| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is adhA [H]
Identifier: 91787098
GI number: 91787098
Start: 1242481
End: 1243470
Strand: Reverse
Name: adhA [H]
Synonym: Bpro_1201
Alternate gene names: 91787098
Gene position: 1243470-1242481 (Counterclockwise)
Preceding gene: 91787100
Following gene: 91787097
Centisome position: 23.91
GC content: 71.82
Gene sequence:
>990_bases ATGTTCGCGATGACCGCCGACCCCGCCGGACGGCGACTGCTGGCGGCCCACAAACCGCTGCCGCCCACCGGCGAGCACGA CCTGCTGGTGCGCGTGCTCGCTTGCGGGGTCTGCCGCACCGACCTGCACATCATCGACGGCGAACTGCCGCCGCGGCGGC CCCAGGTGGTTCCGGGGCATGAGGTGGTCGGGCAGGTGGTCGCCCTGGGCGCCAGGGCCGGGCGGTTCACCGTCGGGCAG CGTGTCGGCATCCCCTGGCTGGGCGGCGCCTGCGGCCGCTGCGCCTTCTGCGCCATGGACCGCGAAAACCTCTGCGACGT TCCGGTGTTCACCGGCTATGACCGCGACGGCGGTTTCGCCGAGTACGCTGCCGCCAACGAGCGTTTCTGCCTGGCCCTGC CGGCGCGCTACGACGACGCCCATGCAGCGCCCTTGCTGTGCGCCGGCCTGATCGGTTTTCGCGCCTGGTGCCTGGCCGGC GCAGACATGCCGCGCCGCCTGGGCCTGTACGGCTTCGGCGCTGCGGCTCACATCATCTGCCAGATCGCCGTGGCCCGGGA GCAGGAAGTGTTCGCCTTCACCCGCGCCGGCGATCAGGCCGGCCAGGATTTTGCCCGCAGCCTGGGCGCCGTGTGGGCCG GCGGTTCCCCGGACGCCGCACCGGCATCGCTGGACGCGGCACTCATCTTCGCGCCTGCGGGCGAACTGGTGCCGGCGGCC CTGGCCGCCACACGCAAGGGCGGGACCGTGGTCTGCGCCGGCATCCACATGAGTACCATCCCCGCCTTCGACTACCGGCT GCTCTGGGGCGAACGGGTACTCAAGTCGGTCGCCAACCTCACGCGCGCCGACGGTGAGGCCTTCTTCCGGCTGCTGGAGG ATTTGCCGCTGCAAACCCATGTGCAGACCTTCGCACTGCGCGACGCCAATGCTGCGGTGCAGGCGCTGCGCGCCGGGGCG GTGAACGGGGCCGCGGTGCTCATTCCCTGA
Upstream 100 bases:
>100_bases CTGCACCGTATTTTCGGCTTGCGCCAGGTCAAGGACAAGCCTGCCAAACCCACCCATGCCGGGGTGGATTGCGTACCATG GTGGCATGTTGCCGACCTCG
Downstream 100 bases:
>100_bases GCTGGGCGCCTGTCGCGCCGGGTCCGCCCACGGTCCGTATCAAACACACCGCTGGACACATCACTGTATTTTTTTGCGGT CCTGGCCATCGCCACAGGCG
Product: putative alcohol dehydrogenase-like protein oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MFAMTADPAGRRLLAAHKPLPPTGEHDLLVRVLACGVCRTDLHIIDGELPPRRPQVVPGHEVVGQVVALGARAGRFTVGQ RVGIPWLGGACGRCAFCAMDRENLCDVPVFTGYDRDGGFAEYAAANERFCLALPARYDDAHAAPLLCAGLIGFRAWCLAG ADMPRRLGLYGFGAAAHIICQIAVAREQEVFAFTRAGDQAGQDFARSLGAVWAGGSPDAAPASLDAALIFAPAGELVPAA LAATRKGGTVVCAGIHMSTIPAFDYRLLWGERVLKSVANLTRADGEAFFRLLEDLPLQTHVQTFALRDANAAVQALRAGA VNGAAVLIP
Sequences:
>Translated_329_residues MFAMTADPAGRRLLAAHKPLPPTGEHDLLVRVLACGVCRTDLHIIDGELPPRRPQVVPGHEVVGQVVALGARAGRFTVGQ RVGIPWLGGACGRCAFCAMDRENLCDVPVFTGYDRDGGFAEYAAANERFCLALPARYDDAHAAPLLCAGLIGFRAWCLAG ADMPRRLGLYGFGAAAHIICQIAVAREQEVFAFTRAGDQAGQDFARSLGAVWAGGSPDAAPASLDAALIFAPAGELVPAA LAATRKGGTVVCAGIHMSTIPAFDYRLLWGERVLKSVANLTRADGEAFFRLLEDLPLQTHVQTFALRDANAAVQALRAGA VNGAAVLIP >Mature_329_residues MFAMTADPAGRRLLAAHKPLPPTGEHDLLVRVLACGVCRTDLHIIDGELPPRRPQVVPGHEVVGQVVALGARAGRFTVGQ RVGIPWLGGACGRCAFCAMDRENLCDVPVFTGYDRDGGFAEYAAANERFCLALPARYDDAHAAPLLCAGLIGFRAWCLAG ADMPRRLGLYGFGAAAHIICQIAVAREQEVFAFTRAGDQAGQDFARSLGAVWAGGSPDAAPASLDAALIFAPAGELVPAA LAATRKGGTVVCAGIHMSTIPAFDYRLLWGERVLKSVANLTRADGEAFFRLLEDLPLQTHVQTFALRDANAAVQALRAGA VNGAAVLIP
Specific function: Unknown
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI87082401, Length=314, Percent_Identity=28.343949044586, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081918, Length=322, Percent_Identity=27.3291925465839, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786518, Length=213, Percent_Identity=30.9859154929577, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI226510992, Length=137, Percent_Identity=32.8467153284672, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788073, Length=172, Percent_Identity=30.8139534883721, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790045, Length=355, Percent_Identity=23.943661971831, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787863, Length=141, Percent_Identity=31.2056737588652, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17562584, Length=340, Percent_Identity=26.1764705882353, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17562582, Length=322, Percent_Identity=25.776397515528, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI71988145, Length=333, Percent_Identity=24.3243243243243, Blast_Score=91, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6323961, Length=142, Percent_Identity=38.7323943661972, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6324486, Length=138, Percent_Identity=37.6811594202899, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6323729, Length=146, Percent_Identity=37.6712328767123, Blast_Score=99, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6319949, Length=198, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319621, Length=137, Percent_Identity=36.4963503649635, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6323980, Length=140, Percent_Identity=36.4285714285714, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR014187 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 34618; Mature: 34618
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAMTADPAGRRLLAAHKPLPPTGEHDLLVRVLACGVCRTDLHIIDGELPPRRPQVVPGH CCEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCH EVVGQVVALGARAGRFTVGQRVGIPWLGGACGRCAFCAMDRENLCDVPVFTGYDRDGGFA HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCH EYAAANERFCLALPARYDDAHAAPLLCAGLIGFRAWCLAGADMPRRLGLYGFGAAAHIIC HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCHHHHHHH QIAVAREQEVFAFTRAGDQAGQDFARSLGAVWAGGSPDAAPASLDAALIFAPAGELVPAA HHHHHCCCCEEEEECCCCHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEEECCCHHHHHH LAATRKGGTVVCAGIHMSTIPAFDYRLLWGERVLKSVANLTRADGEAFFRLLEDLPLQTH HHHCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH VQTFALRDANAAVQALRAGAVNGAAVLIP HHHHHCCCHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MFAMTADPAGRRLLAAHKPLPPTGEHDLLVRVLACGVCRTDLHIIDGELPPRRPQVVPGH CCEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCH EVVGQVVALGARAGRFTVGQRVGIPWLGGACGRCAFCAMDRENLCDVPVFTGYDRDGGFA HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCH EYAAANERFCLALPARYDDAHAAPLLCAGLIGFRAWCLAGADMPRRLGLYGFGAAAHIIC HHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCHHHHHHH QIAVAREQEVFAFTRAGDQAGQDFARSLGAVWAGGSPDAAPASLDAALIFAPAGELVPAA HHHHHCCCCEEEEECCCCHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEEECCCHHHHHH LAATRKGGTVVCAGIHMSTIPAFDYRLLWGERVLKSVANLTRADGEAFFRLLEDLPLQTH HHHCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH VQTFALRDANAAVQALRAGAVNGAAVLIP HHHHHCCCHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]