| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is prs [H]
Identifier: 91787189
GI number: 91787189
Start: 1334894
End: 1335868
Strand: Reverse
Name: prs [H]
Synonym: Bpro_1293
Alternate gene names: 91787189
Gene position: 1335868-1334894 (Counterclockwise)
Preceding gene: 91787190
Following gene: 91787188
Centisome position: 25.69
GC content: 60.82
Gene sequence:
>975_bases ATGCAAACGCACCACCCCGACTTCATGGTTTTCACCGGCAATGCCAACCCCAGCATGGCCTCCGAGATCGCCCAGCACCT GGGCATTTCACTGGGCGCTGCCCATGTGGGGCGTTTTTCCGACGGTGAGGTCACCGTTGAAATCCAGCAAAACGTGCGGG CCCGTGACGTGTTTGTGGTGCAGTCGACCTGTGCGCCGACCAATGACAACCTGATGGAACTGCTCATCATGGTCGACGCG CTCAAACGGGCCTCGGCCGAGCGCATTGCCGCCGTGATTCCTTATTTCGGCTATGCCCGGCAGGACCGCCGCCCGCGTTC GGCACGCGTGCCGATCACGGCCAAAGTGGTGGCCAACATGCTGCAGGCCGTAGGCGTGTCGCGCGTCCTGACGATGGATC TGCATGCCGACCAGATCCAGGGCTTTTTTGATATTCCGGTGGACAACATTTATGCGTCGCCGGTGCTGCTGGGCGATTTG CGCCAGAAGAATTACACCGACCTGATGGTGGTTTCGCCCGACGTGGGCGGCGTGGTGCGTGCCCGCGCGCTGGCCAAGCA GCTCGGCTGCGACATGGCCATCATCGACAAGCGCCGTCCCAAGGCCAACGTGTCGGAAGTGATGCACGTGATCGGTGATA TCGAAGGCCGCAACTGCGTGATCATGGACGACATGATCGACACGGCCGGCACGCTGGTCAAGGCCGCCGAGGTGCTCAAG GAGCGTGGCGCCCAAAAGGTTTACGCGTATTGCACCCATCCGATTTTCTCGGGCCCGGCCATCTCGCGTATCGCCCAGGG CGACGCGCTCGATGAGGTGGTGATCACCAACACCATTCCCTTGAGCCAGAACGCGCAAACGTGCAAAAAAATTCGCCAGC TTTCCGTGGCACCGCTGATCGCCGAGACGATCCAGCGCATTGCCAAGGGAGAGTCGGTCATGAGTTTGTTTTCGGACCAG GACAACCTGTTCTGA
Upstream 100 bases:
>100_bases TGTTTCCCCGGTGCGTGATGTTGCCGCGCGCAAGTTGATTCGATAAAAAATTTCCGTCGCGTTCAAGTCCTCTTCAAGTT CGATTTCAGCTGGGCCTCAC
Downstream 100 bases:
>100_bases TCTGAAACAAAAAGGTGGCTGCGCAACCCCAGGGGTTGGGCAGCCTTTTTATGTCGGGGTGAGCTGGTCGCGGCCTGCCC CTTAATGGAGAAGATTATGA
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MQTHHPDFMVFTGNANPSMASEIAQHLGISLGAAHVGRFSDGEVTVEIQQNVRARDVFVVQSTCAPTNDNLMELLIMVDA LKRASAERIAAVIPYFGYARQDRRPRSARVPITAKVVANMLQAVGVSRVLTMDLHADQIQGFFDIPVDNIYASPVLLGDL RQKNYTDLMVVSPDVGGVVRARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLK ERGAQKVYAYCTHPIFSGPAISRIAQGDALDEVVITNTIPLSQNAQTCKKIRQLSVAPLIAETIQRIAKGESVMSLFSDQ DNLF
Sequences:
>Translated_324_residues MQTHHPDFMVFTGNANPSMASEIAQHLGISLGAAHVGRFSDGEVTVEIQQNVRARDVFVVQSTCAPTNDNLMELLIMVDA LKRASAERIAAVIPYFGYARQDRRPRSARVPITAKVVANMLQAVGVSRVLTMDLHADQIQGFFDIPVDNIYASPVLLGDL RQKNYTDLMVVSPDVGGVVRARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLK ERGAQKVYAYCTHPIFSGPAISRIAQGDALDEVVITNTIPLSQNAQTCKKIRQLSVAPLIAETIQRIAKGESVMSLFSDQ DNLF >Mature_324_residues MQTHHPDFMVFTGNANPSMASEIAQHLGISLGAAHVGRFSDGEVTVEIQQNVRARDVFVVQSTCAPTNDNLMELLIMVDA LKRASAERIAAVIPYFGYARQDRRPRSARVPITAKVVANMLQAVGVSRVLTMDLHADQIQGFFDIPVDNIYASPVLLGDL RQKNYTDLMVVSPDVGGVVRARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLK ERGAQKVYAYCTHPIFSGPAISRIAQGDALDEVVITNTIPLSQNAQTCKKIRQLSVAPLIAETIQRIAKGESVMSLFSDQ DNLF
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=315, Percent_Identity=48.5714285714286, Blast_Score=305, Evalue=4e-83, Organism=Homo sapiens, GI4506129, Length=315, Percent_Identity=47.9365079365079, Blast_Score=305, Evalue=4e-83, Organism=Homo sapiens, GI84875539, Length=317, Percent_Identity=47.3186119873817, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI28557709, Length=315, Percent_Identity=48.2539682539683, Blast_Score=302, Evalue=2e-82, Organism=Homo sapiens, GI194018537, Length=354, Percent_Identity=35.5932203389831, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI4506133, Length=348, Percent_Identity=35.9195402298851, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=31.5436241610738, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=31.5436241610738, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=31.5436241610738, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=31.5436241610738, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1787458, Length=313, Percent_Identity=64.5367412140575, Blast_Score=421, Evalue=1e-119, Organism=Caenorhabditis elegans, GI25149168, Length=315, Percent_Identity=47.3015873015873, Blast_Score=310, Evalue=9e-85, Organism=Caenorhabditis elegans, GI17554702, Length=315, Percent_Identity=47.3015873015873, Blast_Score=309, Evalue=1e-84, Organism=Caenorhabditis elegans, GI71989924, Length=315, Percent_Identity=47.3015873015873, Blast_Score=308, Evalue=3e-84, Organism=Caenorhabditis elegans, GI17554704, Length=311, Percent_Identity=47.588424437299, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17570245, Length=341, Percent_Identity=34.0175953079179, Blast_Score=202, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320946, Length=312, Percent_Identity=44.8717948717949, Blast_Score=269, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6321776, Length=303, Percent_Identity=45.5445544554455, Blast_Score=268, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6319403, Length=313, Percent_Identity=44.7284345047923, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=43.3673469387755, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=38.5964912280702, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI21355239, Length=321, Percent_Identity=48.2866043613707, Blast_Score=302, Evalue=2e-82, Organism=Drosophila melanogaster, GI45551540, Length=343, Percent_Identity=45.1895043731778, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI24651458, Length=363, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651456, Length=363, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI281362873, Length=363, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651454, Length=363, Percent_Identity=33.3333333333333, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24651462, Length=208, Percent_Identity=36.5384615384615, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI24651464, Length=208, Percent_Identity=36.5384615384615, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI45552010, Length=208, Percent_Identity=36.5384615384615, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 35343; Mature: 35343
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTHHPDFMVFTGNANPSMASEIAQHLGISLGAAHVGRFSDGEVTVEIQQNVRARDVFVV CCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEE QSTCAPTNDNLMELLIMVDALKRASAERIAAVIPYFGYARQDRRPRSARVPITAKVVANM ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHH LQAVGVSRVLTMDLHADQIQGFFDIPVDNIYASPVLLGDLRQKNYTDLMVVSPDVGGVVR HHHHCHHHEEEEECCHHHHCCEEECCHHHHCCCCHHHHHHCCCCCCEEEEECCCCCHHHH ARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLK HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH ERGAQKVYAYCTHPIFSGPAISRIAQGDALDEVVITNTIPLSQNAQTCKKIRQLSVAPLI HCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH AETIQRIAKGESVMSLFSDQDNLF HHHHHHHHCCHHHHHHHCCCCCCC >Mature Secondary Structure MQTHHPDFMVFTGNANPSMASEIAQHLGISLGAAHVGRFSDGEVTVEIQQNVRARDVFVV CCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCEEEEEEE QSTCAPTNDNLMELLIMVDALKRASAERIAAVIPYFGYARQDRRPRSARVPITAKVVANM ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHH LQAVGVSRVLTMDLHADQIQGFFDIPVDNIYASPVLLGDLRQKNYTDLMVVSPDVGGVVR HHHHCHHHEEEEECCHHHHCCEEECCHHHHCCCCHHHHHHCCCCCCEEEEECCCCCHHHH ARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLK HHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHH ERGAQKVYAYCTHPIFSGPAISRIAQGDALDEVVITNTIPLSQNAQTCKKIRQLSVAPLI HCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH AETIQRIAKGESVMSLFSDQDNLF HHHHHHHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]