| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787058
Identifier: 91787058
GI number: 91787058
Start: 1203241
End: 1204212
Strand: Reverse
Name: 91787058
Synonym: Bpro_1161
Alternate gene names: NA
Gene position: 1204212-1203241 (Counterclockwise)
Preceding gene: 91787059
Following gene: 91787057
Centisome position: 23.16
GC content: 68.42
Gene sequence:
>972_bases ATGCGCCGCTTTCGCTTTCTCTTCTTTCTGGTCATCCCGCTGGTGACGGCGGCATCCTTCGGCGTGCTGGCGCAAACCTA TCCGTCCCGGCCGCTGCATGTGATCGTGCCCTTTCCACCCGGCGGACCGACTGACGTGCTGGGCCGCATACTGGCCCAGG GCCTGTCCGAAGCCCTCGGCCAGCCGGCCGTGGTCGACAACAGGGTAGGCGCGGCCGGCAACATCGGCATCGAGCAGGCG GCCAAGGCCCCGCCGGACGGCCACACCCTGGCGATCGTGCCCCTGGGCAATATCGCCGTCAACCCCACGCTGTTTCCCAG CCTGCCGTACAAGGCCTCGGACCTCGCGCCGGTCTCCATGCTGGCCACGGTGGACAACGTGCTGGTGGTGAATGCGGCGG TGCCGGCACGCTCGCTCCGGGAGCTGCTGGCCCTGGCCGCACAGAAGCCGGATGCGCTCTCCTTCGCCTCGCCCGGCGCC GGCAGCCAGGCGCACCTGGCGGGCGAGTTGCTCGCGCTGCAGAGTAACGTGCAGCTGCTCCATGTGCCTTACAAGGGGAT CGGGCCGGCGCTCAACGACCTGCTCGGCGGCCAGGTGTCGATGATGTTCGCGCAGATGTCCTCGGTGCTGCCCCACATCC AGAGCGGCAAACTGCGCGCGCTGGGGGTGGCGAGCCTCAAACGCTCGCCAGTCATGCCTGAAGTCCCGACCCTTGCCGAG CAGGGCCTGGCCCGCTTCGAGGCCGTGTCCTGGTATGCGCTGATGGTGCCCGCCGGCACGCCGCGCCCGGTGATTGACCG CCTCAACGCGGAAACCGCGCGCCTCCTCGCCCGTCCCGAACTGAGAGACAAGCTGGCCGCGCTGGGCATGACGCCGGGTG CCGGCAAACCGTCAGACCTCGCCGCCACGATTCAGGCCGACACCATGCGCTGGGCTGAAGTGATCCGGCAAAAGAACATC AAACCCGAATGA
Upstream 100 bases:
>100_bases AGGGCCTGCTGCTGGCGGGCTTTGCGGTGCCCGACCCCGCCGATTACCAGCCCCTGGCAGTCATGGCCGCTGCGGCCGCC ATCCCTTTCGAGGAGCTCTG
Downstream 100 bases:
>100_bases GGTAATACCGTAATACCCACGCTTCCCGCTGTCACTGCTTGCCAACGAGTCACCATGAACATCCAGCCAGGCTTCTTAAC CTTGACGCAACTGCGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MRRFRFLFFLVIPLVTAASFGVLAQTYPSRPLHVIVPFPPGGPTDVLGRILAQGLSEALGQPAVVDNRVGAAGNIGIEQA AKAPPDGHTLAIVPLGNIAVNPTLFPSLPYKASDLAPVSMLATVDNVLVVNAAVPARSLRELLALAAQKPDALSFASPGA GSQAHLAGELLALQSNVQLLHVPYKGIGPALNDLLGGQVSMMFAQMSSVLPHIQSGKLRALGVASLKRSPVMPEVPTLAE QGLARFEAVSWYALMVPAGTPRPVIDRLNAETARLLARPELRDKLAALGMTPGAGKPSDLAATIQADTMRWAEVIRQKNI KPE
Sequences:
>Translated_323_residues MRRFRFLFFLVIPLVTAASFGVLAQTYPSRPLHVIVPFPPGGPTDVLGRILAQGLSEALGQPAVVDNRVGAAGNIGIEQA AKAPPDGHTLAIVPLGNIAVNPTLFPSLPYKASDLAPVSMLATVDNVLVVNAAVPARSLRELLALAAQKPDALSFASPGA GSQAHLAGELLALQSNVQLLHVPYKGIGPALNDLLGGQVSMMFAQMSSVLPHIQSGKLRALGVASLKRSPVMPEVPTLAE QGLARFEAVSWYALMVPAGTPRPVIDRLNAETARLLARPELRDKLAALGMTPGAGKPSDLAATIQADTMRWAEVIRQKNI KPE >Mature_323_residues MRRFRFLFFLVIPLVTAASFGVLAQTYPSRPLHVIVPFPPGGPTDVLGRILAQGLSEALGQPAVVDNRVGAAGNIGIEQA AKAPPDGHTLAIVPLGNIAVNPTLFPSLPYKASDLAPVSMLATVDNVLVVNAAVPARSLRELLALAAQKPDALSFASPGA GSQAHLAGELLALQSNVQLLHVPYKGIGPALNDLLGGQVSMMFAQMSSVLPHIQSGKLRALGVASLKRSPVMPEVPTLAE QGLARFEAVSWYALMVPAGTPRPVIDRLNAETARLLARPELRDKLAALGMTPGAGKPSDLAATIQADTMRWAEVIRQKNI KPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33967; Mature: 33967
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFRFLFFLVIPLVTAASFGVLAQTYPSRPLHVIVPFPPGGPTDVLGRILAQGLSEALG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC QPAVVDNRVGAAGNIGIEQAAKAPPDGHTLAIVPLGNIAVNPTLFPSLPYKASDLAPVSM CCCEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCEEECCEECCCCCCCCCCCCHHHH LATVDNVLVVNAAVPARSLRELLALAAQKPDALSFASPGAGSQAHLAGELLALQSNVQLL HHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE HVPYKGIGPALNDLLGGQVSMMFAQMSSVLPHIQSGKLRALGVASLKRSPVMPEVPTLAE ECCCHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHH QGLARFEAVSWYALMVPAGTPRPVIDRLNAETARLLARPELRDKLAALGMTPGAGKPSDL HHHHHHHHHEEEEEEECCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC AATIQADTMRWAEVIRQKNIKPE EEEHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRFRFLFFLVIPLVTAASFGVLAQTYPSRPLHVIVPFPPGGPTDVLGRILAQGLSEALG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC QPAVVDNRVGAAGNIGIEQAAKAPPDGHTLAIVPLGNIAVNPTLFPSLPYKASDLAPVSM CCCEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCEEECCEECCCCCCCCCCCCHHHH LATVDNVLVVNAAVPARSLRELLALAAQKPDALSFASPGAGSQAHLAGELLALQSNVQLL HHHHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE HVPYKGIGPALNDLLGGQVSMMFAQMSSVLPHIQSGKLRALGVASLKRSPVMPEVPTLAE ECCCHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHH QGLARFEAVSWYALMVPAGTPRPVIDRLNAETARLLARPELRDKLAALGMTPGAGKPSDL HHHHHHHHHEEEEEEECCCCCHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC AATIQADTMRWAEVIRQKNIKPE EEEHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]