| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ordL [H]
Identifier: 91787331
GI number: 91787331
Start: 1486162
End: 1487457
Strand: Reverse
Name: ordL [H]
Synonym: Bpro_1437
Alternate gene names: 91787331
Gene position: 1487457-1486162 (Counterclockwise)
Preceding gene: 91787332
Following gene: 91787323
Centisome position: 28.6
GC content: 66.13
Gene sequence:
>1296_bases ATGTCACAGGAATTCTTTCCCCTCAGTCCGTCCCTGTGGGCCGCCACGGCGGCGCCCGCGCCCGAAACCACCCCGCTGCA AAGCGATGCGAAAGCCGATGTGGTCGTCATCGGCGCGGGCTACTGCGGCTTGAGCACGGCACTGCACCTGGCCGAGCGCG GCGTGCGCGTCGTGGTGCTCGAAGCGCGCGACATCGGCTTCGGCGGCTCTGGCCGCAACGGCGGACAGGTGATTCCGGGC ATGAAGTTCGACCCGAGCGAGCTGATGAAAATGTTCGGACGCGAGAAAGGGCAGCACCTGGTCGATTTTGCCGCCAGCAC GGTCGATGCGGTGTTCAACCTGATCGACAAGCACCGCATGGACGTGCCGCATGTGCGCCGTGGCTGGATTCAGGGCTCGC ACACGCCGGCCGCGCTCAAAATGGCCGAGCGGCGCGTGCGCGATTGGGGTGCGCAGGGTGTCGCCGCGCAGTTGCTGGAC CGGGCTGAGACGGCCCGCCTGCTGGGCACCGACAAATACCTGGGCGGCTGGATGGACCCACGCGGCGGCGGTGTACAGCC GCTGAGCTACGTGCGCGGCCTGGCGCGCGCTGCGATCGCAGCGGGCGTGGTCATTCAAACTGACAGCCCCGCGGCGCAAC TGCTGCAAGACCAGGGCCAGTGGCAGGTCGTGACCGCAGGCGGCGCCAGGGTCAGCGCCGAGCGCGTGGTGCTCTGCACC AACGGTTACACCGATGGGTTATGGCCGCAGCTTAGCAAATCGATCATCAACGCCAACTCGTTCCAGGTCGCGACCGAGCC GCTTCCCGAAGCTGTCCGCAGGAGCATCCTGCCTGAAGGACATGTCTCTTCCGATGCACGCAACCTCTTGCTCTATTACC GAATTGACCACAGCGGCCGTTTGTTGATGGGAGGACGCGGAACCTTTAGGGAGCCCGATCCAGCCCTGCCCGGCAACTGG TCGCATCTGCAGAACGTGATCGGCAAGCTGTTCCCGCAGGCGGCCGGGATGCCGATTGCTTACCGCTGGTGCGGGCATGT CGCCATCACGCGCGACTACCTGCCGCACCTGCATGAGCCCGCGCCGGGCTTGCTGATCGACATCGGCTGCCAGGGGCGCG GCGTCGGCCTGCAGACGCGCATGGGGCAGGCACTGGCCGAGTACATCGCCACCGGCGACAAACAGGCACTGCCCGTCGCG CCATCGACGATCAAGCCATTTCCGCTGTACGGGTTGAGGCGCCTGTACGTCTCGGCGGTAATCGGATGGTACCGAATGAC CGACGGCGGCGTTTAG
Upstream 100 bases:
>100_bases GTCGAGCAGGGACCGTCCAGGGAGGTTCTGAACAATCCTCAAAACCCGCGCACGCAGGACTTCCTGCGACGTGTTCTCTA CCCCATGTAAAGCGCCAAAC
Downstream 100 bases:
>100_bases GGATTCTTGACGATGCTCGGAAAAGGACTCAGGAGTCACTTACTCGGCCCCCAGCTTCTAAACCAGGAAAGCAAGGGACA ACTTACCATGAGGTGGCGAC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MSQEFFPLSPSLWAATAAPAPETTPLQSDAKADVVVIGAGYCGLSTALHLAERGVRVVVLEARDIGFGGSGRNGGQVIPG MKFDPSELMKMFGREKGQHLVDFAASTVDAVFNLIDKHRMDVPHVRRGWIQGSHTPAALKMAERRVRDWGAQGVAAQLLD RAETARLLGTDKYLGGWMDPRGGGVQPLSYVRGLARAAIAAGVVIQTDSPAAQLLQDQGQWQVVTAGGARVSAERVVLCT NGYTDGLWPQLSKSIINANSFQVATEPLPEAVRRSILPEGHVSSDARNLLLYYRIDHSGRLLMGGRGTFREPDPALPGNW SHLQNVIGKLFPQAAGMPIAYRWCGHVAITRDYLPHLHEPAPGLLIDIGCQGRGVGLQTRMGQALAEYIATGDKQALPVA PSTIKPFPLYGLRRLYVSAVIGWYRMTDGGV
Sequences:
>Translated_431_residues MSQEFFPLSPSLWAATAAPAPETTPLQSDAKADVVVIGAGYCGLSTALHLAERGVRVVVLEARDIGFGGSGRNGGQVIPG MKFDPSELMKMFGREKGQHLVDFAASTVDAVFNLIDKHRMDVPHVRRGWIQGSHTPAALKMAERRVRDWGAQGVAAQLLD RAETARLLGTDKYLGGWMDPRGGGVQPLSYVRGLARAAIAAGVVIQTDSPAAQLLQDQGQWQVVTAGGARVSAERVVLCT NGYTDGLWPQLSKSIINANSFQVATEPLPEAVRRSILPEGHVSSDARNLLLYYRIDHSGRLLMGGRGTFREPDPALPGNW SHLQNVIGKLFPQAAGMPIAYRWCGHVAITRDYLPHLHEPAPGLLIDIGCQGRGVGLQTRMGQALAEYIATGDKQALPVA PSTIKPFPLYGLRRLYVSAVIGWYRMTDGGV >Mature_430_residues SQEFFPLSPSLWAATAAPAPETTPLQSDAKADVVVIGAGYCGLSTALHLAERGVRVVVLEARDIGFGGSGRNGGQVIPGM KFDPSELMKMFGREKGQHLVDFAASTVDAVFNLIDKHRMDVPHVRRGWIQGSHTPAALKMAERRVRDWGAQGVAAQLLDR AETARLLGTDKYLGGWMDPRGGGVQPLSYVRGLARAAIAAGVVIQTDSPAAQLLQDQGQWQVVTAGGARVSAERVVLCTN GYTDGLWPQLSKSIINANSFQVATEPLPEAVRRSILPEGHVSSDARNLLLYYRIDHSGRLLMGGRGTFREPDPALPGNWS HLQNVIGKLFPQAAGMPIAYRWCGHVAITRDYLPHLHEPAPGLLIDIGCQGRGVGLQTRMGQALAEYIATGDKQALPVAP STIKPFPLYGLRRLYVSAVIGWYRMTDGGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=416, Percent_Identity=31.7307692307692, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46451; Mature: 46320
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEFFPLSPSLWAATAAPAPETTPLQSDAKADVVVIGAGYCGLSTALHLAERGVRVVVL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE EARDIGFGGSGRNGGQVIPGMKFDPSELMKMFGREKGQHLVDFAASTVDAVFNLIDKHRM EEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC DVPHVRRGWIQGSHTPAALKMAERRVRDWGAQGVAAQLLDRAETARLLGTDKYLGGWMDP CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC RGGGVQPLSYVRGLARAAIAAGVVIQTDSPAAQLLQDQGQWQVVTAGGARVSAERVVLCT CCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCCEEEEECCCCEECCCEEEEEE NGYTDGLWPQLSKSIINANSFQVATEPLPEAVRRSILPEGHVSSDARNLLLYYRIDHSGR CCCCCCCCHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCE LLMGGRGTFREPDPALPGNWSHLQNVIGKLFPQAAGMPIAYRWCGHVAITRDYLPHLHEP EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHCCEEEEHHHHHCCCCC APGLLIDIGCQGRGVGLQTRMGQALAEYIATGDKQALPVAPSTIKPFPLYGLRRLYVSAV CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH IGWYRMTDGGV HHHHHCCCCCC >Mature Secondary Structure SQEFFPLSPSLWAATAAPAPETTPLQSDAKADVVVIGAGYCGLSTALHLAERGVRVVVL CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEE EARDIGFGGSGRNGGQVIPGMKFDPSELMKMFGREKGQHLVDFAASTVDAVFNLIDKHRM EEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC DVPHVRRGWIQGSHTPAALKMAERRVRDWGAQGVAAQLLDRAETARLLGTDKYLGGWMDP CCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC RGGGVQPLSYVRGLARAAIAAGVVIQTDSPAAQLLQDQGQWQVVTAGGARVSAERVVLCT CCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCCEEEEECCCCEECCCEEEEEE NGYTDGLWPQLSKSIINANSFQVATEPLPEAVRRSILPEGHVSSDARNLLLYYRIDHSGR CCCCCCCCHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCE LLMGGRGTFREPDPALPGNWSHLQNVIGKLFPQAAGMPIAYRWCGHVAITRDYLPHLHEP EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHCCEEEEHHHHHCCCCC APGLLIDIGCQGRGVGLQTRMGQALAEYIATGDKQALPVAPSTIKPFPLYGLRRLYVSAV CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH IGWYRMTDGGV HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]