| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787208
Identifier: 91787208
GI number: 91787208
Start: 1353097
End: 1353573
Strand: Reverse
Name: 91787208
Synonym: Bpro_1312
Alternate gene names: NA
Gene position: 1353573-1353097 (Counterclockwise)
Preceding gene: 91787209
Following gene: 91787207
Centisome position: 26.03
GC content: 61.01
Gene sequence:
>477_bases ATGAAAACCGCCACCATCGATGCCCCGGTTGAGCTGCAAATCAAGCCGCGTCCGCGCTTTCCGCAGCTCAAGCCCTCGCA GCTCGCCCTGGCCGAAGCAAAACGCAATAGCTGGACGGCCATCGTGACAAACGACACCACCGTCGAAGCCCTGCAGTGCG CTGACTTCTGGCCCCTGGTGGCGGACCGCCTTAGTCGCCGCGATCTGATCGAGGTTCAGCCCGAAGATAGCTCGTGGTGG GCCGAGCTGCTGGTCCGCGACTGCGGGCAAAATTATGCCGTACTTGTCCTGTTGCGAAAAATCGATCTGCCGCCACTGCA TCCGCACACGGTGGACGCCTTGCCGGCCGGCCATACCTGCGAATTCTTAGGCCCCGAACGATTGTGGGGAATCCTGCGCG GCAGCGAAGTGCTGCGCGCAGAATTCCAAACCAAAGGTGAGGCGTGCATGTGGATCATTGAGGCCCTGCGATCATGA
Upstream 100 bases:
>100_bases TTGATCCAGGACATTTTGGACACCGAACTTCTGGACCAGAAACTTTGACACCATGTCCCCGCATCTTCAGACTAACAATT ATTTTTGAGGAGTTAGTCGC
Downstream 100 bases:
>100_bases GCCCCTTCAACGACCAGGTCATGCGACACGCGCAGGCGACCGCCATCGCGCACGCCGCTTTGCGCACCCCCGTCGATGCG CTGGCCCGCCAGATCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MKTATIDAPVELQIKPRPRFPQLKPSQLALAEAKRNSWTAIVTNDTTVEALQCADFWPLVADRLSRRDLIEVQPEDSSWW AELLVRDCGQNYAVLVLLRKIDLPPLHPHTVDALPAGHTCEFLGPERLWGILRGSEVLRAEFQTKGEACMWIIEALRS
Sequences:
>Translated_158_residues MKTATIDAPVELQIKPRPRFPQLKPSQLALAEAKRNSWTAIVTNDTTVEALQCADFWPLVADRLSRRDLIEVQPEDSSWW AELLVRDCGQNYAVLVLLRKIDLPPLHPHTVDALPAGHTCEFLGPERLWGILRGSEVLRAEFQTKGEACMWIIEALRS >Mature_158_residues MKTATIDAPVELQIKPRPRFPQLKPSQLALAEAKRNSWTAIVTNDTTVEALQCADFWPLVADRLSRRDLIEVQPEDSSWW AELLVRDCGQNYAVLVLLRKIDLPPLHPHTVDALPAGHTCEFLGPERLWGILRGSEVLRAEFQTKGEACMWIIEALRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17879; Mature: 17879
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTATIDAPVELQIKPRPRFPQLKPSQLALAEAKRNSWTAIVTNDTTVEALQCADFWPLV CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHCCHHHHH ADRLSRRDLIEVQPEDSSWWAELLVRDCGQNYAVLVLLRKIDLPPLHPHTVDALPAGHTC HHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE EFLGPERLWGILRGSEVLRAEFQTKGEACMWIIEALRS CCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MKTATIDAPVELQIKPRPRFPQLKPSQLALAEAKRNSWTAIVTNDTTVEALQCADFWPLV CCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHCCHHHHH ADRLSRRDLIEVQPEDSSWWAELLVRDCGQNYAVLVLLRKIDLPPLHPHTVDALPAGHTC HHHHCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEE EFLGPERLWGILRGSEVLRAEFQTKGEACMWIIEALRS CCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA