Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787116

Identifier: 91787116

GI number: 91787116

Start: 1267667

End: 1268884

Strand: Reverse

Name: 91787116

Synonym: Bpro_1219

Alternate gene names: NA

Gene position: 1268884-1267667 (Counterclockwise)

Preceding gene: 91787117

Following gene: 91787115

Centisome position: 24.4

GC content: 57.96

Gene sequence:

>1218_bases
ATGCTGATTGACTTCTTCTACACCCTGCGATCCGCCAAATTGCCGGTCTCCGTCAAGGAATACCTGATGCTGCTGGAAGC
GCTGGAGGCCGGGGTCGTCGGTCCGAACAGCGGGCAAGACGAAGCCGGTGGCGGTGATCAGGGCGCCTGGAAGATCGACG
ACTTCTACTACCTCAGCCGCACGGTACTGGTGAAAGACGAAAAGCACTACGACAAGTTCGACCGCGCCTTCGCCGCCTAC
TTCAAGGGCGTGGAGATGATTGCCGATTTCACCAAGGACATTCCGCTGGAATGGCTGCGGAAAAACCTGGAACTCGAACT
CAGTCCGGAGGACAAGGCAAAGATCGAAAAGATGGGCTGGGACGAGCTCATGGAAACGCTGAAAAAGCGTTTTGAAGAGC
AAAAGGAACGCCACGAAGGCGGCAGCAAGTGGATTGGCACCGGTGGCACCTCGCCCTTTGGCGCGAACGGCTACAACCCG
CAGGGCATCCGCATCGGCCAGGAAAAAAGCCGCAATAAAAGCGCGGTCAAAGTCTGGGACCAGCGCGCCTACAAGGACTA
CGACGACACCCAGGAGCTGGGCACGCGCAACATCAAGGTGGCGCTGCGCCGCCTGCGCAAGTTTGCCCGCCAGGGCAATG
TGGAAGAGCTGGACCTGGACGACACGATACGCTCCACGGCATCCAACGCCGGCTGGCTGGACATCAAGATGGTGCCCGAG
CGCCATAACAATGTGAAGGTGCTGCTGCTGATGGACGTGGGCGGCACCATGGACGAACACATCCACCGCGTCGAGGAAAT
GTTCTCGGCGGTCAAGGCAGAATTCAAGCACCTGGAGTTCTACTACTTCCACAACTGCGTCTACGACTTCATGTGGAAGA
ACAACCGCCGCCGCTTCAGCGAGAAATTCGCGACCTGGGACATCATCCGCAAATACAACAAGGACTACAAGCTGATCTTT
GTCGGCGACGCCACCATGAGCCCTTACGAAATATTGCAGCCAGGCGGCAGCGTCGAATACAACAACGAGGAAAGCGGCGC
CGAATGGATGCAGCGACTGACCAATGCCTTCCCGAAGTTCGCCTGGATCAATCCCGAGCCGCAGGGCGTGTGGCAATACC
GCCAGAGCATCAGCGTGATCCAGCAGCTCGTCAACCAGCGCATGTACCCCCTGACCATCAAGGGACTTGAAGAAGCGATG
CGCCTGCTTTCCAAGTAG

Upstream 100 bases:

>100_bases
AAGAGCCCCCACGCTTTTCACTTCGTGTAATGCGCTGCCCCCGAGGGGCCGTTTTTCCCTTGGGGCGGCCCGGCGGGAAA
ATTCCGCAAGAGGGTTCCCC

Downstream 100 bases:

>100_bases
GGCTCAAGTAAACTGGGTGTGTGACCCACCCCAGGACCCGCTGCGCGCGGACGGCCACACCGGCAGGACTGACCACTGCG
AGCCTCGCCCTTGTCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSRTVLVKDEKHYDKFDRAFAAY
FKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGWDELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNP
QGIRIGQEKSRNKSAVKVWDQRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE
RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFSEKFATWDIIRKYNKDYKLIF
VGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKFAWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAM
RLLSK

Sequences:

>Translated_405_residues
MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSRTVLVKDEKHYDKFDRAFAAY
FKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGWDELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNP
QGIRIGQEKSRNKSAVKVWDQRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE
RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFSEKFATWDIIRKYNKDYKLIF
VGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKFAWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAM
RLLSK
>Mature_405_residues
MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSRTVLVKDEKHYDKFDRAFAAY
FKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGWDELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNP
QGIRIGQEKSRNKSAVKVWDQRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE
RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFSEKFATWDIIRKYNKDYKLIF
VGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKFAWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAM
RLLSK

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47224; Mature: 47224

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSR
CEEEHEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEEE
TVLVKDEKHYDKFDRAFAAYFKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGW
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCHHHHHHHCCH
DELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNPQGIRIGQEKSRNKSAVKVWD
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCHHCCCCHHHHHHH
QRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCEEEEEECCC
RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFS
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EKFATWDIIRKYNKDYKLIFVGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKF
HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCE
AWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAMRLLSK
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MLIDFFYTLRSAKLPVSVKEYLMLLEALEAGVVGPNSGQDEAGGGDQGAWKIDDFYYLSR
CEEEHEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCEEEEEE
TVLVKDEKHYDKFDRAFAAYFKGVEMIADFTKDIPLEWLRKNLELELSPEDKAKIEKMGW
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCHHHHHHHCCH
DELMETLKKRFEEQKERHEGGSKWIGTGGTSPFGANGYNPQGIRIGQEKSRNKSAVKVWD
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCHHCCCCHHHHHHH
QRAYKDYDDTQELGTRNIKVALRRLRKFARQGNVEELDLDDTIRSTASNAGWLDIKMVPE
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHCCCCCEEEEEECCC
RHNNVKVLLLMDVGGTMDEHIHRVEEMFSAVKAEFKHLEFYYFHNCVYDFMWKNNRRRFS
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EKFATWDIIRKYNKDYKLIFVGDATMSPYEILQPGGSVEYNNEESGAEWMQRLTNAFPKF
HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCE
AWINPEPQGVWQYRQSISVIQQLVNQRMYPLTIKGLEEAMRLLSK
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA