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The map label for this gene is ocd2 [H]

Identifier: 91787060

GI number: 91787060

Start: 1205115

End: 1206140

Strand: Reverse

Name: ocd2 [H]

Synonym: Bpro_1163

Alternate gene names: 91787060

Gene position: 1206140-1205115 (Counterclockwise)

Preceding gene: 91787061

Following gene: 91787059

Centisome position: 23.19

GC content: 62.67

Gene sequence:

>1026_bases
ATGTCCGACCATAACGTTGACGATACGGCCGAAATCTACCTGACCTATCTGAACCACCCTGACGTGCAGGCATTGGCCCT
GACCGATGCCGAAATCATTGGCGCCGTGGAGCAGGCGCTGCATGCGCAAGGCCTGCAGCAAACCACCATCGAGCCGCGCA
TGCACCTGGTGCCGGAAAAGGATTACCCGGGCCACTTCAATGTGCTGCGCGGCTACATCCGCCCGCTGGGCCTGGCCGGC
GTGAAAGTGGTGGGCGACTTTTACCGCAACTATGAAATCGGCCTGCCGTCGGAGCTGGCGGTGCTCAACCTGTTCAACCC
GAAAAACGGCTCGCCGATCGCCATCATCGACGCCTCCGACATCACCGACATGCGCACCGGCGCCATCACCGCGCTGGGCG
CAAAACACCTGGCGCGCAAGGACTCCAAGGTGCTGGGCCACATCGGCGCACGCGGCACGTCTTACTGGAACGTCCGCCTG
CTCGACTCGATCTACCACTTTGACGAAATCCGCGTTCACTCGCGCCGGCCCGACAGCCGCAATGCCTTTGCCGCGCGGCT
TGAAAAAGACCTGGGCAAGAAAATCACGGTGACGCAAGACTGGGAGTCCTGCGTGCGCGGGGCCGACATCGTGGTGGAGG
CTTCGCGGCTGGAAAAACCCGAGCCCCTGCTCAAGACCGAATGGATCAAGAAGGGCGCCTGCGTGATTCCCTACGGCACC
ATGAGCGCGGTGGAGCTGTCGCTCACCGACATCATGGACAAGATGGTGATGGACGACTGGGGCCAGGCCAAGGCCGGGCC
TTTTGGCGCCCTGCGCGCCCATGTGGACAGCGGCAAGCTGTCGGAAAAAACCCTGCATGCCGAACTGGGGCAAATCGTTG
CGGGCCTCAAACCCGGCCGCCAGAGCGATGAGGAGACCAATCTCTTCTGGCACCGCGGCCTGTCGCTGTCGGACATCGCC
CTCGGCGCGTTCATGCTGGAAAAGGCCAAGCGGATGAACCTCGGGCAACAGCTGCGCTTTCGCTGA

Upstream 100 bases:

>100_bases
GGCCACCGGCGTCATGCGCCATGCGGATGCGGGCTATGAGATCGCCCGCCAGAGCGCCCGAGACAACCACCTGAACCTGC
CCATGATGGGAGCCTGAAAC

Downstream 100 bases:

>100_bases
ATTCCAAAGCGCCCACAACATCCACAACACCGGCATCCCAACATACCGTCACGCCGCCACGCCGCCATGAACGCCATCAG
CACATCACCCGTCGCCTCCC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MSDHNVDDTAEIYLTYLNHPDVQALALTDAEIIGAVEQALHAQGLQQTTIEPRMHLVPEKDYPGHFNVLRGYIRPLGLAG
VKVVGDFYRNYEIGLPSELAVLNLFNPKNGSPIAIIDASDITDMRTGAITALGAKHLARKDSKVLGHIGARGTSYWNVRL
LDSIYHFDEIRVHSRRPDSRNAFAARLEKDLGKKITVTQDWESCVRGADIVVEASRLEKPEPLLKTEWIKKGACVIPYGT
MSAVELSLTDIMDKMVMDDWGQAKAGPFGALRAHVDSGKLSEKTLHAELGQIVAGLKPGRQSDEETNLFWHRGLSLSDIA
LGAFMLEKAKRMNLGQQLRFR

Sequences:

>Translated_341_residues
MSDHNVDDTAEIYLTYLNHPDVQALALTDAEIIGAVEQALHAQGLQQTTIEPRMHLVPEKDYPGHFNVLRGYIRPLGLAG
VKVVGDFYRNYEIGLPSELAVLNLFNPKNGSPIAIIDASDITDMRTGAITALGAKHLARKDSKVLGHIGARGTSYWNVRL
LDSIYHFDEIRVHSRRPDSRNAFAARLEKDLGKKITVTQDWESCVRGADIVVEASRLEKPEPLLKTEWIKKGACVIPYGT
MSAVELSLTDIMDKMVMDDWGQAKAGPFGALRAHVDSGKLSEKTLHAELGQIVAGLKPGRQSDEETNLFWHRGLSLSDIA
LGAFMLEKAKRMNLGQQLRFR
>Mature_340_residues
SDHNVDDTAEIYLTYLNHPDVQALALTDAEIIGAVEQALHAQGLQQTTIEPRMHLVPEKDYPGHFNVLRGYIRPLGLAGV
KVVGDFYRNYEIGLPSELAVLNLFNPKNGSPIAIIDASDITDMRTGAITALGAKHLARKDSKVLGHIGARGTSYWNVRLL
DSIYHFDEIRVHSRRPDSRNAFAARLEKDLGKKITVTQDWESCVRGADIVVEASRLEKPEPLLKTEWIKKGACVIPYGTM
SAVELSLTDIMDKMVMDDWGQAKAGPFGALRAHVDSGKLSEKTLHAELGQIVAGLKPGRQSDEETNLFWHRGLSLSDIAL
GAFMLEKAKRMNLGQQLRFR

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=310, Percent_Identity=27.4193548387097, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI62241008, Length=274, Percent_Identity=28.4671532846715, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 37803; Mature: 37672

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDHNVDDTAEIYLTYLNHPDVQALALTDAEIIGAVEQALHAQGLQQTTIEPRMHLVPEK
CCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCHHCCCCCCEEECCCC
DYPGHFNVLRGYIRPLGLAGVKVVGDFYRNYEIGLPSELAVLNLFNPKNGSPIAIIDASD
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
ITDMRTGAITALGAKHLARKDSKVLGHIGARGTSYWNVRLLDSIYHFDEIRVHSRRPDSR
CCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHEEECCCCCCC
NAFAARLEKDLGKKITVTQDWESCVRGADIVVEASRLEKPEPLLKTEWIKKGACVIPYGT
HHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEEHHHCCCCCCHHHHHHHCCCCEEEECCC
MSAVELSLTDIMDKMVMDDWGQAKAGPFGALRAHVDSGKLSEKTLHAELGQIVAGLKPGR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCC
QSDEETNLFWHRGLSLSDIALGAFMLEKAKRMNLGQQLRFR
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure 
SDHNVDDTAEIYLTYLNHPDVQALALTDAEIIGAVEQALHAQGLQQTTIEPRMHLVPEK
CCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCHHCCCCCCEEECCCC
DYPGHFNVLRGYIRPLGLAGVKVVGDFYRNYEIGLPSELAVLNLFNPKNGSPIAIIDASD
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
ITDMRTGAITALGAKHLARKDSKVLGHIGARGTSYWNVRLLDSIYHFDEIRVHSRRPDSR
CCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHEEECCCCCCC
NAFAARLEKDLGKKITVTQDWESCVRGADIVVEASRLEKPEPLLKTEWIKKGACVIPYGT
HHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEEHHHCCCCCCHHHHHHHCCCCEEEECCC
MSAVELSLTDIMDKMVMDDWGQAKAGPFGALRAHVDSGKLSEKTLHAELGQIVAGLKPGR
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCC
QSDEETNLFWHRGLSLSDIALGAFMLEKAKRMNLGQQLRFR
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]