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The map label for this gene is opuCB [H]

Identifier: 91787052

GI number: 91787052

Start: 1196501

End: 1197142

Strand: Reverse

Name: opuCB [H]

Synonym: Bpro_1155

Alternate gene names: 91787052

Gene position: 1197142-1196501 (Counterclockwise)

Preceding gene: 91787053

Following gene: 91787051

Centisome position: 23.02

GC content: 67.76

Gene sequence:

>642_bases
ATGCTGGCCGACACCTGGAACTTCCTGGCGACCCATCCGACCCAGTTCTATCGGGCCCTGGGCGTGCACATTGCCCTGTC
AGGGTCAGCGCTGTTTTTGGCCGCGCTGATCAGCATACCTGCCGGTATTGCCGTGGCGCGGCGTGGCGGCCTGGCGCTGG
CCGTGGTCAACGCGGCGAATGTCGGACGCACCTTGCCGTCGCTGGCCGTGCTCGCGCTGGTCATGCCGCTTCTGGGGACC
GGCTTTGCGCCTGCGCTGTTCGCCCTGACGCTGATCGCGCTGCCGCCCATCGTGACCCACACCATCGTCGGCATGCGTGG
CGTGGACGCCGATGCCGTCGACGCGGCGGTTGGCATGGGCATGACGCGGACCCTGCTGTTGCGGCAGGTCGAACTGCCGA
TGGCCCTGCCGGTCATCTTTGCGGGCCTGCGCACTGGCGCGGTGCAGGTGATTTCCGGGGCGGTGCTGGCGGCCTTTATT
GGCGGCGGCGGGCTTGGCGACTTCATCACCGCGGGCATTGCCATGATGGCCATCCCCCAACTGCTGGTGGGCGCCATCCC
GGTGACCCTGCTGGCGCTGGGCACTGATTTTCTTTTTGGCGCCTTGCAGCGCCGCATGACCCCTCAGGGCCTTCGCGCAT
GA

Upstream 100 bases:

>100_bases
CTTGACCGCGTGCGCCCTGGCGGTCAGCGTCGACCTGCTGCTTGCACTGCTCGAGCGGCAGCTCAAACGCCGGCGCGCGG
CCTGAACCCCCAGGAAAAAA

Downstream 100 bases:

>100_bases
TCACACTCGACCGCCTCACCAAGAGCTTCGGAACCAGCGGCCAGACGGCCGTCGACGGACTGTCGCTCACCATCAATGCG
GGCGAAATCTGCGTGCTGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLADTWNFLATHPTQFYRALGVHIALSGSALFLAALISIPAGIAVARRGGLALAVVNAANVGRTLPSLAVLALVMPLLGT
GFAPALFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMGMTRTLLLRQVELPMALPVIFAGLRTGAVQVISGAVLAAFI
GGGGLGDFITAGIAMMAIPQLLVGAIPVTLLALGTDFLFGALQRRMTPQGLRA

Sequences:

>Translated_213_residues
MLADTWNFLATHPTQFYRALGVHIALSGSALFLAALISIPAGIAVARRGGLALAVVNAANVGRTLPSLAVLALVMPLLGT
GFAPALFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMGMTRTLLLRQVELPMALPVIFAGLRTGAVQVISGAVLAAFI
GGGGLGDFITAGIAMMAIPQLLVGAIPVTLLALGTDFLFGALQRRMTPQGLRA
>Mature_213_residues
MLADTWNFLATHPTQFYRALGVHIALSGSALFLAALISIPAGIAVARRGGLALAVVNAANVGRTLPSLAVLALVMPLLGT
GFAPALFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMGMTRTLLLRQVELPMALPVIFAGLRTGAVQVISGAVLAAFI
GGGGLGDFITAGIAMMAIPQLLVGAIPVTLLALGTDFLFGALQRRMTPQGLRA

Specific function: Involved in a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine and choline; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788449, Length=187, Percent_Identity=37.9679144385027, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788451, Length=213, Percent_Identity=37.5586854460094, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1789033, Length=177, Percent_Identity=31.638418079096, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 21682; Mature: 21682

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADTWNFLATHPTQFYRALGVHIALSGSALFLAALISIPAGIAVARRGGLALAVVNAAN
CCCCCCHHHHCCHHHHHHHHHHHEEECCHHHHHHHHHHHCCHHHHHHCCCEEEEEEEHHH
VGRTLPSLAVLALVMPLLGTGFAPALFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
MTRTLLLRQVELPMALPVIFAGLRTGAVQVISGAVLAAFIGGGGLGDFITAGIAMMAIPQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLVGAIPVTLLALGTDFLFGALQRRMTPQGLRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLADTWNFLATHPTQFYRALGVHIALSGSALFLAALISIPAGIAVARRGGLALAVVNAAN
CCCCCCHHHHCCHHHHHHHHHHHEEECCHHHHHHHHHHHCCHHHHHHCCCEEEEEEEHHH
VGRTLPSLAVLALVMPLLGTGFAPALFALTLIALPPIVTHTIVGMRGVDADAVDAAVGMG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
MTRTLLLRQVELPMALPVIFAGLRTGAVQVISGAVLAAFIGGGGLGDFITAGIAMMAIPQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLVGAIPVTLLALGTDFLFGALQRRMTPQGLRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]