The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787400

Identifier: 91787400

GI number: 91787400

Start: 1561588

End: 1562973

Strand: Direct

Name: 91787400

Synonym: Bpro_1506

Alternate gene names: NA

Gene position: 1561588-1562973 (Clockwise)

Preceding gene: 91787399

Following gene: 91787401

Centisome position: 30.03

GC content: 62.19

Gene sequence:

>1386_bases
ATGACCAAATTGCAAGCCACCAGGATCGAGGCGCTAAAAGGAAATTTCAAGGGGCAAGTGATTCTCCCCGACGACGATCT
TTACGAAAGCGCCCGCAAAGTCTGGAACGCGACGATCGACAAGCATCCAGCGCTGATTGCGCGCTGCGCCACCACGTCGG
ACGTCGTTGGCGCGGTGAACTTCGCGAAGGATAACGGCCTCGTGCTCGCCGTTCGTGGCGGCGGGCACAACATAGCGGGC
AGTGCGTTGTGCGACGACGGTATCATCATTGACCTCTCGCAGATGAAGGCCGCGCACGTTGATGCCGGTTCGCTCCGGGG
AACTATCGAGGGCGGCGCCACGCTCGCGGACTTCGATGCCGCTACCCAGGCTCACGGCCTGGCCCTACCGCTCGGCATCA
ACTCCACCACCGGTGTCGCGGGTCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGTCGCAAATACGGCATGACCATTGAC
AACCTTGAGTCTGCCGAGGTGGTCACCGCAGCCGGCGAGGTGGTGCGCGCCAGCGCGACCGAACACCCCGACCTCTTCTG
GGCGCTGCGGGGCGGTAGCGGCAATTTCGGCGTTGTTACCCGCTTTGAGTTTCGACTCCACCCTGTCGGACCGAACGTTC
TGAGCGGCCTGATTGTTTACCCGCTTTCCGAGGCGAAGGCGGTGCTGCAGCAGTACCGCGAATTCATGGCGAAGGCGCCG
GACGAACTCTCGGTATGGGTCGTCCTGCGCCAGGCGCCGCCTCTGCCCTTCCTCTCCGAAAAGGTCCACGGCAAGGAGAT
CATTGCGCTGGCGTTGCTCTACGCGGGTGACCCCAAGCAAGGTGAGTCGCTTATCGAGCCGCTGCGCAAGTTCGGCACTC
CCCTGGGCGAGCACGTCGGCGTGCAACCGTACACCGCCTGGCAACAGGCTTTCGACCCGCTGCTCACCCCCGGCGCACGC
AATTACTGGAAGTCGCACAATTTCTCGGTGCTCGACGACGGGCTGTTCGAAGCCGTCATTGAGTACATCAAGAAGCTGCC
GTCGCCCCAGTGCGAGATTTTCTTTGGCGCCATCGGCGGCGCGACGATGCGGCCAGCGCCTGATTCGTCCGCGTACGCCC
ACCGTGACGCCCGGTTTGTGATGAACGTCCACGGCCGTTGGACCGATCCGGCCGACGATGAGCGCTGCATAGGCTGGGCA
CGCGACTATTTCAAGGCATCTGCACCCTTCGCCAGCGGCGGCGTTTACGTCAATTTCCTTACTGCTGACGAGGGTGATCG
CGTGAAAGCTGCCTATGGCCAGAACTACGATCGCCTTGCCCAGATCAAGCGCAAGTATGACCCTACGAACCTCTTCAGCA
CGAACCAGAATATTAAGCCCGCCTGA

Upstream 100 bases:

>100_bases
CAGGGCGACAGGTGCCGCATGGGGAAGATGTTCGGAGTCGCCCAAACCGCTATTGTGAGTCGGGCGCCGCCAGCCCTACA
GTACAACCAGGGAGTAAGCC

Downstream 100 bases:

>100_bases
TTCTTGGCACTGCTATCCACGCCGCGTGGCGCATCAGAAGTACGCGCCATCCGGCGTCGGCGCATCGGCCCTGCGTTGCG
GGTTGGCCGGGAAGTGCTGA

Product: FAD linked oxidase-like protein

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGGHNIAG
SALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTID
NLESAEVVTAAGEVVRASATEHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP
DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLLTPGAR
NYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWA
RDYFKASAPFASGGVYVNFLTADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA

Sequences:

>Translated_461_residues
MTKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGGHNIAG
SALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTID
NLESAEVVTAAGEVVRASATEHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP
DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLLTPGAR
NYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWA
RDYFKASAPFASGGVYVNFLTADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA
>Mature_460_residues
TKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGGHNIAGS
ALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTIDN
LESAEVVTAAGEVVRASATEHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAPD
ELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLLTPGARN
YWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWAR
DYFKASAPFASGGVYVNFLTADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 49803; Mature: 49672

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVN
CCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHEEEE
FAKDNGLVLAVRGGGHNIAGSALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDA
EECCCCEEEEEECCCCCCCCCEEECCCEEEEHHHCCHHHCCCCCCCEEECCCCEEECCCH
ATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTIDNLESAEVVTAAGEVVRASAT
HHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
EHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP
CCCCEEEEEECCCCCEEEEEEEEEEEECCCHHHHCCEEEEECHHHHHHHHHHHHHHHCCC
DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVG
CCEEEEEEEECCCCCCHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHCC
VQPYTAWQQAFDPLLTPGARNYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGG
CCCHHHHHHHHHHHCCCCCHHHHCCCCCCEECCHHHHHHHHHHHHCCCCCEEEEEEECCC
ATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWARDYFKASAPFASGGVYVNFL
CCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE
TADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA
ECCCCCEEEHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC
>Mature Secondary Structure 
TKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVN
CCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHEEEE
FAKDNGLVLAVRGGGHNIAGSALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDA
EECCCCEEEEEECCCCCCCCCEEECCCEEEEHHHCCHHHCCCCCCCEEECCCCEEECCCH
ATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTIDNLESAEVVTAAGEVVRASAT
HHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC
EHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP
CCCCEEEEEECCCCCEEEEEEEEEEEECCCHHHHCCEEEEECHHHHHHHHHHHHHHHCCC
DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVG
CCEEEEEEEECCCCCCHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHCC
VQPYTAWQQAFDPLLTPGARNYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGG
CCCHHHHHHHHHHHCCCCCHHHHCCCCCCEECCHHHHHHHHHHHHCCCCCEEEEEEECCC
ATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWARDYFKASAPFASGGVYVNFL
CCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE
TADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA
ECCCCCEEEHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]