The gene/protein map for NC_008209 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 91787286

GI number: 91787286

Start: 1427431

End: 1428297

Strand: Reverse

Name: fliY [H]

Synonym: Bpro_1391

Alternate gene names: 91787286

Gene position: 1428297-1427431 (Counterclockwise)

Preceding gene: 91787293

Following gene: 91787285

Centisome position: 27.47

GC content: 58.48

Gene sequence:

>867_bases
ATGAAGAAAACATTCATTGCACGCATTTTGTGCGCGCTTCTAGCAACGGGGGTCATGCTGCCGGCCGCCAACGCCCAGGC
ATTGCAAACCGTCGAAAAAGACGCCTTGACGATCGCGTTCACCGGGGATATGCCAGGGACTGGCTACCAGGACGGCGCCA
TGATCGGCTACGACGGTGAAATCCTTCAGCGCGTGGCGGAGGCAGTCAAGCTCAAGGTCAAGCCCGCGCTCATGGAGTGG
TCGGGCACCATTGCTTCGGTGCAGGCCAAACGTGTCGACGTGATGGCCGGGACCATGGGCTGGACGGAGCAACGCTCCAA
GATCATGACCTTGAGCGACCCGATCCATTACTTCAAAAACGGCATCACCCAGTCGAGCAAGACCAACTGGTCGCACCTCA
AGGACCTGGAAGGCAAGAAGGTCGGCACGATCACCGGTTTCTCCTTCATCCCCGAGCTTCGGAAAATCACCGGCCTGCAA
CTGACGATGTATGACACATCCGACGCGGCAGTCCGTGATCTGCTTGCCGGCCGCATCGATGCCGTCATCGGCGATCCGCC
TGTCATGCAATACGCCATTTCGCGCAACCCGCAGTGGAAGCTCAAGTTCAACGCCTTTGTTGACAACAATCCGGACTACC
CCCTCCTCACCGGGCTCGGCCAGGTGGTATTTGGCCTGAACAAGGACAACCCGGAACTCGCCAAGGCAGTAAACGCTGAA
ATCGCCAGGCTCTGGCAGAACTGCGACCTGAAGAAGATTGGCGGCAAGTATGGCTTGGTGCAGGACGTCTGGTACGTACC
TGTGGGACAGAACTTCCGTGCCAGCGTAGACCGTCCCGCCGACTGGAAATTGCCGGCCTGCAAGTAA

Upstream 100 bases:

>100_bases
CGTTCAATTTACATGCCAAAGCCTCCTATGACAAGTTGATGACGCTTCATACCATCCACCCGTCAGTTTGAGATTCGTCA
ACCACCACCAGGAGTTCTTC

Downstream 100 bases:

>100_bases
TCCCATCGAAGCATGGATACAGGCGGGCGCTTGCGCGTTTGCCTGTTTCAAACAATTAAATCAAATGAACAACACACTGT
TAAGAGTCGATGGGCTTAAG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKTFIARILCALLATGVMLPAANAQALQTVEKDALTIAFTGDMPGTGYQDGAMIGYDGEILQRVAEAVKLKVKPALMEW
SGTIASVQAKRVDVMAGTMGWTEQRSKIMTLSDPIHYFKNGITQSSKTNWSHLKDLEGKKVGTITGFSFIPELRKITGLQ
LTMYDTSDAAVRDLLAGRIDAVIGDPPVMQYAISRNPQWKLKFNAFVDNNPDYPLLTGLGQVVFGLNKDNPELAKAVNAE
IARLWQNCDLKKIGGKYGLVQDVWYVPVGQNFRASVDRPADWKLPACK

Sequences:

>Translated_288_residues
MKKTFIARILCALLATGVMLPAANAQALQTVEKDALTIAFTGDMPGTGYQDGAMIGYDGEILQRVAEAVKLKVKPALMEW
SGTIASVQAKRVDVMAGTMGWTEQRSKIMTLSDPIHYFKNGITQSSKTNWSHLKDLEGKKVGTITGFSFIPELRKITGLQ
LTMYDTSDAAVRDLLAGRIDAVIGDPPVMQYAISRNPQWKLKFNAFVDNNPDYPLLTGLGQVVFGLNKDNPELAKAVNAE
IARLWQNCDLKKIGGKYGLVQDVWYVPVGQNFRASVDRPADWKLPACK
>Mature_288_residues
MKKTFIARILCALLATGVMLPAANAQALQTVEKDALTIAFTGDMPGTGYQDGAMIGYDGEILQRVAEAVKLKVKPALMEW
SGTIASVQAKRVDVMAGTMGWTEQRSKIMTLSDPIHYFKNGITQSSKTNWSHLKDLEGKKVGTITGFSFIPELRKITGLQ
LTMYDTSDAAVRDLLAGRIDAVIGDPPVMQYAISRNPQWKLKFNAFVDNNPDYPLLTGLGQVVFGLNKDNPELAKAVNAE
IARLWQNCDLKKIGGKYGLVQDVWYVPVGQNFRASVDRPADWKLPACK

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=26.7924528301887, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787085, Length=222, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788649, Length=210, Percent_Identity=25.2380952380952, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788648, Length=212, Percent_Identity=23.5849056603774, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787031, Length=187, Percent_Identity=27.2727272727273, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 31654; Mature: 31654

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFIARILCALLATGVMLPAANAQALQTVEKDALTIAFTGDMPGTGYQDGAMIGYDGE
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEECCCHH
ILQRVAEAVKLKVKPALMEWSGTIASVQAKRVDVMAGTMGWTEQRSKIMTLSDPIHYFKN
HHHHHHHHHEEECCHHHHHCCCCHHHHHHHHEEEEECCCCCHHHHCEEEEECHHHHHHHH
GITQSSKTNWSHLKDLEGKKVGTITGFSFIPELRKITGLQLTMYDTSDAAVRDLLAGRID
CCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
AVIGDPPVMQYAISRNPQWKLKFNAFVDNNPDYPLLTGLGQVVFGLNKDNPELAKAVNAE
HHCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
IARLWQNCDLKKIGGKYGLVQDVWYVPVGQNFRASVDRPADWKLPACK
HHHHHHCCCHHHCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTFIARILCALLATGVMLPAANAQALQTVEKDALTIAFTGDMPGTGYQDGAMIGYDGE
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEECCCHH
ILQRVAEAVKLKVKPALMEWSGTIASVQAKRVDVMAGTMGWTEQRSKIMTLSDPIHYFKN
HHHHHHHHHEEECCHHHHHCCCCHHHHHHHHEEEEECCCCCHHHHCEEEEECHHHHHHHH
GITQSSKTNWSHLKDLEGKKVGTITGFSFIPELRKITGLQLTMYDTSDAAVRDLLAGRID
CCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
AVIGDPPVMQYAISRNPQWKLKFNAFVDNNPDYPLLTGLGQVVFGLNKDNPELAKAVNAE
HHCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
IARLWQNCDLKKIGGKYGLVQDVWYVPVGQNFRASVDRPADWKLPACK
HHHHHHCCCHHHCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]