| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787341
Identifier: 91787341
GI number: 91787341
Start: 1497481
End: 1498371
Strand: Reverse
Name: 91787341
Synonym: Bpro_1447
Alternate gene names: NA
Gene position: 1498371-1497481 (Counterclockwise)
Preceding gene: 91787343
Following gene: 91787340
Centisome position: 28.81
GC content: 65.1
Gene sequence:
>891_bases ATGCCTGACCTGCTCTCCCCGACAGCCCGCGCCGACAGTCCCGCCGATGCCTTTGGTGCACAACGTGCCGAGGCGATTTA CGACCTGGGTCACAGCACCATCTTCGCGTCGCGCAGCGACCCGCGCTTTTCCTACTGCACCTACGCGCCGCCCACGTCGG GCAATGAGCAGCATCCCAAGGCCTTGGTCGTGGTCGTGCATGGCACGGGCCGCGCATTCACCGAATACCGCGATGCGTTT GCCGAATTTGCCAAATGGAACGACTGCATCGTGCTGTGCCCGCTGTTTCCCGCCGGACCCCAAGGCGACGGCAACCGCGA CGGCTTCAAACACCTGCAGGAGGCCGACATCCGCTACGACCGGATTTTGCTGGATATGGTGGACGAAGTCGCCACCAAGT TCCGCGCTGATTTTTCCAGATTCGCGCTGTTCGGCTATTCGGGCGGCGGCCAGTTCGTCAACCGCTTTGGCCTGCTGCAT CCAGAGCGCCTGTGGGCGCTGTCGATCGGCGCGCCGGGTTCGGTCACCCTGCTGGATTTCAACCAGGACTGGTGGGTCGG CGTGCGCGACTTTGCCCGCCAATTCGGCCAGCCGCTGAACCTGGATGCGCTGAAAGCCTTGCCGGTACACATGGTGGCGG GCAAGGCCGATGTGGAAACCTGGGAAATCACCCACCAGGCAGGCGGCAAGTTCTTCATGCCCGGCGCCAACGATGCCGGG CGCACCCGGCCGGAGCGGCTGGAAACCCTGCGCAAGTCCTTCGAGGCGGCGGGCGTGCAGGTGCACCTGGATCTGGTGGA CAACGTGCCGCACAACGGCCTGGCCTGCGTGGACAAGGTGCAGGACTTCTTTGCCGCCACGCTGCGGCGCCTGCGGACGG CCAGCCGCTAG
Upstream 100 bases:
>100_bases GCTCACCAACCTGTTGTTTGACATGCAATTGTGCTAATGCGCGGCGCTGTCCAGTGCAGGTTTATGGCCCTTATGGCCCT TTCTTTTAGCCTGACTATTT
Downstream 100 bases:
>100_bases GCGGCCCCAGTCACTTCACCATTTCACCACTTCAGCCACTCCACTGACAACGGAAGAGCCATCATGCTGCGTTTTGCGCT GTCCCGTCTCGCCATGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPDLLSPTARADSPADAFGAQRAEAIYDLGHSTIFASRSDPRFSYCTYAPPTSGNEQHPKALVVVVHGTGRAFTEYRDAF AEFAKWNDCIVLCPLFPAGPQGDGNRDGFKHLQEADIRYDRILLDMVDEVATKFRADFSRFALFGYSGGGQFVNRFGLLH PERLWALSIGAPGSVTLLDFNQDWWVGVRDFARQFGQPLNLDALKALPVHMVAGKADVETWEITHQAGGKFFMPGANDAG RTRPERLETLRKSFEAAGVQVHLDLVDNVPHNGLACVDKVQDFFAATLRRLRTASR
Sequences:
>Translated_296_residues MPDLLSPTARADSPADAFGAQRAEAIYDLGHSTIFASRSDPRFSYCTYAPPTSGNEQHPKALVVVVHGTGRAFTEYRDAF AEFAKWNDCIVLCPLFPAGPQGDGNRDGFKHLQEADIRYDRILLDMVDEVATKFRADFSRFALFGYSGGGQFVNRFGLLH PERLWALSIGAPGSVTLLDFNQDWWVGVRDFARQFGQPLNLDALKALPVHMVAGKADVETWEITHQAGGKFFMPGANDAG RTRPERLETLRKSFEAAGVQVHLDLVDNVPHNGLACVDKVQDFFAATLRRLRTASR >Mature_295_residues PDLLSPTARADSPADAFGAQRAEAIYDLGHSTIFASRSDPRFSYCTYAPPTSGNEQHPKALVVVVHGTGRAFTEYRDAFA EFAKWNDCIVLCPLFPAGPQGDGNRDGFKHLQEADIRYDRILLDMVDEVATKFRADFSRFALFGYSGGGQFVNRFGLLHP ERLWALSIGAPGSVTLLDFNQDWWVGVRDFARQFGQPLNLDALKALPVHMVAGKADVETWEITHQAGGKFFMPGANDAGR TRPERLETLRKSFEAAGVQVHLDLVDNVPHNGLACVDKVQDFFAATLRRLRTASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32774; Mature: 32643
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLLSPTARADSPADAFGAQRAEAIYDLGHSTIFASRSDPRFSYCTYAPPTSGNEQHPK CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCCC ALVVVVHGTGRAFTEYRDAFAEFAKWNDCIVLCPLFPAGPQGDGNRDGFKHLQEADIRYD EEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH RILLDMVDEVATKFRADFSRFALFGYSGGGQFVNRFGLLHPERLWALSIGAPGSVTLLDF HHHHHHHHHHHHHHHHCHHHEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCEEEEEEC NQDWWVGVRDFARQFGQPLNLDALKALPVHMVAGKADVETWEITHQAGGKFFMPGANDAG CCCCEECHHHHHHHCCCCCCCHHHHHCCHHEECCCCCCEEEEEEHHCCCEEECCCCCCCC RTRPERLETLRKSFEAAGVQVHLDLVDNVPHNGLACVDKVQDFFAATLRRLRTASR CCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PDLLSPTARADSPADAFGAQRAEAIYDLGHSTIFASRSDPRFSYCTYAPPTSGNEQHPK CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCCC ALVVVVHGTGRAFTEYRDAFAEFAKWNDCIVLCPLFPAGPQGDGNRDGFKHLQEADIRYD EEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH RILLDMVDEVATKFRADFSRFALFGYSGGGQFVNRFGLLHPERLWALSIGAPGSVTLLDF HHHHHHHHHHHHHHHHCHHHEEEEEECCCHHHHHHHCCCCCCCEEEEEECCCCEEEEEEC NQDWWVGVRDFARQFGQPLNLDALKALPVHMVAGKADVETWEITHQAGGKFFMPGANDAG CCCCEECHHHHHHHCCCCCCCHHHHHCCHHEECCCCCCEEEEEEHHCCCEEECCCCCCCC RTRPERLETLRKSFEAAGVQVHLDLVDNVPHNGLACVDKVQDFFAATLRRLRTASR CCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA