PSLPLEDMVHGLQVAIAAALATPNDITKSAGAVS CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC >Mature Secondary Structure MLLTGFDAFGEARLAGPALNPSWLAVQALHATRIAGHEVIAAQLPTRFDTSVTELMRLLR CEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHH LYRPALVICVGQAGGRNALSLERIAINVNDARIPDNAGMQPVDTPVVAGGPTAYFSTLPI HHCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCCHHHHHCCH KAMLQALQDAGLAAEVSQTAGTFVCNHAFYALMHALATQRGFRRTRGGFVHVPYLPEQGA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC PSLPLEDMVHGLQVAIAAALATPNDITKSAGAVS CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA