| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787293
Identifier: 91787293
GI number: 91787293
Start: 1436624
End: 1437136
Strand: Reverse
Name: 91787293
Synonym: Bpro_1398
Alternate gene names: NA
Gene position: 1437136-1436624 (Counterclockwise)
Preceding gene: 91787294
Following gene: 91787286
Centisome position: 27.64
GC content: 62.96
Gene sequence:
>513_bases TTGGCGCCAAGTGGTCAGCGGAAACCGGCTCCGCTGGTCAACTACACCGGAATACGCACCTCATGCCAAGCTGATTTAAA TTGTTTGGGGGAGTATCATGGTGCGATAGCAGAGACCAGAGAGGCGAGAACTTCCATGAATACGATTCTCAAGACTGCAG TAGCGCTTACCTCAGTGTTCATTCTGCTGGGCCACGCCGAGGCCGCCTCAGAGGAGCCGGCGGAGTCAACCACGAGCGCC GCGCCTGGCGTAGTTGACAAGGTGGGAAATGCGGTCGCGCGAGGCGCAAAAGCCGCTGCCAGCGGCGTCGAGCGTGGGGT GAAGGCAGCAGCTGGCGGGGTCGAGCGCGGAGCGAAGGCCGCTGCCAGCGGCATCGAACGTGGAGCCAAGGCAACGGCCC GCGGAGTCGAGCATGGCGCGAAGGCAACTGCAAGCGCGGCTAGCCGCGTTGCCGGCAAGGTAGGCGGTTCACCCGCCTCT TCACCGGCATCCTCACCCACGACCGACAAATAG
Upstream 100 bases:
>100_bases CATCGCCGCGATAGAGACGGCACGGCTGGGCCGAAACCTGTCCTCTGGTTGATGGAGCGTGTCCCGCACGTTCTCTCCTG TTCAAATTTAAGGCGGAATA
Downstream 100 bases:
>100_bases CGGAACGGTCGCGCGAGTTCAGTCGCACGGGCGCCCAACCCGTCGAGTTCGTGCGGGCCCGGCACCAACGGCGCTCATAT CGCCACCAGCTGCCGCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAPSGQRKPAPLVNYTGIRTSCQADLNCLGEYHGAIAETREARTSMNTILKTAVALTSVFILLGHAEAASEEPAESTTSA APGVVDKVGNAVARGAKAAASGVERGVKAAAGGVERGAKAAASGIERGAKATARGVEHGAKATASAASRVAGKVGGSPAS SPASSPTTDK
Sequences:
>Translated_170_residues MAPSGQRKPAPLVNYTGIRTSCQADLNCLGEYHGAIAETREARTSMNTILKTAVALTSVFILLGHAEAASEEPAESTTSA APGVVDKVGNAVARGAKAAASGVERGVKAAAGGVERGAKAAASGIERGAKATARGVEHGAKATASAASRVAGKVGGSPAS SPASSPTTDK >Mature_169_residues APSGQRKPAPLVNYTGIRTSCQADLNCLGEYHGAIAETREARTSMNTILKTAVALTSVFILLGHAEAASEEPAESTTSAA PGVVDKVGNAVARGAKAAASGVERGVKAAAGGVERGAKAAASGIERGAKATARGVEHGAKATASAASRVAGKVGGSPASS PASSPTTDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16667; Mature: 16536
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSGQRKPAPLVNYTGIRTSCQADLNCLGEYHGAIAETREARTSMNTILKTAVALTSVF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLGHAEAASEEPAESTTSAAPGVVDKVGNAVARGAKAAASGVERGVKAAAGGVERGAKA HHHHCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AASGIERGAKATARGVEHGAKATASAASRVAGKVGGSPASSPASSPTTDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure APSGQRKPAPLVNYTGIRTSCQADLNCLGEYHGAIAETREARTSMNTILKTAVALTSVF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLGHAEAASEEPAESTTSAAPGVVDKVGNAVARGAKAAASGVERGVKAAAGGVERGAKA HHHHCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AASGIERGAKATARGVEHGAKATASAASRVAGKVGGSPASSPASSPTTDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA