| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787116
Identifier: 91787116
GI number: 91787116
Start: 1267667
End: 1268884
Strand: Reverse
Name: 91787116
Synonym: Bpro_1219
Alternate gene names: NA
Gene position: 1268884-1267667 (Counterclockwise)
Preceding gene: 91787117
Following gene: 91787115
Centisome position: 24.4
GC content: 57.96
Gene sequence:
>1218_bases ATGCTGATTGACTTCTTCTACACCCTGCGATCCGCCAAATTGCCGGTCTCCGTCAAGGAATACCTGATGCTGCTGGAAGC GCTGGAGGCCGGGGTCGTCGGTCCGAACAGCGGGCAAGACGAAGCCGGTGGCGGTGATCAGGGCGCCTGGAAGATCGACG ACTTCTACTACCTCAGCCGCACGGTACTGGTGAAAGACGAAAAGCACTACGACAAGTTCGACCGCGCCTTCGCCGCCTAC TTCAAGGGCGTGGAGATGATTGCCGATTTCACCAAGGACATTCCGCTGGAATGGCTGCGGAAAAACCTGGAACTCGAACT CAGTCCGGAGGACAAGGCAAAGATCGAAAAGATGGGCTGGGACGAGCTCATGGAAACGCTGAAAAAGCGTTTTGAAGAGC AAAAGGAACGCCACGAAGGCGGCAGCAAGTGGATTGGCACCGGTGGCACCTCGCCCTTTGGCGCGAACGGCTACAACCCG CAGGGCATCCGCATCGGCCAGGAAAAAAGCCGCAATAAAAGCGCGGTCAAAGTCTGGGACCAGCGCGCCTACAAGGACTA CGACGACACCCAGGAGCTGGGCACGCGCAACATCAAGGTGGCGCTGCGCCGCCTGCGCAAGTTTGCCCGCCAGGGCAATG TGGAAGAGCTGGACCTGGACGACACGATACGCTCCACGGCATCCAACGCCGGCTGGCTGGACATCAAGATGGTGCCCGAG CGCCATAACAATGTGAAGGTGCTGCTGCTGATGGACGTGGGCGGCACCATGGACGAACACATCCACCGCGTCGAGGAAAT GTTCTCGGCGGTCAAGGCAGAATTCAAGCACCTGGAGTTCTACTACTTCCACAACTGCGTCTACGACTTCATGTGGAAGA ACAACCGCCGCCGCTTCAGCGAGAAATTCGCGACCTGGGACATCATCCGCAAATACAACAAGGACTACAAGCTGATCTTT GTCGGCGACGCCACCATGAGCCCTTACGAAATATTGCAGCCAGGCGGCAGCGTCGAATACAACAACGAGGAAAGCGGCGC CGAATGGATGCAGCGACTGACCAATGCCTTCCCGAAGTTCGCCTGGATCAATCCCGAGCCGCAGGGCGTGTGGCAATACC GCCAGAGCATCAGCGTGATCCAGCAGCTCGTCAACCAGCGCATGTACCCCCTGACCATCAAGGGACTTGAAGAAGCGATG CGCCTGCTTTCCAAGTAG
Upstream 100 bases:
>100_bases AAGAGCCCCCACGCTTTTCACTTCGTGTAATGCGCTGCCCCCGAGGGGCCGTTTTTCCCTTGGGGCGGCCCGGCGGGAAA ATTCCGCAAGAGGGTTCCCC
Downstream 100 bases:
>100_bases GGCTCAAGTAAACTGGGTGTGTGACCCACCCCAGGACCCGCTGCGCGCGGACGGCCACACCGGCAGGACTGACCACTGCG AGCCTCGCCCTTGTCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSRTVLVKDEKHYDKFDRAFAAY FKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGWDELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNP QGIRIGQEKSRNKSAVKVWDQRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFSEKFATWDIIRKYNKDYKLIF VGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKFAWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAM RLLSK
Sequences:
>Translated_405_residues MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSRTVLVKDEKHYDKFDRAFAAY FKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGWDELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNP QGIRIGQEKSRNKSAVKVWDQRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFSEKFATWDIIRKYNKDYKLIF VGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKFAWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAM RLLSK >Mature_405_residues MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSRTVLVKDEKHYDKFDRAFAAY FKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGWDELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNP QGIRIGQEKSRNKSAVKVWDQRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFSEKFATWDIIRKYNKDYKLIF VGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKFAWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAM RLLSK
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47224; Mature: 47224
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSR CEEEHEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEEE TVLVKDEKHYDKFDRAFAAYFKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGW EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCHHHHHHHCCH DELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNPQGIRIGQEKSRNKSAVKVWD HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCHHCCCCHHHHHHH QRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCEEEEEECCC RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFS CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EKFATWDIIRKYNKDYKLIFVGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKF HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCE AWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAMRLLSK EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCC >Mature Secondary Structure MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSR CEEEHEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEEE TVLVKDEKHYDKFDRAFAAYFKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGW EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCHHHHHHHCCH DELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNPQGIRIGQEKSRNKSAVKVWD HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCHHCCCCHHHHHHH QRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCEEEEEECCC RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFS CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH EKFATWDIIRKYNKDYKLIFVGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKF HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCE AWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAMRLLSK EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA