Click here to switch to the map view.

The map label for this gene is visC [H]

Identifier: 91787023

GI number: 91787023

Start: 1163407

End: 1164528

Strand: Reverse

Name: visC [H]

Synonym: Bpro_1125

Alternate gene names: 91787023

Gene position: 1164528-1163407 (Counterclockwise)

Preceding gene: 91787027

Following gene: 91787022

Centisome position: 22.39

GC content: 65.86

Gene sequence:

>1122_bases
ATGTCCAAGCCCTTTGATGTCTGTATTCGCGGCGACGGTGTGGTGGGTCGCACCCTGGCCTTGCTGCTGGCGCGCGAGCG
TTTGCGCGTGGCGCTGGTCACCAGGCCCGACAGGGCGCCCGCAGCGCAGGCCGCAGCCGATGTGCGCGCGTACGCGCTGA
ACAGCGCCTCCCGGCGGGTGCTGGAAACCCTGCGGGCCTGGCCCGATACGCCTTTTGCAACACCCGTTCTGGAGATGCAG
GTGTGGGGAGACGATGGCGGCAAGCTGGATTTCACGGCGCAAAGCCTGGACGCTGGCGAAACAGAACGGGCACTGGCCTG
GATCGTCGACGTACCAGCACTGGAGGAGCAACTGATCCAGGCGGTGCGCTACCAACCCCAGATTGAACTGGTGGAGGCGC
CAGTCAAAGCCGCCCTCACCGTGGTCTGTGAAGGTCAAAAGAGTCGCAGCCGCGATGAATTTGGCGCGCACTGGACCGTC
AAGCCCTACCCCCAAAAAGCCATCGCCGCCCGGCTCGACTCGGACAAACCCCATGGCGGCATCGCCCGCCAATGGTTTGC
CCATGGCGACATCCTGGCCCTTTTGCCTTTATCTGGCGCGGCAGGGACCTCTGTGGCACTGGTGTGGTCTGTGCCTGTTG
AGCGTGCGGGCGAGCTGGAAAAACTGCCACCGGAGCAATTCTGCGCCGCCCTGCAAGCCGTCTGCGGCCAGGAAGCGGGT
ACCTTGCGTTTGACGAGCGAGCGGGCCAGTTGGCCCCTGGCGCTCTCCAATGCAGCGCACTGGGTTGGGCCGGGCTGGGC
ACTTGCGGGCGATGCGGCACATACCGTGCACCCGCTGGCCGGGCAGGGCCTGAACCTGGGCCTGGCCGACGCAGAAGCGC
TTGCCAGGGTGATTTCGGAGCGTGAGTACTGGCGCGGACTGGGTGATGAAAAACTGCTGCGCCGCTACGAGAGGGCACGC
AAGGCAGACGTGGCCGCCATGGACGCCGTGACCGATGGCCTGCACGGACTCTTTGCGCAAACCGACGGGCGCTGGCAGGC
GTTGCGCAACTGGGGCATGAAGGGGTTTGCCCGGAGCGCCCTCCTGAAGAACTGGGTTGCGCGGCGGGCCGCAGGTAAAT
GA

Upstream 100 bases:

>100_bases
TCGTGAATGCCTGCTGCCTCCCGCCTGCGCCAGCCCGCTGTTCGCCAGCCGGCCAGCCCTGCATAAACCGTCAATTCTGC
ACTGCCTTCTAAAATGAGGA

Downstream 100 bases:

>100_bases
CGTTGCGGAAACAACCGGAACCAACCGGACCAAATCGGAACAAACAGGATCACGCGGGAAAAACATGAAATTCTTAAAAA
CAATCGCCGTCATGGGCCTG

Product: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSKPFDVCIRGDGVVGRTLALLLARERLRVALVTRPDRAPAAQAAADVRAYALNSASRRVLETLRAWPDTPFATPVLEMQ
VWGDDGGKLDFTAQSLDAGETERALAWIVDVPALEEQLIQAVRYQPQIELVEAPVKAALTVVCEGQKSRSRDEFGAHWTV
KPYPQKAIAARLDSDKPHGGIARQWFAHGDILALLPLSGAAGTSVALVWSVPVERAGELEKLPPEQFCAALQAVCGQEAG
TLRLTSERASWPLALSNAAHWVGPGWALAGDAAHTVHPLAGQGLNLGLADAEALARVISEREYWRGLGDEKLLRRYERAR
KADVAAMDAVTDGLHGLFAQTDGRWQALRNWGMKGFARSALLKNWVARRAAGK

Sequences:

>Translated_373_residues
MSKPFDVCIRGDGVVGRTLALLLARERLRVALVTRPDRAPAAQAAADVRAYALNSASRRVLETLRAWPDTPFATPVLEMQ
VWGDDGGKLDFTAQSLDAGETERALAWIVDVPALEEQLIQAVRYQPQIELVEAPVKAALTVVCEGQKSRSRDEFGAHWTV
KPYPQKAIAARLDSDKPHGGIARQWFAHGDILALLPLSGAAGTSVALVWSVPVERAGELEKLPPEQFCAALQAVCGQEAG
TLRLTSERASWPLALSNAAHWVGPGWALAGDAAHTVHPLAGQGLNLGLADAEALARVISEREYWRGLGDEKLLRRYERAR
KADVAAMDAVTDGLHGLFAQTDGRWQALRNWGMKGFARSALLKNWVARRAAGK
>Mature_372_residues
SKPFDVCIRGDGVVGRTLALLLARERLRVALVTRPDRAPAAQAAADVRAYALNSASRRVLETLRAWPDTPFATPVLEMQV
WGDDGGKLDFTAQSLDAGETERALAWIVDVPALEEQLIQAVRYQPQIELVEAPVKAALTVVCEGQKSRSRDEFGAHWTVK
PYPQKAIAARLDSDKPHGGIARQWFAHGDILALLPLSGAAGTSVALVWSVPVERAGELEKLPPEQFCAALQAVCGQEAGT
LRLTSERASWPLALSNAAHWVGPGWALAGDAAHTVHPLAGQGLNLGLADAEALARVISEREYWRGLGDEKLLRRYERARK
ADVAAMDAVTDGLHGLFAQTDGRWQALRNWGMKGFARSALLKNWVARRAAGK

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967307, Length=258, Percent_Identity=31.0077519379845, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI32967305, Length=257, Percent_Identity=30.3501945525292, Blast_Score=94, Evalue=3e-19,
Organism=Escherichia coli, GI1789273, Length=379, Percent_Identity=32.1899736147757, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1789274, Length=397, Percent_Identity=29.9748110831234, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786883, Length=397, Percent_Identity=27.455919395466, Blast_Score=115, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI25146631, Length=272, Percent_Identity=27.9411764705882, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19920760, Length=435, Percent_Identity=28.2758620689655, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40447; Mature: 40315

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPFDVCIRGDGVVGRTLALLLARERLRVALVTRPDRAPAAQAAADVRAYALNSASRRV
CCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LETLRAWPDTPFATPVLEMQVWGDDGGKLDFTAQSLDAGETERALAWIVDVPALEEQLIQ
HHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEHHCCCCCCHHHHEEEEECCCHHHHHHHH
AVRYQPQIELVEAPVKAALTVVCEGQKSRSRDEFGAHWTVKPYPQKAIAARLDSDKPHGG
HHHCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHCCEEECCCCCHHHHHHHCCCCCCCCC
IARQWFAHGDILALLPLSGAAGTSVALVWSVPVERAGELEKLPPEQFCAALQAVCGQEAG
HHHHHHCCCCEEEEEECCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCC
TLRLTSERASWPLALSNAAHWVGPGWALAGDAAHTVHPLAGQGLNLGLADAEALARVISE
EEEEECCCCCCCEEECCCCCCCCCCCEECCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHH
REYWRGLGDEKLLRRYERARKADVAAMDAVTDGLHGLFAQTDGRWQALRNWGMKGFARSA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH
LLKNWVARRAAGK
HHHHHHHHHHCCC
>Mature Secondary Structure 
SKPFDVCIRGDGVVGRTLALLLARERLRVALVTRPDRAPAAQAAADVRAYALNSASRRV
CCCCEEEEECCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LETLRAWPDTPFATPVLEMQVWGDDGGKLDFTAQSLDAGETERALAWIVDVPALEEQLIQ
HHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEHHCCCCCCHHHHEEEEECCCHHHHHHHH
AVRYQPQIELVEAPVKAALTVVCEGQKSRSRDEFGAHWTVKPYPQKAIAARLDSDKPHGG
HHHCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHCCEEECCCCCHHHHHHHCCCCCCCCC
IARQWFAHGDILALLPLSGAAGTSVALVWSVPVERAGELEKLPPEQFCAALQAVCGQEAG
HHHHHHCCCCEEEEEECCCCCCCCEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHCCCCC
TLRLTSERASWPLALSNAAHWVGPGWALAGDAAHTVHPLAGQGLNLGLADAEALARVISE
EEEEECCCCCCCEEECCCCCCCCCCCEECCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHH
REYWRGLGDEKLLRRYERARKADVAAMDAVTDGLHGLFAQTDGRWQALRNWGMKGFARSA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH
LLKNWVARRAAGK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]