| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787299
Identifier: 91787299
GI number: 91787299
Start: 1441737
End: 1442771
Strand: Reverse
Name: 91787299
Synonym: Bpro_1404
Alternate gene names: NA
Gene position: 1442771-1441737 (Counterclockwise)
Preceding gene: 91787306
Following gene: 91787298
Centisome position: 27.74
GC content: 62.13
Gene sequence:
>1035_bases ATGACATCAAAAAAACAAGCTGTGACCGTGTATGGCGCCTATGGGCACACCGGGCGATTCGTGGTTTCGGAGTTGCGCAG GCGTGGCTGGACGCCCATCCTCTCCGGACGCGATCCCGGGAAGCTGAGCGCCGTCGGGGCGGAACACCCCGGGCTCGAGG TGCGGCCCGCATCGGTCGATGAGCCTGCCTCGCTCGATCGTGCGCTGATGGGCGCCGTGGCGGTCATCAACTGTGCCGGC CCCTTTGCCAGCACCTCCGCACCCCTGATCGAAGCCGCATTGCGTGCCCGGATTCCCTATCTGGACGTTGCGGCGGAAAT AGAAGCCAACATTGACACCTTCGAGCTGTTCGCTGATCGCGCACGCGAAGGAGGCATCGTGGTGGTGCACGCCATGGCGT TCTACGGCGGGCTGGGTGATCTGTTGGCGACCGCGGCGATGGGCGACTGGACGTCGGCTGATGAAATTTCCATCGCCTAC GGACTTGACAGCTGGAGGCCGACGCCCGGGACATTGGTCGCGGGGCAAGTTTCGAAGCAGCGTCGGGACGGCCGCCGGGT TGTCTTCGCTAACGGAAAAATATCGTATGTCACGGGGGCAGCGCCGGTCGTCGAATGGACGTTTCCCGCGCCAATGGGAA AGCAGCCGGTCATCGCAGAGTTCACCATGGCCGACACCGTGACGATTTCGCGTCACCTGAAGACGCCCGAGATTCGCTCG TACATGACGGTCGCAGCAGTCAAGGACCTGACCGATCCGAATCAGCTGGCGCCGACGGCAAGCGACGAAAGCGGCCGATC ATCACAAACTTTTCTGGTTGAAGTGCTTGTACGCCGAGGAGGCGAGGAGCGCCGGGCAGTTGCCAGCGGGCGAGACATTT ATGCATTCAGCGCTCCTCTCGTCGTGGAGGCGATGGCGCGAGTCGTCAGCGGCCAGGTCAAAACAGCTGGCGTCTTTACC GCTGGAGAGGCATTTGACGCGCGGGACTTCCTGGCATCGCTCTGTCCTGAGCATCTCTCATTGGAAATACGATGA
Upstream 100 bases:
>100_bases ATACCCTTGACACGCTACAGATCTGTACTCTACACTCATTAAAAGAGTACAGATCTGTAGCGTCTTGCGGCAGATGGCTC TCCATCGAAGGGATTCAGTG
Downstream 100 bases:
>100_bases GTTTTCTTCGAGCCCTCTGAAATCCTGAGGAGCGATGCAGGAAAGGGCTCAGGCTGAGCTTGCAAGCCGATGAGCGTTGA GGACGGCGAAGCGTGGTGAA
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: Saccharopine Dehydrogenase Family Protein; Integral Membrane Protein
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTSKKQAVTVYGAYGHTGRFVVSELRRRGWTPILSGRDPGKLSAVGAEHPGLEVRPASVDEPASLDRALMGAVAVINCAG PFASTSAPLIEAALRARIPYLDVAAEIEANIDTFELFADRAREGGIVVVHAMAFYGGLGDLLATAAMGDWTSADEISIAY GLDSWRPTPGTLVAGQVSKQRRDGRRVVFANGKISYVTGAAPVVEWTFPAPMGKQPVIAEFTMADTVTISRHLKTPEIRS YMTVAAVKDLTDPNQLAPTASDESGRSSQTFLVEVLVRRGGEERRAVASGRDIYAFSAPLVVEAMARVVSGQVKTAGVFT AGEAFDARDFLASLCPEHLSLEIR
Sequences:
>Translated_344_residues MTSKKQAVTVYGAYGHTGRFVVSELRRRGWTPILSGRDPGKLSAVGAEHPGLEVRPASVDEPASLDRALMGAVAVINCAG PFASTSAPLIEAALRARIPYLDVAAEIEANIDTFELFADRAREGGIVVVHAMAFYGGLGDLLATAAMGDWTSADEISIAY GLDSWRPTPGTLVAGQVSKQRRDGRRVVFANGKISYVTGAAPVVEWTFPAPMGKQPVIAEFTMADTVTISRHLKTPEIRS YMTVAAVKDLTDPNQLAPTASDESGRSSQTFLVEVLVRRGGEERRAVASGRDIYAFSAPLVVEAMARVVSGQVKTAGVFT AGEAFDARDFLASLCPEHLSLEIR >Mature_343_residues TSKKQAVTVYGAYGHTGRFVVSELRRRGWTPILSGRDPGKLSAVGAEHPGLEVRPASVDEPASLDRALMGAVAVINCAGP FASTSAPLIEAALRARIPYLDVAAEIEANIDTFELFADRAREGGIVVVHAMAFYGGLGDLLATAAMGDWTSADEISIAYG LDSWRPTPGTLVAGQVSKQRRDGRRVVFANGKISYVTGAAPVVEWTFPAPMGKQPVIAEFTMADTVTISRHLKTPEIRSY MTVAAVKDLTDPNQLAPTASDESGRSSQTFLVEVLVRRGGEERRAVASGRDIYAFSAPLVVEAMARVVSGQVKTAGVFTA GEAFDARDFLASLCPEHLSLEIR
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36681; Mature: 36550
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKKQAVTVYGAYGHTGRFVVSELRRRGWTPILSGRDPGKLSAVGAEHPGLEVRPASVD CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCCCEEECCCCC EPASLDRALMGAVAVINCAGPFASTSAPLIEAALRARIPYLDVAAEIEANIDTFELFADR CCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHHH AREGGIVVVHAMAFYGGLGDLLATAAMGDWTSADEISIAYGLDSWRPTPGTLVAGQVSKQ CCCCCEEEEEHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHH RRDGRRVVFANGKISYVTGAAPVVEWTFPAPMGKQPVIAEFTMADTVTISRHLKTPEIRS HCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCEEEEHHCCCCCHHHH YMTVAAVKDLTDPNQLAPTASDESGRSSQTFLVEVLVRRGGEERRAVASGRDIYAFSAPL HHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCHH VVEAMARVVSGQVKTAGVFTAGEAFDARDFLASLCPEHLSLEIR HHHHHHHHHCCCCEECEEEECCCCCCHHHHHHHHCCHHHEEEEC >Mature Secondary Structure TSKKQAVTVYGAYGHTGRFVVSELRRRGWTPILSGRDPGKLSAVGAEHPGLEVRPASVD CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCCCEEECCCCC EPASLDRALMGAVAVINCAGPFASTSAPLIEAALRARIPYLDVAAEIEANIDTFELFADR CCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHHH AREGGIVVVHAMAFYGGLGDLLATAAMGDWTSADEISIAYGLDSWRPTPGTLVAGQVSKQ CCCCCEEEEEHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEECCHHHH RRDGRRVVFANGKISYVTGAAPVVEWTFPAPMGKQPVIAEFTMADTVTISRHLKTPEIRS HCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCEEEEHHCCCCCHHHH YMTVAAVKDLTDPNQLAPTASDESGRSSQTFLVEVLVRRGGEERRAVASGRDIYAFSAPL HHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCHH VVEAMARVVSGQVKTAGVFTAGEAFDARDFLASLCPEHLSLEIR HHHHHHHHHCCCCEECEEEECCCCCCHHHHHHHHCCHHHEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA