Click here to switch to the map view.

The map label for this gene is yecS [H]

Identifier: 91787397

GI number: 91787397

Start: 1558838

End: 1559476

Strand: Direct

Name: yecS [H]

Synonym: Bpro_1503

Alternate gene names: 91787397

Gene position: 1558838-1559476 (Clockwise)

Preceding gene: 91787396

Following gene: 91787398

Centisome position: 29.98

GC content: 59.31

Gene sequence:

>639_bases
ATGGTTCAGTTTTCACTCTGGGATATTTTTACCTTTCTGCTGGGGGCCATGCGCTGGACCGTGCTGCTCTCGCTCATTGC
CTTCGTAGGCGGTGGGCTGGGGGGCATGGCCCTGCTGTTGCTGCGTTTCACGCGGGTGCGGGGCGTGGAAACGGCGGTGG
CCTGGTATGTGCAAATTTTCCAGGGCACGCCGCTGCTGATGCAGCTCTTCCTGGTGTACTTTGGCCTGGCCCTGATGGGC
ATGGACACCTCTGCTCTGGTGTCTGCGGCGATTTGCCTTACTTTGTATGCCAGCGCCTACCTCACCGAGATTTGGCGCGG
ATGCGTGAACGCCATCCACAAAGGGCAATGGGAAGCCTCAACCAGCCTGGCCCTGAGCTATACGCAGCAGATGCGCCATG
TGATCCTGCCGCAGGCATGGCGCGTGGCGATTGCGCCCACGGTGGGCTTTCTGGTCCAGATCATCAAGGGCACGGCCCTG
GCCTCTGTTATCGGCTTTGTGGAGTTAACCAAGGCCGGTCAGATGATCTCCAACGCCACCTACCAACCCTTTCTGGCCTT
TACTTTTGTGGGCCTTTTGTACTTTGCCCTGTGTTACCCGCTGTCGTGGTGGAGCCAGCGGCTGGAAAACCGCCCATGA

Upstream 100 bases:

>100_bases
GTCACCGTGGCCTACGTGCTGCTGGCCATTGGCCTGCGGCAATCGCTGTACTGGCTCGGTCCGCGCTTCATCTTTGCGAG
CCGCTAAATAGCGCACACCC

Downstream 100 bases:

>100_bases
GTAACGCACCCACCCCCGCCTTTGCCCTGGTCGACATCCGTGGCCTGCACAAGCGTTTCGGATCCACCGAAGTGCTCAAG
GGCATCGATCTGCAGATCCG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MVQFSLWDIFTFLLGAMRWTVLLSLIAFVGGGLGGMALLLLRFTRVRGVETAVAWYVQIFQGTPLLMQLFLVYFGLALMG
MDTSALVSAAICLTLYASAYLTEIWRGCVNAIHKGQWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTAL
ASVIGFVELTKAGQMISNATYQPFLAFTFVGLLYFALCYPLSWWSQRLENRP

Sequences:

>Translated_212_residues
MVQFSLWDIFTFLLGAMRWTVLLSLIAFVGGGLGGMALLLLRFTRVRGVETAVAWYVQIFQGTPLLMQLFLVYFGLALMG
MDTSALVSAAICLTLYASAYLTEIWRGCVNAIHKGQWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTAL
ASVIGFVELTKAGQMISNATYQPFLAFTFVGLLYFALCYPLSWWSQRLENRP
>Mature_212_residues
MVQFSLWDIFTFLLGAMRWTVLLSLIAFVGGGLGGMALLLLRFTRVRGVETAVAWYVQIFQGTPLLMQLFLVYFGLALMG
MDTSALVSAAICLTLYASAYLTEIWRGCVNAIHKGQWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTAL
ASVIGFVELTKAGQMISNATYQPFLAFTFVGLLYFALCYPLSWWSQRLENRP

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=36.2745098039216, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=32.0754716981132, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87082239, Length=217, Percent_Identity=30.8755760368664, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788645, Length=203, Percent_Identity=30.5418719211823, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786874, Length=189, Percent_Identity=26.984126984127, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788646, Length=151, Percent_Identity=31.7880794701987, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787086, Length=189, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=25.9615384615385, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994930, Length=86, Percent_Identity=37.2093023255814, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787087, Length=187, Percent_Identity=24.5989304812834, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23579; Mature: 23579

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQFSLWDIFTFLLGAMRWTVLLSLIAFVGGGLGGMALLLLRFTRVRGVETAVAWYVQIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFLVYFGLALMGMDTSALVSAAICLTLYASAYLTEIWRGCVNAIHKGQWEAS
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQMISNAT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YQPFLAFTFVGLLYFALCYPLSWWSQRLENRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVQFSLWDIFTFLLGAMRWTVLLSLIAFVGGGLGGMALLLLRFTRVRGVETAVAWYVQIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFLVYFGLALMGMDTSALVSAAICLTLYASAYLTEIWRGCVNAIHKGQWEAS
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
TSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQMISNAT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YQPFLAFTFVGLLYFALCYPLSWWSQRLENRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]